BLASTX nr result

ID: Coptis21_contig00006611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006611
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF42035.1| alpha-Arabinosidase1 [Pyrus communis]                  81   1e-13
gb|AAP97437.1| alpha-L-arabinofuranosidase [Malus x domestica]         80   1e-13
dbj|BAC99303.1| alpha-L-arabinofuranosidase [Pyrus pyrifolia]          80   2e-13
ref|XP_002322584.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
gb|ADP88923.1| alpha-N-arabinofuranosidase [Gunnera manicata]          79   5e-13

>dbj|BAF42035.1| alpha-Arabinosidase1 [Pyrus communis]
          Length = 675

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/76 (56%), Positives = 53/76 (69%)
 Frame = -1

Query: 407 NLIGLSGVTKTVLTSSNLKDENSFKEPNKVVPIQTPLENAGNELDFTLSPHSFTSFNLLM 228
           N I LSG TKTVLTS+N  DENSF +P KV+P Q+ LE+AG E++  +SP SFTS +LLM
Sbjct: 597 NSISLSGSTKTVLTSNNQMDENSFNDPTKVIPKQSLLESAGEEMEVVISPRSFTSIDLLM 656

Query: 227 EAGKQEGIDEADIVSV 180
           E+        AD VSV
Sbjct: 657 ESSDIIRTTGADSVSV 672


>gb|AAP97437.1| alpha-L-arabinofuranosidase [Malus x domestica]
          Length = 675

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/76 (55%), Positives = 53/76 (69%)
 Frame = -1

Query: 407 NLIGLSGVTKTVLTSSNLKDENSFKEPNKVVPIQTPLENAGNELDFTLSPHSFTSFNLLM 228
           N + LSG TKTVLTS+N  DENSF EP KV+P ++ LE+AG E++  +SP SFTS +LLM
Sbjct: 597 NSVSLSGSTKTVLTSNNQMDENSFNEPKKVIPKRSLLESAGEEMEVVISPRSFTSIDLLM 656

Query: 227 EAGKQEGIDEADIVSV 180
           E+        AD VSV
Sbjct: 657 ESSDVIRTTGADSVSV 672


>dbj|BAC99303.1| alpha-L-arabinofuranosidase [Pyrus pyrifolia]
          Length = 674

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 43/76 (56%), Positives = 52/76 (68%)
 Frame = -1

Query: 407 NLIGLSGVTKTVLTSSNLKDENSFKEPNKVVPIQTPLENAGNELDFTLSPHSFTSFNLLM 228
           N I LSG TKTVLTS+N  DENSF EP KV+P Q+ LE+A  E++  +SP SFTS +LLM
Sbjct: 596 NSISLSGSTKTVLTSNNQMDENSFNEPTKVIPKQSLLESASEEMEVVISPRSFTSIDLLM 655

Query: 227 EAGKQEGIDEADIVSV 180
           E+        AD VSV
Sbjct: 656 ESSDIIRTTGADSVSV 671


>ref|XP_002322584.1| predicted protein [Populus trichocarpa] gi|222867214|gb|EEF04345.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/58 (68%), Positives = 45/58 (77%)
 Frame = -1

Query: 395 LSGVTKTVLTSSNLKDENSFKEPNKVVPIQTPLENAGNELDFTLSPHSFTSFNLLMEA 222
           LSG TKTVLTSSNL DENSF  P KVVP QT LENA  ++D  LSP+S TSF+LL E+
Sbjct: 594 LSGSTKTVLTSSNLMDENSFANPKKVVPAQTMLENADKDMDVVLSPYSLTSFDLLTES 651


>gb|ADP88923.1| alpha-N-arabinofuranosidase [Gunnera manicata]
          Length = 698

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/56 (69%), Positives = 44/56 (78%)
 Frame = -1

Query: 392 SGVTKTVLTSSNLKDENSFKEPNKVVPIQTPLENAGNELDFTLSPHSFTSFNLLME 225
           +G +KTVLTSSN+ DENSF EP KVVPIQ+ L   G  LDF LSPHSFTSF+LL E
Sbjct: 625 TGSSKTVLTSSNVMDENSFNEPKKVVPIQSGLGITGENLDFVLSPHSFTSFDLLRE 680


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