BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006626
         (1406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...   338   2e-90
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]   335   2e-89
ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containi...   327   6e-87
ref|XP_002322749.1| predicted protein [Populus trichocarpa] gi|2...   315   2e-83
ref|XP_002517926.1| pentatricopeptide repeat-containing protein,...   313   7e-83

>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
            mitochondrial [Vitis vinifera]
          Length = 499

 Score =  338 bits (868), Expect = 2e-90
 Identities = 170/349 (48%), Positives = 236/349 (67%)
 Frame = +1

Query: 1    HGIEQAETYFNTISEQIRKTFPVYNALLKCCVYAKSIEKAEDFIQQMKQFGLAPSAHSYN 180
            HG+EQAE YFN     +R +F VY ALL C    KS+EKAE  +Q+M+  G   +  SYN
Sbjct: 117  HGLEQAEKYFNETPNSLR-SFQVYGALLNCYSQKKSLEKAEAIMQEMRDMGFVKTL-SYN 174

Query: 181  VLLSFYSKVGQYEKLDTLMEEMKENGVRPDKFTLSIRMSAYVANSDIEGLEKVFQSMEVD 360
            V+L  YS++G++EKLD LM+EM+ENG+  D FT  IR++AY A SD+EG+EK+   +E D
Sbjct: 175  VMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMKLETD 234

Query: 361  PNIIVDWNCYVIAANGYIKVGFIDKALEILKKSEKLITRKQQRVAYVSLLTGYAHARSKE 540
            P +  DWN Y++AANGY+K    +KA+E+LKKSE+ I+ + +R  Y  LLT YA   +K 
Sbjct: 235  PAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQFISGRSRRFGYEILLTLYATMGNKT 294

Query: 541  DLYRIWKMYKSSVKLNNKAYICMIGSLLKLGDIAGAENILEEWQSGNNSFDFRVPNLLVV 720
            ++YRIW +YK+  K  N  Y+ M+ SLLKL D+ GAE   EEW SGN  FDFRVPNLL+ 
Sbjct: 295  EVYRIWNLYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSGNKFFDFRVPNLLIR 354

Query: 721  AYCKSGLVEKAQKLMNVTIEKGKKPFLSSWNHLATGYVQANQLPKALKAMESAFPAIQGR 900
            AYCK GL+EKA++L++  IE+G++P   +W+ LA GY + NQ+ KA+  ++ A  A    
Sbjct: 355  AYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQG 414

Query: 901  RMPDRDTLSACLEYLKQQGDVMKTEEFVRLLGAPDHMSTDDIETLLDYM 1047
              P+  TLSACLEYLK +GDV + E  +RLL     +S  D + L++Y+
Sbjct: 415  WKPNPVTLSACLEYLKGKGDVEEAENLIRLLREQSLVSAYDSDRLVNYI 463


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score =  335 bits (859), Expect = 2e-89
 Identities = 169/349 (48%), Positives = 234/349 (67%)
 Frame = +1

Query: 1    HGIEQAETYFNTISEQIRKTFPVYNALLKCCVYAKSIEKAEDFIQQMKQFGLAPSAHSYN 180
            HG+EQAE YFN     +R +F VY ALL C    KS+EKAE  +Q+M+  G   +  SYN
Sbjct: 117  HGLEQAEKYFNETPNSLR-SFQVYGALLNCYSQKKSLEKAEAIMQEMRDMGFVKTL-SYN 174

Query: 181  VLLSFYSKVGQYEKLDTLMEEMKENGVRPDKFTLSIRMSAYVANSDIEGLEKVFQSMEVD 360
            V+L  YS++G++EKLD LM+EM+ENG+  D FT  IR++AY A SD+EG+EK+   +E D
Sbjct: 175  VMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMKLETD 234

Query: 361  PNIIVDWNCYVIAANGYIKVGFIDKALEILKKSEKLITRKQQRVAYVSLLTGYAHARSKE 540
            P +  DWN Y++AANGY+K    +KA+E+LKKSE+ I+ + +R  Y  LLT YA   +K 
Sbjct: 235  PAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQFISGRSRRFGYEILLTLYATMGNKT 294

Query: 541  DLYRIWKMYKSSVKLNNKAYICMIGSLLKLGDIAGAENILEEWQSGNNSFDFRVPNLLVV 720
            + YRIW +YK+  K  N  Y+ M+ SLLKL D+ GAE   EEW SGN  FDFRVPNLL+ 
Sbjct: 295  EXYRIWNLYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSGNKFFDFRVPNLLIR 354

Query: 721  AYCKSGLVEKAQKLMNVTIEKGKKPFLSSWNHLATGYVQANQLPKALKAMESAFPAIQGR 900
            AYCK GL+EKA++L++  IE+G++P   +W+ LA GY + NQ+ KA+  ++ A  A    
Sbjct: 355  AYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQG 414

Query: 901  RMPDRDTLSACLEYLKQQGDVMKTEEFVRLLGAPDHMSTDDIETLLDYM 1047
              P+  TLSACLEYLK + DV + E  +RLL     +S  D + L++Y+
Sbjct: 415  WKPNPVTLSACLEYLKGKXDVEEAENLIRLLREQSLVSAYDSDRLVNYI 463


>ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
            mitochondrial-like [Vitis vinifera]
          Length = 494

 Score =  327 bits (837), Expect = 6e-87
 Identities = 165/369 (44%), Positives = 233/369 (63%)
 Frame = +1

Query: 1    HGIEQAETYFNTISEQIRKTFPVYNALLKCCVYAKSIEKAEDFIQQMKQFGLAPSAHSYN 180
            HG+EQ E YFN I + + KT+ VY ALL C    KS++KAE  +Q+++  G   +A  YN
Sbjct: 130  HGLEQVENYFNNIHKNL-KTYQVYIALLNCYALEKSVDKAEAIMQRLRDLGFVRTALGYN 188

Query: 181  VLLSFYSKVGQYEKLDTLMEEMKENGVRPDKFTLSIRMSAYVANSDIEGLEKVFQSMEVD 360
             L++ Y ++G +EKLD LM EM+E G+  DKFTL+IR+SAY A S+I G++ +   ME D
Sbjct: 189  TLMNVYYRMGNWEKLDILMHEMEEKGIFCDKFTLAIRLSAYAAASNIVGIDNIVTRMESD 248

Query: 361  PNIIVDWNCYVIAANGYIKVGFIDKALEILKKSEKLITRKQQRVAYVSLLTGYAHARSKE 540
            P II+DWN Y + A+GY+KVG +DK L ++KK E+LI  K   VA+ +LL  YA  R ++
Sbjct: 249  PRIILDWNSYAVVAHGYLKVGLVDKTLVMMKKLEELIDAKGSNVAFDNLLKLYAETRQRD 308

Query: 541  DLYRIWKMYKSSVKLNNKAYICMIGSLLKLGDIAGAENILEEWQSGNNSFDFRVPNLLVV 720
            +L R+W +YK   K+ NK Y+ MI SLLK  DI  AE +LEEW+S   S+DFRVPN L+ 
Sbjct: 309  ELDRVWMLYKKKEKIYNKGYMAMISSLLKFDDIDAAEKVLEEWESRRLSYDFRVPNFLID 368

Query: 721  AYCKSGLVEKAQKLMNVTIEKGKKPFLSSWNHLATGYVQANQLPKALKAMESAFPAIQGR 900
            AYC+ GL EKA+ L+N  + KG  P + +W +LA GY++ +Q+PKA++A++ A       
Sbjct: 369  AYCRKGLTEKAEALVNKILTKGGNPLVDTWFYLANGYLEDSQIPKAVEALKKAVVVCPPN 428

Query: 901  RMPDRDTLSACLEYLKQQGDVMKTEEFVRLLGAPDHMSTDDIETLLDYMYTSNSQAEVNV 1080
              P ++TL+ CLEYL+   DV    EF+R L      S    + LL Y+     Q     
Sbjct: 429  WKPSKNTLATCLEYLEGNRDVEGAGEFIRFLQNEGIFSVGVCKRLLSYIENGKPQP---- 484

Query: 1081 GNAVDESEG 1107
             N + E EG
Sbjct: 485  -NRLGEIEG 492


>ref|XP_002322749.1| predicted protein [Populus trichocarpa] gi|222867379|gb|EEF04510.1|
            predicted protein [Populus trichocarpa]
          Length = 505

 Score =  315 bits (807), Expect = 2e-83
 Identities = 167/360 (46%), Positives = 236/360 (65%), Gaps = 2/360 (0%)
 Frame = +1

Query: 1    HGIEQAETYFNTISEQIRKTFPVYNALLKCCVYAKSIEKAEDFIQQMKQFGLAPSAHSYN 180
            HGIEQA+  FN   + + K   VY+ALL C   AK +EKAE  +Q+MK  G A +   YN
Sbjct: 141  HGIEQAQKLFNNTPQHL-KVLKVYSALLNCYAKAKLVEKAESVVQEMKSLGFANTLLVYN 199

Query: 181  VLLSFYSKVGQYEKLDTLMEEMKENGVRPDKFTLSIRMSAYVANSDIEGLEKVFQSMEVD 360
            V+L+FY + G  +K+++LM+EM++NG+  DKF  SI++SAY + SDI G+EK    ME D
Sbjct: 200  VILNFYYQTGNPDKINSLMQEMEQNGIGCDKFAHSIQLSAYASVSDIVGIEKTLAKMESD 259

Query: 361  PNIIVDWNCYVIAANGYIKVGFIDKALEILKKSEKLITRKQQRVAYVSLLTGYAHARSKE 540
            PN+ +DW  Y  AA GYIKVG +DKALE+L+KSE+L+T K++  AY SL+T YA      
Sbjct: 260  PNVFLDWTSYTAAAKGYIKVGLVDKALEMLEKSERLVTGKRRGTAYDSLITLYAATGKTN 319

Query: 541  DLYRIWKMYKSSVKLNNKAYICMIGSLLKLGDIAGAENILEEWQSGNNS-FDFRVPNLLV 717
            ++ RIW++YK + K+  +AYI +I SLLKL D   AE I EEW+  N+S +D  +PN L+
Sbjct: 320  EVLRIWELYKKNEKVYKEAYISIITSLLKLDDFENAEKIFEEWEFQNHSCYDIHIPNFLI 379

Query: 718  VAYCKSGLVEKAQKLMNVTIEKGKKPFLSSWNHLATGYVQANQLPKALKAMESAFPAIQG 897
             AY + GLVEKA+ L++  I KG +P   +W HLATGY+Q  Q  KA++AM+ A   + G
Sbjct: 380  DAYSRKGLVEKAETLIDRAISKGGEPNAKTWYHLATGYLQNGQTLKAVEAMKKAV-VVSG 438

Query: 898  RR-MPDRDTLSACLEYLKQQGDVMKTEEFVRLLGAPDHMSTDDIETLLDYMYTSNSQAEV 1074
            R   P  + L+ CL YLK +GD+ K   F+ LL   D +S D  E LL+++  + S ++V
Sbjct: 439  RMWKPSNEILANCLGYLKVEGDLGKLTNFMDLLRDNDIISLDIQERLLNHIKNAKSSSDV 498


>ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223542908|gb|EEF44444.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  313 bits (802), Expect = 7e-83
 Identities = 160/330 (48%), Positives = 217/330 (65%)
 Frame = +1

Query: 1    HGIEQAETYFNTISEQIRKTFPVYNALLKCCVYAKSIEKAEDFIQQMKQFGLAPSAHSYN 180
            HG+ +AE YFN+I +  R    VY ALL CC ++K + KAE  +Q+MK  G   ++ SYN
Sbjct: 121  HGLVKAEEYFNSIPDTSRDR-QVYGALLNCCAHSKLLGKAEATMQKMKDLGFVKNSLSYN 179

Query: 181  VLLSFYSKVGQYEKLDTLMEEMKENGVRPDKFTLSIRMSAYVANSDIEGLEKVFQSMEVD 360
            V+LS YS +G YEKLD L++EM+ENG+  D+ T  IR++A V +SDIEG+EK+   MEVD
Sbjct: 180  VMLSLYSHMGNYEKLDPLVQEMEENGISCDRITYCIRLNACVNSSDIEGMEKLLMKMEVD 239

Query: 361  PNIIVDWNCYVIAANGYIKVGFIDKALEILKKSEKLITRKQQRVAYVSLLTGYAHARSKE 540
            PNI V ++ YVIAANGY+K G +DK L +LK+SE+LI+   +R AY  LLT Y  + +K 
Sbjct: 240  PNISVGFHAYVIAANGYLKAGLVDKTLIMLKRSEQLISGNTRRFAYEFLLTLYTASGNKA 299

Query: 541  DLYRIWKMYKSSVKLNNKAYICMIGSLLKLGDIAGAENILEEWQSGNNSFDFRVPNLLVV 720
            ++YRIW  YK   +  N  YICMI SLLKL DI GAE I EEW S    FD R+PN +V 
Sbjct: 300  EVYRIWNKYKEIGRFFNSGYICMISSLLKLDDIDGAERIFEEWDSKKVLFDIRIPNSMVN 359

Query: 721  AYCKSGLVEKAQKLMNVTIEKGKKPFLSSWNHLATGYVQANQLPKALKAMESAFPAIQGR 900
             Y + G +EKA+  +N  +  G++P  +SWNHLA GY  + Q+ KA++ +  A    +  
Sbjct: 360  VYSRKGHLEKAETYINKIVASGEEPDATSWNHLAAGYHSSGQMTKAVETIRKAISVSKPG 419

Query: 901  RMPDRDTLSACLEYLKQQGDVMKTEEFVRL 990
              P   TLSACLE+LK QGD    EE +++
Sbjct: 420  WKPSLLTLSACLEFLKGQGDAETLEELLKI 449