BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006653
         (1768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19236.3| unnamed protein product [Vitis vinifera]              420   e-115
gb|AEV41134.1| D2/4-type cyclin [Populus x canadensis]                413   e-113
emb|CAN80526.1| hypothetical protein VITISV_030539 [Vitis vinifera]   408   e-111
ref|XP_002514014.1| cyclin d, putative [Ricinus communis] gi|223...   404   e-110
emb|CAN88854.1| D2/4-type cyclin [Populus trichocarpa]                400   e-109

>emb|CBI19236.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  420 bits (1079), Expect = e-115
 Identities = 223/361 (61%), Positives = 270/361 (74%), Gaps = 8/361 (2%)
 Frame = -3

Query: 1517 MAPSFDCTSSSLLFCAEDNNSLMCFDDSDNGVVG-----AINYEENIC--XXXXXXXXXX 1359
            MAPSFDC +SSLL C EDN+S+  FDD+D G        A +++ +              
Sbjct: 1    MAPSFDCAASSLL-CGEDNSSI--FDDADYGAAAEEFETAWHHQNHRSRNQEKSFNGGEF 57

Query: 1358 XXXXXXXSEECVGLMVEKESEHMPRRDYLTRLKXXXXXXXLRMEAVEWISKVHAHYSFGP 1179
                   S+EC+ LM+EKES+H+P  DYL RL+        R + V WI+K HAH+ FGP
Sbjct: 58   LIGLPVQSDECLALMIEKESQHLPAADYLMRLRSGDLDIGSRQDVVGWIAKAHAHFGFGP 117

Query: 1178 LSVYLSINYLDRFLSAYELPKGKAWMMQLLAVACLSLAAKMEEIDVPLSLDLQVCESKFI 999
            L  YL+INYLDRFLS YELPKGKAWM QLLAVACLSLAAKMEE +VPL LDLQV ES+F+
Sbjct: 118  LCAYLAINYLDRFLSTYELPKGKAWMAQLLAVACLSLAAKMEENEVPLCLDLQVAESRFV 177

Query: 998  FEARTIQRMELLVLSTLNWRMQAITPFSFMDYFLWKFNDDQPPLRSSISQSVDIILSTLK 819
            FEARTIQRMELLVL TL WRMQA+TPFSF+DYFL + NDD+ P R+SI  S+ +ILST+K
Sbjct: 178  FEARTIQRMELLVLRTLKWRMQAVTPFSFVDYFLRRINDDEFPARTSILLSIQLILSTVK 237

Query: 818  GIEHLNFRPSEVAAAVAISVLRETQTVDVDKATSCIIQHVEKERVLKCIKLLQDVSLISG 639
            GI+ L FRPSE+AAAVAIS+  ETQTVD++KA S +I+ +EKERVLKCI+L+ D+SLISG
Sbjct: 238  GIDFLEFRPSEIAAAVAISIAGETQTVDIEKAISVVIEPIEKERVLKCIELMHDLSLISG 297

Query: 638  AIK-VTYGASVPSVPQSPIGVLDATCLSYKSDDLTVGSCANSSHSSPEGKRRKLNQPSEV 462
            ++K  +  ASVPSVP +PIGVLDA CLSYKSDD TVGSCANSSH+    K+RKLN P EV
Sbjct: 298  SVKRSSTAASVPSVPHTPIGVLDAACLSYKSDDTTVGSCANSSHN----KKRKLNAPPEV 353

Query: 461  D 459
            +
Sbjct: 354  E 354


>gb|AEV41134.1| D2/4-type cyclin [Populus x canadensis]
          Length = 353

 Score =  413 bits (1062), Expect = e-113
 Identities = 223/359 (62%), Positives = 268/359 (74%), Gaps = 8/359 (2%)
 Frame = -3

Query: 1517 MAPSFDCTSSSLLFCAEDNNSLMCFDDSDNGVVGAINYE-------ENICXXXXXXXXXX 1359
            MAPSFDC  S+LL CAEDNNS+  FDD+D+       +E         IC          
Sbjct: 1    MAPSFDCAVSNLL-CAEDNNSI--FDDNDHYDATVEEFEATWHHGNHQICNQNGGGDGGC 57

Query: 1358 XXXXXXXSEECVGLMVEKESEHMPRRDYLTRLKXXXXXXXLRMEAVEWISKVHAHYSFGP 1179
                    +EC+ LMVEKE +H+P  DYL RL+        R EAV+WI+KVHAH+ FGP
Sbjct: 58   LPMQS---DECLVLMVEKECQHLPNGDYLKRLRNGDLDMGARKEAVDWIAKVHAHFGFGP 114

Query: 1178 LSVYLSINYLDRFLSAYELPKGKAWMMQLLAVACLSLAAKMEEIDVPLSLDLQVCESKFI 999
            L  YLSINYLDRFLSAYELP GK WMMQLLAVACLSLAAKMEE +VPLSLDLQV ES+F+
Sbjct: 115  LCAYLSINYLDRFLSAYELPNGKPWMMQLLAVACLSLAAKMEETEVPLSLDLQVGESRFV 174

Query: 998  FEARTIQRMELLVLSTLNWRMQAITPFSFMDYFLWKFNDDQ-PPLRSSISQSVDIILSTL 822
            FEARTIQRMELLVLSTL+WRMQAITPFSF+DYFL K N+DQ PP +S I QS+ +ILST+
Sbjct: 175  FEARTIQRMELLVLSTLSWRMQAITPFSFIDYFLSKINNDQTPPPKSLILQSIHLILSTI 234

Query: 821  KGIEHLNFRPSEVAAAVAISVLRETQTVDVDKATSCIIQHVEKERVLKCIKLLQDVSLIS 642
            +GI  L FRPSE+AAAVAI+V+ ET+TVD ++A S + Q V+KERVLKC++L+ D+SL  
Sbjct: 235  RGIYFLEFRPSEIAAAVAIAVVGETKTVDAEQAISVLAQPVQKERVLKCLQLIHDLSLFG 294

Query: 641  GAIKVTYGASVPSVPQSPIGVLDATCLSYKSDDLTVGSCANSSHSSPEGKRRKLNQPSE 465
            G++K T  AS+ SVPQSPIGVLDA CLSY S+  TV  CANSSH++P+ KRRKL++P E
Sbjct: 295  GSVKGT-SASLLSVPQSPIGVLDAACLSYSSNHTTVEPCANSSHNTPDAKRRKLDKPCE 352


>emb|CAN80526.1| hypothetical protein VITISV_030539 [Vitis vinifera]
          Length = 375

 Score =  408 bits (1048), Expect = e-111
 Identities = 223/381 (58%), Positives = 270/381 (70%), Gaps = 28/381 (7%)
 Frame = -3

Query: 1517 MAPSFDCTSSSLLFCAEDNNSLMCFDDSDNGVVG-----AINYEENIC--XXXXXXXXXX 1359
            MAPSFDC +SSLL C EDN+S+  FDD+D G        A +++ +              
Sbjct: 1    MAPSFDCAASSLL-CGEDNSSI--FDDADYGAAAEEFETAWHHQNHRSRNQEKSFNGGEF 57

Query: 1358 XXXXXXXSEECVGLMVEKESEHMPRRDYLTRLKXXXXXXXLRMEAVEWISKVHAHYSFGP 1179
                   S+EC+ LM+EKES+H+P  DYL RL+        R + V WI+K HAH+ FGP
Sbjct: 58   LIGLPVQSDECLALMIEKESQHLPAADYLMRLRSGDLDIGSRQDVVGWIAKAHAHFGFGP 117

Query: 1178 LSVYLSINYLDRFLSAYELPKGKAWMMQLLAVACLSLAAKMEEIDVPLSLDLQVCESKFI 999
            L  YL+INYLDRFLS YELPKGKAWM QLLAVACLSLAAKMEE +VPL LDLQV ES+F+
Sbjct: 118  LCAYLAINYLDRFLSTYELPKGKAWMAQLLAVACLSLAAKMEENEVPLCLDLQVAESRFV 177

Query: 998  FEARTIQRMELLVLSTLNWRMQAITPFSFMDYFLWKFNDDQPPLRSSISQSVDIILSTLK 819
            FEARTIQRMELLVL TL WRMQA+TPFSF+DYFL + NDD+ P R+SI  S+ +ILST+K
Sbjct: 178  FEARTIQRMELLVLRTLKWRMQAVTPFSFVDYFLRRINDDEFPARTSILLSIQLILSTVK 237

Query: 818  --------------------GIEHLNFRPSEVAAAVAISVLRETQTVDVDKATSCIIQHV 699
                                GI+ L FRPSE+AAAVAIS+  ETQTVD++KA S +I+ +
Sbjct: 238  VMKIEKCERSDVSWLGELNAGIDFLEFRPSEIAAAVAISIAGETQTVDIEKAISVVIEPI 297

Query: 698  EKERVLKCIKLLQDVSLISGAIK-VTYGASVPSVPQSPIGVLDATCLSYKSDDLTVGSCA 522
            EKERVLKCI+L+ D+SLISG++K  +  ASVPSVP +PIGVLDA CLSYKSDD TVGSCA
Sbjct: 298  EKERVLKCIELMHDLSLISGSVKRSSTAASVPSVPHTPIGVLDAACLSYKSDDTTVGSCA 357

Query: 521  NSSHSSPEGKRRKLNQPSEVD 459
            NSSH+    K+RKLN P EV+
Sbjct: 358  NSSHN----KKRKLNAPPEVE 374


>ref|XP_002514014.1| cyclin d, putative [Ricinus communis] gi|223547100|gb|EEF48597.1|
            cyclin d, putative [Ricinus communis]
          Length = 354

 Score =  404 bits (1038), Expect = e-110
 Identities = 217/359 (60%), Positives = 262/359 (72%), Gaps = 8/359 (2%)
 Frame = -3

Query: 1517 MAPSFDCTSSSLLFCAEDNNSLM--------CFDDSDNGVVGAINYEENICXXXXXXXXX 1362
            MAPSFDC  SSLL CAEDN S+         C+ D  +   G+ ++  +           
Sbjct: 1    MAPSFDCAVSSLL-CAEDNISIFDDDNNKDYCYGDVVDEFEGSWHHGNH---RINHQDRG 56

Query: 1361 XXXXXXXXSEECVGLMVEKESEHMPRRDYLTRLKXXXXXXXLRMEAVEWISKVHAHYSFG 1182
                    SEEC+ LMVEKE +H+P  DYL RL+        R EA++WI KVHAH+ FG
Sbjct: 57   FDVSLPMLSEECLRLMVEKECQHLPNADYLKRLRRGELDLGARKEAIDWIGKVHAHFGFG 116

Query: 1181 PLSVYLSINYLDRFLSAYELPKGKAWMMQLLAVACLSLAAKMEEIDVPLSLDLQVCESKF 1002
            PLS YLSINYLDRFLSAYELPKGK WMMQLLAVACLS+AAKMEE +VP+ LDLQV ES+F
Sbjct: 117  PLSAYLSINYLDRFLSAYELPKGKDWMMQLLAVACLSIAAKMEETEVPIFLDLQVGESRF 176

Query: 1001 IFEARTIQRMELLVLSTLNWRMQAITPFSFMDYFLWKFNDDQPPLRSSISQSVDIILSTL 822
            +FEARTIQRMELLVLSTL+WRM+AITPFSF+D FL K N+D+ P  S I QS+ +ILS +
Sbjct: 177  VFEARTIQRMELLVLSTLSWRMKAITPFSFIDDFLNKINNDENPPTSLILQSIQLILSII 236

Query: 821  KGIEHLNFRPSEVAAAVAISVLRETQTVDVDKATSCIIQHVEKERVLKCIKLLQDVSLIS 642
            KGI+ L FRPSEVAAAV I+V+ E +TVD ++A   + QH++KE+VLKC +L+QD SLI 
Sbjct: 237  KGIDFLEFRPSEVAAAVTIAVVGEIRTVDAEQAIFVLSQHIQKEKVLKCFQLIQDFSLIG 296

Query: 641  GAIKVTYGASVPSVPQSPIGVLDATCLSYKSDDLTVGSCANSSHSSPEGKRRKLNQPSE 465
            GAIK T    + SVPQSPIGVLDA CLSY+SD+ TVGSCANSS  +PE KR+KLN+P E
Sbjct: 297  GAIKDT-NVRILSVPQSPIGVLDAACLSYRSDESTVGSCANSSQDTPEAKRKKLNKPWE 354


>emb|CAN88854.1| D2/4-type cyclin [Populus trichocarpa]
          Length = 361

 Score =  400 bits (1028), Expect = e-109
 Identities = 221/368 (60%), Positives = 266/368 (72%), Gaps = 20/368 (5%)
 Frame = -3

Query: 1517 MAPSFDCTSSSLLFCAEDNNSLMCFDDSDNGVVGAINYE-------ENICXXXXXXXXXX 1359
            MAPSFDC  S+LL CAEDNNS+  FDD+D+       +E         IC          
Sbjct: 1    MAPSFDCAVSNLL-CAEDNNSI--FDDNDHYDATVEEFEATWHHGNHQICNQNGGGDGGC 57

Query: 1358 XXXXXXXSEECVGLMVEKESEHMPRRDYLTRLKXXXXXXXLRMEAVEWISK--------- 1206
                    +EC+ LMVEKE +H+P  DYL RL+        R EAV+WI+K         
Sbjct: 58   LPMQS---DECLVLMVEKECQHLPNGDYLKRLRNGDLDMGARKEAVDWIAKAGSFFFLFF 114

Query: 1205 ---VHAHYSFGPLSVYLSINYLDRFLSAYELPKGKAWMMQLLAVACLSLAAKMEEIDVPL 1035
               VHAH+ FGPL  YLSINYLDRFLSAYELP GK WMMQLLAVACLSLAAKMEE +VPL
Sbjct: 115  FTIVHAHFGFGPLCAYLSINYLDRFLSAYELPNGKPWMMQLLAVACLSLAAKMEETEVPL 174

Query: 1034 SLDLQVCESKFIFEARTIQRMELLVLSTLNWRMQAITPFSFMDYFLWKFNDDQ-PPLRSS 858
            SLDLQV ES+F+FEARTIQRMELLVLSTL+WRMQAITPFSF+DYFL K N+DQ PP +S 
Sbjct: 175  SLDLQVGESRFVFEARTIQRMELLVLSTLSWRMQAITPFSFIDYFLSKINNDQTPPPKSL 234

Query: 857  ISQSVDIILSTLKGIEHLNFRPSEVAAAVAISVLRETQTVDVDKATSCIIQHVEKERVLK 678
            I QS+ +ILST++GI  L FRPSE+AAAVAI+V+ ET+TVD ++A S + Q V+KERVLK
Sbjct: 235  ILQSIHLILSTIRGIYFLEFRPSEIAAAVAIAVVGETKTVDAEQAISVLAQPVQKERVLK 294

Query: 677  CIKLLQDVSLISGAIKVTYGASVPSVPQSPIGVLDATCLSYKSDDLTVGSCANSSHSSPE 498
            C++L+ D+SL  G++K T  AS+ SVPQSPIGVLDA CLSY S+  TV  CANSSH++P+
Sbjct: 295  CLQLIHDLSLFGGSVKGT-SASLLSVPQSPIGVLDAACLSYSSNHTTVEPCANSSHNTPD 353

Query: 497  GKRRKLNQ 474
             KRRKL++
Sbjct: 354  AKRRKLDK 361