BLASTX nr result

ID: Coptis21_contig00006614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006614
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34929.1| unknown [Lotus japonicus] gi|388511333|gb|AFK4372...   126   2e-27
ref|XP_002866930.1| hypothetical protein ARALYDRAFT_912546 [Arab...   118   6e-25
ref|NP_001236940.1| uncharacterized protein LOC100527245 [Glycin...   115   4e-24
ref|NP_001236314.1| uncharacterized protein LOC100499808 [Glycin...   115   4e-24
ref|NP_195496.1| cytochrome c oxidase subunit VIa [Arabidopsis t...   115   4e-24

>gb|AFK34929.1| unknown [Lotus japonicus] gi|388511333|gb|AFK43728.1| unknown
           [Lotus japonicus]
          Length = 102

 Score =  126 bits (317), Expect = 2e-27
 Identities = 54/61 (88%), Positives = 56/61 (91%)
 Frame = -1

Query: 384 TAKWEKITYLGIASCTALAVYCLSKPHPHHEDPPAYPYLHIRNKEFPWGPDGLFEVKHTD 205
           TAKWEKITYLGIASCTALA YCLSK HPH+E+PPAYPYLHIRNKEFPWGPDGLFE KH  
Sbjct: 42  TAKWEKITYLGIASCTALAAYCLSKGHPHYEEPPAYPYLHIRNKEFPWGPDGLFETKHEH 101

Query: 204 H 202
           H
Sbjct: 102 H 102


>ref|XP_002866930.1| hypothetical protein ARALYDRAFT_912546 [Arabidopsis lyrata subsp.
           lyrata] gi|297312766|gb|EFH43189.1| hypothetical protein
           ARALYDRAFT_912546 [Arabidopsis lyrata subsp. lyrata]
          Length = 102

 Score =  118 bits (295), Expect = 6e-25
 Identities = 52/59 (88%), Positives = 54/59 (91%)
 Frame = -1

Query: 381 AKWEKITYLGIASCTALAVYCLSKPHPHHEDPPAYPYLHIRNKEFPWGPDGLFEVKHTD 205
           AKWEKITYLGIASCTALAVY LSK H H EDPPAYPY+HIRNKEFPWGPDGLFEVKH +
Sbjct: 42  AKWEKITYLGIASCTALAVYVLSKGHHHGEDPPAYPYMHIRNKEFPWGPDGLFEVKHNE 100


>ref|NP_001236940.1| uncharacterized protein LOC100527245 [Glycine max]
           gi|255631866|gb|ACU16300.1| unknown [Glycine max]
          Length = 102

 Score =  115 bits (288), Expect = 4e-24
 Identities = 50/58 (86%), Positives = 52/58 (89%)
 Frame = -1

Query: 384 TAKWEKITYLGIASCTALAVYCLSKPHPHHEDPPAYPYLHIRNKEFPWGPDGLFEVKH 211
           TAKWEKITYLGI SCT LAVY LSK HPH ++PPAYPYLHIRNKEFPWGPDGLFE KH
Sbjct: 41  TAKWEKITYLGIVSCTGLAVYNLSKGHPHFKEPPAYPYLHIRNKEFPWGPDGLFETKH 98


>ref|NP_001236314.1| uncharacterized protein LOC100499808 [Glycine max]
           gi|255626789|gb|ACU13739.1| unknown [Glycine max]
          Length = 102

 Score =  115 bits (288), Expect = 4e-24
 Identities = 50/60 (83%), Positives = 52/60 (86%)
 Frame = -1

Query: 384 TAKWEKITYLGIASCTALAVYCLSKPHPHHEDPPAYPYLHIRNKEFPWGPDGLFEVKHTD 205
           TAKWEKITYLGI  CT LAVY LSK HPH ++PPAYPYLHIRNKEFPWGPDGLFE KH D
Sbjct: 41  TAKWEKITYLGIVGCTGLAVYNLSKGHPHFKEPPAYPYLHIRNKEFPWGPDGLFETKHHD 100


>ref|NP_195496.1| cytochrome c oxidase subunit VIa [Arabidopsis thaliana]
           gi|75213718|sp|Q9T070.1|COX6A_ARATH RecName:
           Full=Cytochrome c oxidase subunit 6a, mitochondrial;
           Short=AtCOX6a; Flags: Precursor
           gi|11908090|gb|AAG41474.1|AF326892_1 unknown protein
           [Arabidopsis thaliana]
           gi|12642898|gb|AAK00391.1|AF339709_1 unknown protein
           [Arabidopsis thaliana]
           gi|14190491|gb|AAK55726.1|AF380645_1
           AT4g37830/T28I19_110 [Arabidopsis thaliana]
           gi|4490728|emb|CAB38931.1| putative protein [Arabidopsis
           thaliana] gi|7270766|emb|CAB80448.1| putative protein
           [Arabidopsis thaliana] gi|15810105|gb|AAL06978.1|
           AT4g37830/T28I19_110 [Arabidopsis thaliana]
           gi|110737597|dbj|BAF00740.1| hypothetical protein
           [Arabidopsis thaliana] gi|332661442|gb|AEE86842.1|
           cytochrome c oxidase subunit VIa [Arabidopsis thaliana]
          Length = 102

 Score =  115 bits (288), Expect = 4e-24
 Identities = 51/57 (89%), Positives = 53/57 (92%)
 Frame = -1

Query: 381 AKWEKITYLGIASCTALAVYCLSKPHPHHEDPPAYPYLHIRNKEFPWGPDGLFEVKH 211
           AKWEKITYLGIASCTALAVY LSK H H EDPPAYP++HIRNKEFPWGPDGLFEVKH
Sbjct: 42  AKWEKITYLGIASCTALAVYVLSKGHHHGEDPPAYPHMHIRNKEFPWGPDGLFEVKH 98


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