BLASTX nr result
ID: Coptis21_contig00006593
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00006593
(797 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein... 109 8e-22
emb|CBI23316.3| unnamed protein product [Vitis vinifera] 103 3e-20
emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera] 92 1e-16
ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein... 82 1e-13
ref|XP_004143230.1| PREDICTED: putative F-box/LRR-repeat protein... 80 4e-13
>ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like [Vitis
vinifera]
Length = 665
Score = 109 bits (272), Expect = 8e-22
Identities = 78/204 (38%), Positives = 104/204 (50%), Gaps = 9/204 (4%)
Frame = -2
Query: 766 QTIDDSFQNLLRRTFESVCHAIVLSLSTRCLQVLSLLEQKMNVGSCSNCNRLELNTCLTK 587
Q + + N+LR + + H L++ T CL+VLS+LE K S L LNT K
Sbjct: 465 QYFSEDYSNMLREILKQLSHVENLTVGTWCLEVLSVLEMKSMPSPLSKHRYLILNTLPKK 524
Query: 586 WELPGIKLLLRSSPTLQTLTIQKGDKCGRFCFDDGVFPKY----DFDEVNYWNS-IMSFP 422
W+LPGI LL+SSP L+ L I ++ VF Y D ++W S SF
Sbjct: 525 WDLPGIASLLKSSPDLEKLHIDVNPLNVLKFWEHQVFNNYYKYGDDHGESFWESEEKSFK 584
Query: 421 CLRTTLKTVQIFDFTGGSSE----TAFVEFLLNKSAVLQKMVIHSKKAQDVYGYPPFTSD 254
CL LK ++I F G + AF+EFLL + VL+KMVI+ +K + Y +
Sbjct: 585 CLLQNLKIIKIVGFDPGYCDIQFAIAFIEFLLKNAQVLEKMVINVRKVKRQTSY----AA 640
Query: 253 DMFKFSQKLLSFQRASPSAIVLFS 182
QKLLSF RASP A VLFS
Sbjct: 641 QELPVVQKLLSFTRASPRAAVLFS 664
Score = 62.4 bits (150), Expect = 1e-07
Identities = 34/81 (41%), Positives = 46/81 (56%)
Frame = -2
Query: 766 QTIDDSFQNLLRRTFESVCHAIVLSLSTRCLQVLSLLEQKMNVGSCSNCNRLELNTCLTK 587
Q + + N+LR + + H L++ T CL+VLS+LE K S L LNT K
Sbjct: 312 QYFSEDYSNMLREILKHLSHVENLTVGTWCLEVLSVLEMKSMPSPLSKHRYLILNTLPKK 371
Query: 586 WELPGIKLLLRSSPTLQTLTI 524
W+LPGI LL+SSP L+ L I
Sbjct: 372 WDLPGIASLLKSSPDLEKLHI 392
>emb|CBI23316.3| unnamed protein product [Vitis vinifera]
Length = 192
Score = 103 bits (258), Expect = 3e-20
Identities = 76/195 (38%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Frame = -2
Query: 739 LLRRTFESVCHAIVLSLSTRCLQVLSLLEQKMNVGSCSNCNRLELNTCLTKWELPGIKLL 560
+LR + + H L++ T CL+VLS+LE K S L LNT KW+LPGI L
Sbjct: 1 MLREILKQLSHVENLTVGTWCLEVLSVLEMKSMPSPLSKHRYLILNTLPKKWDLPGIASL 60
Query: 559 LRSSPTLQTLTIQKGDKCGRFCFDDGVFPKY----DFDEVNYWNS-IMSFPCLRTTLKTV 395
L+SSP L+ L I ++ VF Y D ++W S SF CL LK +
Sbjct: 61 LKSSPDLEKLHIDVNPLNVLKFWEHQVFNNYYKYGDDHGESFWESEEKSFKCLLQNLKII 120
Query: 394 QIFDFTGGSSE----TAFVEFLLNKSAVLQKMVIHSKKAQDVYGYPPFTSDDMFKFSQKL 227
+I F G + AF+EFLL + VL+KMVI+ +K + Y + QKL
Sbjct: 121 KIVGFDPGYCDIQFAIAFIEFLLKNAQVLEKMVINVRKVKRQTSY----AAQELPVVQKL 176
Query: 226 LSFQRASPSAIVLFS 182
LSF RASP A VLFS
Sbjct: 177 LSFTRASPRAAVLFS 191
>emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]
Length = 526
Score = 92.0 bits (227), Expect = 1e-16
Identities = 63/174 (36%), Positives = 88/174 (50%), Gaps = 9/174 (5%)
Frame = -2
Query: 766 QTIDDSFQNLLRRTFESVCHAIVLSLSTRCLQVLSLLEQKMNVGSCSNCNRLELNTCLTK 587
Q + + N+LR + + H L++ T CL+VLS+LE K S L LNT K
Sbjct: 312 QYFSEDYSNMLREILKQLSHVENLTVGTWCLEVLSVLEMKSMPSPLSKHRYLILNTLPKK 371
Query: 586 WELPGIKLLLRSSPTLQTLTIQKGDKCGRFCFDDGVFPKY----DFDEVNYWNS-IMSFP 422
W+LPGI LL+SSP L+ L I ++ VF Y D ++W S SF
Sbjct: 372 WDLPGIASLLKSSPDLEKLHIDVNPLNVLKFWEXQVFNNYYKYGDDHGESFWESEEKSFK 431
Query: 421 CLRTTLKTVQIFDFTGGSSE----TAFVEFLLNKSAVLQKMVIHSKKAQDVYGY 272
CL LK ++I F G + AF+EFLL + VL+KMVI+ +K + Y
Sbjct: 432 CLLQNLKIIKIVGFDPGYCDIQFAIAFIEFLLKNAQVLEKMVINVRKVKRQTSY 485
>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
vinifera]
Length = 610
Score = 82.4 bits (202), Expect = 1e-13
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 14/199 (7%)
Frame = -2
Query: 748 FQNLLRRTFESVCHAIVLSLSTRCLQVLSLLEQKMNVGSCSNCNRLELNTCLTKWELPGI 569
+ ++ + +SV H L++ T C+QVLS+ E K SN L L+T L KW+LPGI
Sbjct: 345 YHKVVMKLLKSVNHVKALTVGTWCIQVLSIFEGKDLSSLLSNLKCLILDTHLNKWDLPGI 404
Query: 568 KLLLRSSPTLQTLTIQKGDKCGR-------FCFDDGVFPKYDFDEVNYWNS---IMSFPC 419
LL+SS L+T I C + F F D ++FDE YW+S +++
Sbjct: 405 ANLLQSSTHLETFVINMISPCSQQISVEVGFSFTD----LHNFDEEKYWSSREGVLANSL 460
Query: 418 LRTTLKTVQ----IFDFTGGSSETAFVEFLLNKSAVLQKMVIHSKKAQDVYGYPPFTSDD 251
+ LKTV+ I++ G V+FLL + +L+K+ I +K+ D ++S
Sbjct: 461 I--NLKTVKIIGVIWNQPGIELVFGLVKFLLKNARMLEKVEICAKR--DSQSRSRWSS-- 514
Query: 250 MFKFSQKLLSFQRASPSAI 194
+Q LLSF RASP+A+
Sbjct: 515 -LNSAQSLLSFPRASPNAV 532
>ref|XP_004143230.1| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like
[Cucumis sativus] gi|449503744|ref|XP_004162155.1|
PREDICTED: putative F-box/LRR-repeat protein
At3g18150-like [Cucumis sativus]
Length = 512
Score = 80.5 bits (197), Expect = 4e-13
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 16/159 (10%)
Frame = -2
Query: 613 LELNTCLTKWELPGIKLLLRSSPTLQTLT--IQKGDKCGRFCFDDGVFPKYDFDEVNYWN 440
+E TKW +PGI +LR+S L+TLT I G + YDFD +YW
Sbjct: 353 VEFRLLFTKWHMPGICSILRNSHWLETLTFYIYPGSYSTFLTEEAKWMEAYDFDGKSYWK 412
Query: 439 SIMSF--PCLRTTLKTVQIFDFTGGSSETAFVEFLLNKSAVLQKMVIHSKKA-QDVYGY- 272
S LR LKTV+I+ + +EFLL + VL+KMVI +KK Q ++ Y
Sbjct: 413 SQNGDFRGGLRKYLKTVKIYGYVTEPYVLELIEFLLKNALVLEKMVISTKKTLQPIHQYE 472
Query: 271 ----------PPFTSDDMFKFSQKLLSFQRASPSAIVLF 185
FT ++ +FSQKLL+ RAS SA++ F
Sbjct: 473 LFKDAVFDQEDRFTPKELLQFSQKLLTLPRASKSAVIQF 511