BLASTX nr result
ID: Coptis21_contig00006630
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00006630
(1271 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276933.1| PREDICTED: trihelix transcription factor GT-... 297 3e-78
emb|CBI18200.3| unnamed protein product [Vitis vinifera] 287 5e-75
ref|XP_002266195.1| PREDICTED: trihelix transcription factor GT-... 279 1e-72
emb|CBI37606.3| unnamed protein product [Vitis vinifera] 260 6e-67
ref|XP_002331882.1| predicted protein [Populus trichocarpa] gi|2... 254 4e-65
>ref|XP_002276933.1| PREDICTED: trihelix transcription factor GT-2 [Vitis vinifera]
Length = 510
Score = 297 bits (761), Expect = 3e-78
Identities = 173/388 (44%), Positives = 235/388 (60%), Gaps = 28/388 (7%)
Frame = +3
Query: 9 RVDGKPYRFSNQLEAIDSRPSLPPLS---FEIQIPISTTVLNVTPTNSADSPQA-NAYPS 176
R +GK YRF QLEA+D+ P +PP S +E P++ ++ P + + Q NA P
Sbjct: 121 RQNGKNYRFFEQLEALDNHPLMPPPSPVKYETSTPMAASMPQTNPIDVTNVSQGINAVPC 180
Query: 177 CQNIYTSEFISTSLSPRSSL---REKSGYTKRKWSTFFENLIEEVVQKQEIFQNQFLKTX 347
+ ++ S S SS E S KRKW FFE L++EV++KQE Q +F++
Sbjct: 181 SIQKPAVDCVAASTSTTSSSGKESEGSRKKKRKWGVFFEKLMKEVIEKQENLQRKFIEAI 240
Query: 348 XXXXXXXXXXXXAWKTQEMERLNREHETLVEERLAATTRNAAVIAFLEKVSDQKD----- 512
AWK QE++R+ REHE LV+ER A ++AAV+AFL+K+++Q
Sbjct: 241 EKCEQDRIAREEAWKLQELDRIKREHEILVQERSIAAAKDAAVLAFLQKIAEQAGPVQLP 300
Query: 513 SSLSMERTVNNLHLDKGRNFIKMSCSRWPKAEVQALIALRSDLEHRYQGNIPKGSLWEEI 692
+ S E+ G N I+MS SRWPKAEV+ALI LR++ + +YQ + PKG LWEEI
Sbjct: 301 ENPSSEKVFEKQDNSNGENSIQMSSSRWPKAEVEALIRLRTNFDMQYQESGPKGPLWEEI 360
Query: 693 SVAMRRFGYNRSAKRCKEKWENINKYFRKVKESNKMRPEDSKTCPYFHQLEALYKDKMDK 872
S+AMR+ GY RSAKRCKEKWENINKYF++V++SNK RPEDSKTCPYFHQL+ALYK+K K
Sbjct: 361 SLAMRKIGYERSAKRCKEKWENINKYFKRVRDSNKRRPEDSKTCPYFHQLDALYKEKTKK 420
Query: 873 IDKALSPS-YGLKAEDLVMHM--TSQYRHQSESLRLEHMGLDLAA---EDLRSENDHENG 1034
++ + S Y LK ED++M M S+ R QSES+ E ++ A E+ E + E+G
Sbjct: 421 VENPDNNSGYNLKPEDILMQMMGQSEQRPQSESVTEEGGSENVNANQEEEEEEEEEEEDG 480
Query: 1035 DAE----------DVYENVINNPSSRTI 1088
D E D Y+ V NN SS I
Sbjct: 481 DEEGGDGDEDDEADGYQIVANNTSSMAI 508
Score = 83.2 bits (204), Expect = 1e-13
Identities = 42/99 (42%), Positives = 64/99 (64%)
Frame = +3
Query: 555 DKGRNFIKMSCSRWPKAEVQALIALRSDLEHRYQGNIPKGSLWEEISVAMRRFGYNRSAK 734
+ RNF + +RWP+ E AL+ +RSD++ ++ + K LWEE+S + GY+R+AK
Sbjct: 42 ESDRNF---AGNRWPREETLALLKIRSDMDVVFRDSSLKAPLWEEVSRKLGELGYHRNAK 98
Query: 735 RCKEKWENINKYFRKVKESNKMRPEDSKTCPYFHQLEAL 851
+CKEK+ENI KY ++ KE R ++ K +F QLEAL
Sbjct: 99 KCKEKFENIFKYHKRTKEGRSNR-QNGKNYRFFEQLEAL 136
>emb|CBI18200.3| unnamed protein product [Vitis vinifera]
Length = 540
Score = 287 bits (734), Expect = 5e-75
Identities = 168/386 (43%), Positives = 223/386 (57%), Gaps = 38/386 (9%)
Frame = +3
Query: 3 AARVDGKPYRFSNQLEAIDSRPSLP---------PLSFEIQIPIS---TTVLNVT----- 131
A++ DGK YRF +QLEA++++PSL P +P++ TT+ +T
Sbjct: 53 ASKADGKTYRFFDQLEALETQPSLASLPHSKPPAPAVLAATMPLANLPTTLPEITVPSTL 112
Query: 132 --PTNS----------ADSPQANAYPSCQNIYTSE------FISTSLSPRSSLRE---KS 248
PTNS + +P + +P N+ T+ F+S S S +S E +
Sbjct: 113 PNPTNSTANPTIPTIPSPTPPTSRHPPHNNVPTAHPAMAANFLSNSTSSSTSSDEELERR 172
Query: 249 GYTKRKWSTFFENLIEEVVQKQEIFQNQFLKTXXXXXXXXXXXXXAWKTQEMERLNREHE 428
G KRKW FF+ L+++V+++QE Q +FL+ AWK QEM R+NREHE
Sbjct: 173 GKRKRKWKAFFQRLMKDVIERQEELQKRFLEAIEKREHDRMVREEAWKMQEMARMNREHE 232
Query: 429 TLVEERLAATTRNAAVIAFLEKVSDQKDSSLSMERTVNNLHLDKGRNFIKMSCSRWPKAE 608
LV+ER A ++AAVIAFL+K+S+Q++ L + N N + S SRWPKAE
Sbjct: 233 LLVQERSIAAAKDAAVIAFLQKISEQQNPVLEPRKMDNG---GGAENLVPTSSSRWPKAE 289
Query: 609 VQALIALRSDLEHRYQGNIPKGSLWEEISVAMRRFGYNRSAKRCKEKWENINKYFRKVKE 788
VQALI LR+ L+ +YQ N PKG LWEEIS MR+ GYNR+AKRCKEKWENINKYF+KVKE
Sbjct: 290 VQALIRLRTSLDVKYQENGPKGPLWEEISAGMRKLGYNRNAKRCKEKWENINKYFKKVKE 349
Query: 789 SNKMRPEDSKTCPYFHQLEALYKDKMDKIDKALSPSYGLKAEDLVMHMTSQYRHQSESLR 968
SNK RPEDSKTCPYFHQLEALYK+K + +PSY L + M Q L
Sbjct: 350 SNKKRPEDSKTCPYFHQLEALYKEKNKMEINSFNPSYPLLKPENPMVPIMVQPEQQWPLH 409
Query: 969 LEHMGLDLAAEDLRSENDHENGDAED 1046
E + ED+ SEN+ E +D
Sbjct: 410 PEMNRSESGMEDMESENNMEQNQEDD 435
Score = 68.6 bits (166), Expect = 3e-09
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +3
Query: 669 KGSLWEEISVAMRRFGYNRSAKRCKEKWENINKYFRKVKESNKMRPEDSKTCPYFHQLEA 848
KG LWEE+S + GY+RSAK+CKEK+EN+ KY R+ KE + D KT +F QLEA
Sbjct: 11 KGPLWEEVSRKLAELGYHRSAKKCKEKFENVFKYHRRTKEGRASK-ADGKTYRFFDQLEA 69
Query: 849 L 851
L
Sbjct: 70 L 70
>ref|XP_002266195.1| PREDICTED: trihelix transcription factor GT-2-like [Vitis vinifera]
Length = 576
Score = 279 bits (713), Expect = 1e-72
Identities = 169/414 (40%), Positives = 227/414 (54%), Gaps = 66/414 (15%)
Frame = +3
Query: 3 AARVDGKPYRFSNQLEAIDSRPSLP---------PLSFEIQIPIS---TTVLNVT----- 131
A++ DGK YRF +QLEA++++PSL P +P++ TT+ +T
Sbjct: 128 ASKADGKTYRFFDQLEALETQPSLASLPHSKPPAPAVLAATMPLANLPTTLPEITVPSTL 187
Query: 132 --PTNS----------ADSPQANAYPSCQNIYTSE------FISTSLSPRSSLRE---KS 248
PTNS + +P + +P N+ T+ F+S S S +S E +
Sbjct: 188 PNPTNSTANPTIPTIPSPTPPTSRHPPHNNVPTAHPAMAANFLSNSTSSSTSSDEELERR 247
Query: 249 GYTKRKWSTFFENLIEEVVQKQEIFQNQFLKTXXXXXXXXXXXXXAWKTQEMERLNREHE 428
G KRKW FF+ L+++V+++QE Q +FL+ AWK QEM R+NREHE
Sbjct: 248 GKRKRKWKAFFQRLMKDVIERQEELQKRFLEAIEKREHDRMVREEAWKMQEMARMNREHE 307
Query: 429 TLVEERLAATTRNAAVIAFLEKVSDQKDS-------------------------SLSMER 533
LV+ER A ++AAVIAFL+K+S+Q++ L + +
Sbjct: 308 LLVQERSIAAAKDAAVIAFLQKISEQQNPVQLQDSTPPLPQPQAGPPQPPPPQPQLQLVK 367
Query: 534 TVNNLHLDKG---RNFIKMSCSRWPKAEVQALIALRSDLEHRYQGNIPKGSLWEEISVAM 704
+ +D G N + S SRWPKAEVQALI LR+ L+ +YQ N PKG LWEEIS M
Sbjct: 368 VLEPRKMDNGGGAENLVPTSSSRWPKAEVQALIRLRTSLDVKYQENGPKGPLWEEISAGM 427
Query: 705 RRFGYNRSAKRCKEKWENINKYFRKVKESNKMRPEDSKTCPYFHQLEALYKDKMDKIDKA 884
R+ GYNR+AKRCKEKWENINKYF+KVKESNK RPEDSKTCPYFHQLEALYK+K +
Sbjct: 428 RKLGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLEALYKEKNKMEINS 487
Query: 885 LSPSYGLKAEDLVMHMTSQYRHQSESLRLEHMGLDLAAEDLRSENDHENGDAED 1046
+PSY L + M Q L E + ED+ SEN+ E +D
Sbjct: 488 FNPSYPLLKPENPMVPIMVQPEQQWPLHPEMNRSESGMEDMESENNMEQNQEDD 541
Score = 89.0 bits (219), Expect = 2e-15
Identities = 42/88 (47%), Positives = 60/88 (68%)
Frame = +3
Query: 588 SRWPKAEVQALIALRSDLEHRYQGNIPKGSLWEEISVAMRRFGYNRSAKRCKEKWENINK 767
+RWP+ E AL+ +RSD++ ++ + KG LWEE+S + GY+RSAK+CKEK+EN+ K
Sbjct: 59 NRWPRQETLALLKIRSDMDVTFRDSSLKGPLWEEVSRKLAELGYHRSAKKCKEKFENVFK 118
Query: 768 YFRKVKESNKMRPEDSKTCPYFHQLEAL 851
Y R+ KE + D KT +F QLEAL
Sbjct: 119 YHRRTKEGRASK-ADGKTYRFFDQLEAL 145
>emb|CBI37606.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 260 bits (664), Expect = 6e-67
Identities = 149/332 (44%), Positives = 198/332 (59%), Gaps = 10/332 (3%)
Frame = +3
Query: 9 RVDGKPYRFSNQLEAIDSRPSLPPLS---FEIQIPISTTVLNVTPTNSADSPQA-NAYPS 176
R +GK YRF QLEA+D+ P +PP S +E P++ ++ P + + Q NA P
Sbjct: 137 RQNGKNYRFFEQLEALDNHPLMPPPSPVKYETSTPMAASMPQTNPIDVTNVSQGINAVPC 196
Query: 177 CQNIYTSEFISTSLSPRSSL---REKSGYTKRKWSTFFENLIEEVVQKQEIFQNQFLKTX 347
+ ++ S S SS E S KRKW FFE L++EV++KQE Q +F++
Sbjct: 197 SIQKPAVDCVAASTSTTSSSGKESEGSRKKKRKWGVFFEKLMKEVIEKQENLQRKFIEAI 256
Query: 348 XXXXXXXXXXXXAWKTQEMERLNREHETLVEERLAATTRNAAVIAFLEKVSDQKDSSLSM 527
AWK QE++R+ REHE LV+ER A ++AA
Sbjct: 257 EKCEQDRIAREEAWKLQELDRIKREHEILVQERSIAAAKDAA------------------ 298
Query: 528 ERTVNNLHLDKGRNFIKMSCSRWPKAEVQALIALRSDLEHRYQGNIPKGSLWEEISVAMR 707
N I+MS SRWPKAEV+ALI LR++ + +YQ + PKG LWEEIS+AMR
Sbjct: 299 -------------NSIQMSSSRWPKAEVEALIRLRTNFDMQYQESGPKGPLWEEISLAMR 345
Query: 708 RFGYNRSAKRCKEKWENINKYFRKVKESNKMRPEDSKTCPYFHQLEALYKDKMDKIDKAL 887
+ GY RSAKRCKEKWENINKYF++V++SNK RPEDSKTCPYFHQL+ALYK+K K++
Sbjct: 346 KIGYERSAKRCKEKWENINKYFKRVRDSNKRRPEDSKTCPYFHQLDALYKEKTKKVENPD 405
Query: 888 SPS-YGLKAEDLVMHM--TSQYRHQSESLRLE 974
+ S Y LK ED++M M S+ R QSES+ E
Sbjct: 406 NNSGYNLKPEDILMQMMGQSEQRPQSESVTEE 437
Score = 83.2 bits (204), Expect = 1e-13
Identities = 42/99 (42%), Positives = 64/99 (64%)
Frame = +3
Query: 555 DKGRNFIKMSCSRWPKAEVQALIALRSDLEHRYQGNIPKGSLWEEISVAMRRFGYNRSAK 734
+ RNF + +RWP+ E AL+ +RSD++ ++ + K LWEE+S + GY+R+AK
Sbjct: 58 ESDRNF---AGNRWPREETLALLKIRSDMDVVFRDSSLKAPLWEEVSRKLGELGYHRNAK 114
Query: 735 RCKEKWENINKYFRKVKESNKMRPEDSKTCPYFHQLEAL 851
+CKEK+ENI KY ++ KE R ++ K +F QLEAL
Sbjct: 115 KCKEKFENIFKYHKRTKEGRSNR-QNGKNYRFFEQLEAL 152
>ref|XP_002331882.1| predicted protein [Populus trichocarpa] gi|222874631|gb|EEF11762.1|
predicted protein [Populus trichocarpa]
Length = 470
Score = 254 bits (648), Expect = 4e-65
Identities = 160/407 (39%), Positives = 220/407 (54%), Gaps = 43/407 (10%)
Frame = +3
Query: 3 AARVDGKPYRFSNQLEAIDSRPSL-PPLSFEIQ---------IPISTTVLNVTPTNSADS 152
+ R +GK YRF QL+A+D +L P S + IP+S + N P S S
Sbjct: 84 SGRPNGKTYRFFEQLQALDKTNALVSPTSSDKDHCLMPSASVIPVSF-IPNDVPC-SVQS 141
Query: 153 PQANAYPSCQNIYTSEFISTSLSPRSSLREKSGYTKRKWSTFFENLIEEVVQKQEIFQNQ 332
P+ N C + ++ STS R+K KR+ + FFE L++EV++KQE QN+
Sbjct: 142 PRMN----CTDATSTSTASTSSEESEGTRKK----KRRLTDFFERLMKEVIEKQENLQNK 193
Query: 333 FLKTXXXXXXXXXXXXXAWKTQEMERLNREHETLVEERLAATTRNAAVIAFLEKVSDQ-- 506
FL+ WK QE++R+ RE E LV ER A ++AAV+AFL+K S+Q
Sbjct: 194 FLEAIEKCEQERIAREEVWKMQELDRIKREQELLVHERAIAAAKDAAVLAFLQKFSEQGI 253
Query: 507 -------------------------KDSSLSMERTVNNLHLDKGRNFIKMSCSRWPKAEV 611
K+ ++ +E V +F+ MS SRWPK E+
Sbjct: 254 PVQLPDNPTVPMKFPDNQTSPALLSKNQAVPVENVVKTHENSSVESFVNMSSSRWPKEEI 313
Query: 612 QALIALRSDLEHRYQGNIPKGSLWEEISVAMRRFGYNRSAKRCKEKWENINKYFRKVKES 791
++LI +R+ LE +YQ N PKG LWEEIS +M+ GY+RSAKRCKEKWEN+NKYF++VK+S
Sbjct: 314 ESLIKIRTYLEFQYQENGPKGPLWEEISTSMKNLGYDRSAKRCKEKWENMNKYFKRVKDS 373
Query: 792 NKMRPEDSKTCPYFHQLEALYKDKMDKIDKALSPSYGLKAEDLVMHMTSQYRHQSESLRL 971
NK RP DSKTCPYF QL+ALY++K ++D +PSY LK E+L+MHM Q
Sbjct: 374 NKKRPGDSKTCPYFQQLDALYREKTRRVD---NPSYELKPEELLMHMMGGQEDQ------ 424
Query: 972 EHMGLDLAAEDLRSEN------DHENGDAEDVYENVINNPSSRTIAE 1094
+ ED SEN D+ + D Y V +PSS I E
Sbjct: 425 -QLPDSATTEDRESENVDQIQVDYRGKEDGDGYGIVAIDPSSLEIME 470
Score = 95.9 bits (237), Expect = 2e-17
Identities = 48/105 (45%), Positives = 69/105 (65%)
Frame = +3
Query: 582 SCSRWPKAEVQALIALRSDLEHRYQGNIPKGSLWEEISVAMRRFGYNRSAKRCKEKWENI 761
+ +RWPK E AL+ +RSD++ ++ ++ K LWEE+S + GYNRSAK+CKEK+ENI
Sbjct: 13 TANRWPKQETLALLEIRSDMDVAFRDSVVKAPLWEEVSRKLNELGYNRSAKKCKEKFENI 72
Query: 762 NKYFRKVKESNKMRPEDSKTCPYFHQLEALYKDKMDKIDKALSPS 896
KY R+ K S RP + KT +F QL+AL DK + +SP+
Sbjct: 73 YKYHRRTKGSQSGRP-NGKTYRFFEQLQAL-----DKTNALVSPT 111