BLASTX nr result

ID: Coptis21_contig00006644 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006644
         (1488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635535.1| PREDICTED: uncharacterized protein LOC100854...   514   e-143
ref|XP_002265978.2| PREDICTED: snRNA-activating protein complex ...   461   e-127
ref|XP_003529686.1| PREDICTED: snRNA-activating protein complex ...   441   e-121
ref|XP_004145452.1| PREDICTED: uncharacterized protein LOC101221...   434   e-119
gb|AFK34824.1| unknown [Medicago truncatula]                          422   e-115

>ref|XP_003635535.1| PREDICTED: uncharacterized protein LOC100854109 [Vitis vinifera]
          Length = 443

 Score =  514 bits (1323), Expect = e-143
 Identities = 256/435 (58%), Positives = 311/435 (71%), Gaps = 5/435 (1%)
 Frame = +2

Query: 47   VPRGGPIYHPDLVSPLTRTSEFETSVVIELQSLFSQLHTNNNRQDEDISVNELKILSEED 226
            VPRGGPIY PD V P+TR  EF TSVV  LQ L +++   +   DE +SV+ELKI +EE+
Sbjct: 17   VPRGGPIYVPDFVGPITRVPEFLTSVVQHLQDLEAEI---SQAHDEVLSVDELKIFTEEE 73

Query: 227  LVEIASKEI-----DSQIHTSLQTTTAEENNXXXXXXXXXXXXXXQFDRDTRAAELENPS 391
            LV+ A KE       +Q  + L    +                    DR+  + E    S
Sbjct: 74   LVDKAFKEAFKDSEGAQHSSQLSDENSNAGGERDCRNSNKRKRREMIDRNDFSVE---DS 130

Query: 392  FVGKIEEVANIKEKQDEDRVAVKLHSFSGGGGKGNEVSVPLVENIGKMMSLKFITSSTKI 571
            +  K++++A IK KQDED+ A +LHSF G   K NE ++P  E I ++  L+ I+S TK+
Sbjct: 131  YTAKVQQLAEIKHKQDEDKAAARLHSFDGSC-KINECALPSSEKIERIKYLRSISSVTKV 189

Query: 572  RKLSNASEHIPIPYPEVILCVEVYKMSKIWVKTQEFLVLGSQMLSELRDQIYCLTDHLMQ 751
             K SN   H+   Y + +LC+E+Y   + WVK QEFLVLG Q L+ELRD I C TD +MQ
Sbjct: 190  -KSSNIHGHVMEHYEDAVLCIEIYHSRRTWVKAQEFLVLGRQTLTELRDNICCATDQVMQ 248

Query: 752  KAGEHDPSGYFLIEDVFCNDKRDPSAIDYSDPIFEWLKKSKDEACEKWECILSGELQQKQ 931
            KAG+H+PSGY LIEDVFCND RDPSAIDYS PIF+WL+ SKD+A EKWECI+SGELQQKQ
Sbjct: 249  KAGKHNPSGYILIEDVFCNDLRDPSAIDYSKPIFDWLRNSKDDALEKWECIISGELQQKQ 308

Query: 932  RALLGHATTPHLPQFKVVDMHKIRFCDLWFRVGAGYLYCHQGDCKHIIVIRDMRLIHPED 1111
            +ALLG  T   LP FK VDMHK RFCDL FR+GAGYLYCHQGDC+H IVIRDMRL HPED
Sbjct: 309  KALLGDPTISRLPHFKAVDMHKTRFCDLQFRLGAGYLYCHQGDCRHTIVIRDMRLFHPED 368

Query: 1112 VQNRAAYPVLTFQHKNRFRKCSVCKVYRATKVTIDDKWAQENPCYFCDNCYYLLHYTEDG 1291
            V +RAAYP+LTFQ K+R +KC VCK+YRATKVT+DDKWA ENPCYFCDNCY+LLHY+EDG
Sbjct: 369  VGDRAAYPILTFQLKSRVQKCCVCKIYRATKVTVDDKWAPENPCYFCDNCYFLLHYSEDG 428

Query: 1292 SLLYHEFTVYDYHHE 1336
            SLLY EF+VYDYHHE
Sbjct: 429  SLLYKEFSVYDYHHE 443


>ref|XP_002265978.2| PREDICTED: snRNA-activating protein complex subunit 3-like, partial
            [Vitis vinifera]
          Length = 315

 Score =  461 bits (1186), Expect = e-127
 Identities = 213/316 (67%), Positives = 254/316 (80%)
 Frame = +2

Query: 389  SFVGKIEEVANIKEKQDEDRVAVKLHSFSGGGGKGNEVSVPLVENIGKMMSLKFITSSTK 568
            S+  K++++A IK KQDED+ A +LHSF G   K NE ++P  E I ++  L+ I+S TK
Sbjct: 2    SYTAKVQQLAEIKHKQDEDKAAARLHSFDGSC-KINECALPSSEKIERIKYLRSISSVTK 60

Query: 569  IRKLSNASEHIPIPYPEVILCVEVYKMSKIWVKTQEFLVLGSQMLSELRDQIYCLTDHLM 748
            + K SN   H+   Y + +LC+E+Y   + WVK QEFLVLG Q L+ELRD I C TD +M
Sbjct: 61   V-KSSNIHGHVMEHYEDAVLCIEIYHSRRTWVKAQEFLVLGRQTLTELRDNICCATDQVM 119

Query: 749  QKAGEHDPSGYFLIEDVFCNDKRDPSAIDYSDPIFEWLKKSKDEACEKWECILSGELQQK 928
            QKAG+H+PSGY LIEDVFCND RDPSAIDYS PIF+WL+ SKD+A EKWECI+SG+LQQK
Sbjct: 120  QKAGKHNPSGYILIEDVFCNDLRDPSAIDYSKPIFDWLRNSKDDALEKWECIISGDLQQK 179

Query: 929  QRALLGHATTPHLPQFKVVDMHKIRFCDLWFRVGAGYLYCHQGDCKHIIVIRDMRLIHPE 1108
            Q+ALLG  T  HLP FK VDMHK RFCDL FR+GAGYLYCHQGDC+H IVIRDMRL HPE
Sbjct: 180  QKALLGDPTISHLPHFKAVDMHKTRFCDLQFRLGAGYLYCHQGDCRHTIVIRDMRLFHPE 239

Query: 1109 DVQNRAAYPVLTFQHKNRFRKCSVCKVYRATKVTIDDKWAQENPCYFCDNCYYLLHYTED 1288
            DV +RAAYP+LTFQ K+R +KC VCK+YRATKVT+DDKWA ENPCYFCDNCY+LLHY+ED
Sbjct: 240  DVGDRAAYPILTFQLKSRVQKCCVCKIYRATKVTVDDKWAPENPCYFCDNCYFLLHYSED 299

Query: 1289 GSLLYHEFTVYDYHHE 1336
            GSLLY EF+VYDYHHE
Sbjct: 300  GSLLYKEFSVYDYHHE 315


>ref|XP_003529686.1| PREDICTED: snRNA-activating protein complex subunit 3-like [Glycine
            max]
          Length = 435

 Score =  441 bits (1134), Expect = e-121
 Identities = 221/436 (50%), Positives = 303/436 (69%), Gaps = 6/436 (1%)
 Frame = +2

Query: 47   VPRGGPIYHPDLVSPLTRTSEFETSVVIELQSLFSQLHTNNNRQDEDISVNELKILSEED 226
            +PRGGPIY P++V P TR   F+T ++ EL++L ++L  + +  D  ISV++LKI +E+D
Sbjct: 17   IPRGGPIYVPNMVGPSTRVPHFQTCLLSELRNLEAELSEDFSHLD--ISVDDLKIFTEDD 74

Query: 227  LVEIASKEIDSQIHTSLQTTTAEENNXXXXXXXXXXXXXXQFD----RDTRAAELENPSF 394
            L+++A KE+        Q    +EN+              +      + T  + LE+   
Sbjct: 75   LMDMALKEV-------FQGRENDENHPPLLDQPNASRFGEKKSNRKRKGTNDSVLESDC- 126

Query: 395  VGKIEEVANIKEKQDEDRVAVKLHSFSGGGGKGNEVSVPLVENIGKMMSLKFITSSTKIR 574
            + K+E+V  IK+KQ+ED+ +VKLHSF     + NE     V    +   ++ + S++  R
Sbjct: 127  IEKVEQVVRIKQKQEEDKASVKLHSFDR---RINEA----VHKSTRTERMRTLRSTSSTR 179

Query: 575  KLSNAS--EHIPIPYPEVILCVEVYKMSKIWVKTQEFLVLGSQMLSELRDQIYCLTDHLM 748
            K++ AS  EH+P+ YPEV+L VEVY   +   K QE LVLG Q L+ LRD+I+C TD +M
Sbjct: 180  KVNTASLQEHLPVLYPEVVLSVEVYHNVRKGTKIQELLVLGGQTLTALRDKIFCSTDQVM 239

Query: 749  QKAGEHDPSGYFLIEDVFCNDKRDPSAIDYSDPIFEWLKKSKDEACEKWECILSGELQQK 928
             KAG+HDPSGYFLIEDVFC D RDPSAID + PI +WL+ SK+EA +KWE I++GELQ+K
Sbjct: 240  HKAGQHDPSGYFLIEDVFCPDLRDPSAIDLTRPILDWLRDSKEEAQKKWEYIITGELQKK 299

Query: 929  QRALLGHATTPHLPQFKVVDMHKIRFCDLWFRVGAGYLYCHQGDCKHIIVIRDMRLIHPE 1108
            Q+A++G  +   LP F+ ++MHKIRFCDL F++GAGYLYCHQGDC H +VIRDMRLIHPE
Sbjct: 300  QKAIMGEKSASQLPHFRSIEMHKIRFCDLSFQLGAGYLYCHQGDCTHTLVIRDMRLIHPE 359

Query: 1109 DVQNRAAYPVLTFQHKNRFRKCSVCKVYRATKVTIDDKWAQENPCYFCDNCYYLLHYTED 1288
            DV NRA YP++TFQ K RF+KC+VCK++RATKVT+DDKW  ENPCYFCD C+ LLH  +D
Sbjct: 360  DVHNRAVYPIITFQLKLRFQKCNVCKIFRATKVTVDDKWTPENPCYFCDECFSLLHQADD 419

Query: 1289 GSLLYHEFTVYDYHHE 1336
            G+LLY +F  YDY+H+
Sbjct: 420  GTLLYTDFVEYDYNHD 435


>ref|XP_004145452.1| PREDICTED: uncharacterized protein LOC101221075 [Cucumis sativus]
          Length = 468

 Score =  434 bits (1115), Expect = e-119
 Identities = 223/449 (49%), Positives = 302/449 (67%), Gaps = 22/449 (4%)
 Frame = +2

Query: 47   VPRGGPIYHPDLVSPLTRTSEFETSVVIELQSLFSQLHTNNNRQ-DEDISVNELKILSEE 223
            +P GGPIY P+LV PLTR   FE+SVV ELQSL ++L  ++ +Q DEDIS++ELKI +EE
Sbjct: 22   IPLGGPIYAPNLVGPLTRVPHFESSVVQELQSLEAELQLDSCQQCDEDISIDELKIFTEE 81

Query: 224  DLVEIASK-EIDSQIHTSLQTTTAEEN----------------NXXXXXXXXXXXXXXQF 352
             L+ +A +  + S  + + Q+   EEN                N              + 
Sbjct: 82   QLLNMALEGSLQSHGNANNQSELQEENMNAGLLRECEEEVNGHNLEADSVSNANRSTNKI 141

Query: 353  DRDTRAAELEN--PSFVGKIEEVANIKEKQDEDRVAVKLHSFSGGGGKGNEVSVPLVENI 526
             R  +  EL N     + K+ E+  IK+KQ+ DR  V+LH+F        +++    E+ 
Sbjct: 142  TRKRKKEELSNIEEKSIAKVAEIVKIKQKQETDRAVVQLHAFKWK----KDIASSSSESK 197

Query: 527  GKMMSLKFITSSTKIRKLSNAS--EHIPIPYPEVILCVEVYKMSKIWVKTQEFLVLGSQM 700
             ++ SL+    S K+  + + S  +H  + +P  +L VEVY  S+  VK+QE L LG Q 
Sbjct: 198  ERLKSLRSTNFSAKVPHVKSLSGGKHESLHHPTTVLFVEVYHKSRKMVKSQELLALGRQT 257

Query: 701  LSELRDQIYCLTDHLMQKAGEHDPSGYFLIEDVFCNDKRDPSAIDYSDPIFEWLKKSKDE 880
            L+EL+D+IYC TD LMQKAG+ D SGYFL+EDVFCND R+PSA DYS PI +WL+ S+DE
Sbjct: 258  LAELKDKIYCSTDTLMQKAGQQDSSGYFLVEDVFCNDLRNPSATDYSKPILDWLRNSEDE 317

Query: 881  ACEKWECILSGELQQKQRALLGHATTPHLPQFKVVDMHKIRFCDLWFRVGAGYLYCHQGD 1060
            A +KW CI++GE QQK  +++G  +  H+P F+ V M+K RFCDL FR+GAGYLYCHQGD
Sbjct: 318  ARKKWGCIITGESQQKS-SVVGEVSDLHVPHFRSVSMNKARFCDLKFRLGAGYLYCHQGD 376

Query: 1061 CKHIIVIRDMRLIHPEDVQNRAAYPVLTFQHKNRFRKCSVCKVYRATKVTIDDKWAQENP 1240
            CKH IVIRDMRLIHPEDV +RAAYP++TFQ + R +KC VC +YRA KVTIDDKWAQENP
Sbjct: 377  CKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKVTIDDKWAQENP 436

Query: 1241 CYFCDNCYYLLHYTEDGSLLYHEFTVYDY 1327
            CYFC++CY+LLHY+++G+LLY++F V+DY
Sbjct: 437  CYFCEDCYFLLHYSKEGNLLYNDFVVHDY 465


>gb|AFK34824.1| unknown [Medicago truncatula]
          Length = 447

 Score =  422 bits (1084), Expect = e-115
 Identities = 219/440 (49%), Positives = 293/440 (66%), Gaps = 10/440 (2%)
 Frame = +2

Query: 47   VPRGGPIYHPDLVSPLTRTSEFETSVVIELQSLFSQLHTNNNRQDEDISVNELKILSEED 226
            +PRGGPIY  ++  P+ R   F+ S++ +L SL S+L  ++N    DISV++LK+ +E+D
Sbjct: 19   IPRGGPIYVSNMSGPIVRVPLFQDSILTQLHSLQSELPPDSNH---DISVDDLKVFTEDD 75

Query: 227  LVEIASKEIDSQIHTSLQTTTAEENNXXXXXXXXXXXXXXQFDRDTRAAE--LENPSFVG 400
            L+++A K++      +     AE N               QF R +R     + + +   
Sbjct: 76   LMDMALKQVFQGRDNNQDPPNAELN-----IEFGCRGQKKQFRRKSRLTNKPILDSNCKE 130

Query: 401  KIEEVANIKEKQDEDRVAVKLHSFSGGGGKGNEVSVPLVENIGKMMSLKFITSSTKIRKL 580
            K+EEV  IK+KQ+ED+  V+LHSF          +  +     +MMSL+  +S+ K+  L
Sbjct: 131  KVEEVVRIKQKQEEDKAQVRLHSFHPDCRINQSANKSIKTQ--RMMSLRSTSSARKVNTL 188

Query: 581  SNASEHIPIPYPEVILCVEVY-------KMSKIWVKTQEFLVLGSQMLSELRDQIYCLTD 739
                EHIP+   EV+L VE++       K+S    KTQE LVLG Q LS LRD+I C TD
Sbjct: 189  G-LQEHIPVQDSEVVLSVEIFHNFRKGVKLSNAKKKTQELLVLGGQNLSVLRDKINCSTD 247

Query: 740  HLMQKAGEHDPSGYFLIEDVFCNDKRDPSAIDYSDPIFEWLKKSKDEACEKWECILSGEL 919
             +MQKAG+HDPSGYFLIEDVF  D RDPSAID + PI +WL+ SK+EA +KWE I++GEL
Sbjct: 248  QVMQKAGQHDPSGYFLIEDVFYTDLRDPSAIDLTRPILDWLQNSKEEAQKKWEYIINGEL 307

Query: 920  QQKQRALLGHATTPHLPQFKVVDMHKIRFCDLWFRVGAGYLYCHQGDCKHIIVIRDMRLI 1099
            QQKQ+A++G A+  HLP+F   +MHKI FCDL FR+GAGYLYCHQGDC H +VIRDMRLI
Sbjct: 308  QQKQKAIVGEASVSHLPRFASFEMHKIHFCDLGFRLGAGYLYCHQGDCTHTLVIRDMRLI 367

Query: 1100 HPEDVQNRAAYPVLTFQHKNRFRKCSVCKVYRATKVTIDDKWAQENPCYFCDNCYYLLHY 1279
            H +DVQN A YP++TFQ K RF+KC VCK++RATKVT+DDKW  +NPCYFCD C+ LLH 
Sbjct: 368  HADDVQNWAVYPIVTFQLKIRFQKCGVCKIFRATKVTVDDKWTPDNPCYFCDECFSLLHL 427

Query: 1280 TED-GSLLYHEFTVYDYHHE 1336
             ED GS +Y +F  YDY+H+
Sbjct: 428  AEDGGSPMYTDFIEYDYNHD 447


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