BLASTX nr result

ID: Coptis21_contig00006591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006591
         (937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36916.1| unknown [Medicago truncatula]                          159   7e-37
gb|ACJ83949.1| unknown [Medicago truncatula] gi|388508204|gb|AFK...   156   6e-36
ref|XP_003534321.1| PREDICTED: 60S ribosomal protein L13-2 isofo...   156   8e-36
ref|XP_003522855.1| PREDICTED: 60S ribosomal protein L13-2-like ...   155   1e-35
ref|NP_001238240.1| uncharacterized protein LOC100499935 [Glycin...   155   1e-35

>gb|AFK36916.1| unknown [Medicago truncatula]
          Length = 207

 Score =  159 bits (403), Expect = 7e-37
 Identities = 83/118 (70%), Positives = 94/118 (79%)
 Frame = +1

Query: 505 QAMGIPKKFAPTIGIAVDHRRKMNRSLEGLQANALRLKTYKARLVVFLRCAHKYKAGDSS 684
           +A GIPKK APTIGI+VDHRRK NRSLEGLQAN  RLKTYKA+LVVF R A K KAGDS+
Sbjct: 81  KAAGIPKKLAPTIGISVDHRRK-NRSLEGLQANVQRLKTYKAKLVVFPRRARKTKAGDST 139

Query: 685 PEEFVAATQVPSSYMRVVAETPTVGLVKPTEDIKAFKAYAKLRIEMVNKKHFGVRTKR 858
           PEE   ATQV  SY+ +V E PTVGLVK T+++KAFKAY KLR+E  NK+H G R KR
Sbjct: 140 PEELANATQVQGSYLPIVREKPTVGLVKVTDEMKAFKAYYKLRLERTNKRHLGARLKR 197



 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 39/55 (70%), Positives = 48/55 (87%)
 Frame = +1

Query: 4   QPARKMRRYTVRKEKAMKIFPRPTAGPLRPITRGQTIKYNMKVKAGQGFSLEDVR 168
           QPARK RR   R++KA+KIFPRPTAGPLRPI  GQT KYNMK++AG+GFSLE+++
Sbjct: 27  QPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELK 81


>gb|ACJ83949.1| unknown [Medicago truncatula] gi|388508204|gb|AFK42168.1| unknown
           [Medicago truncatula]
          Length = 207

 Score =  156 bits (395), Expect = 6e-36
 Identities = 82/118 (69%), Positives = 93/118 (78%)
 Frame = +1

Query: 505 QAMGIPKKFAPTIGIAVDHRRKMNRSLEGLQANALRLKTYKARLVVFLRCAHKYKAGDSS 684
           +A GIPKK APTIGI+VDHRRK NRSLEGLQAN  RLKTYKA+LVVF R A K KAGDS+
Sbjct: 81  KAAGIPKKLAPTIGISVDHRRK-NRSLEGLQANVQRLKTYKAKLVVFPRRARKTKAGDST 139

Query: 685 PEEFVAATQVPSSYMRVVAETPTVGLVKPTEDIKAFKAYAKLRIEMVNKKHFGVRTKR 858
           PEE   ATQV  SY+ +V E PTV LVK T+++KAFKAY KLR+E  NK+H G R KR
Sbjct: 140 PEELANATQVQGSYLPIVREKPTVELVKVTDEMKAFKAYYKLRLERTNKRHLGARLKR 197



 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 39/55 (70%), Positives = 48/55 (87%)
 Frame = +1

Query: 4   QPARKMRRYTVRKEKAMKIFPRPTAGPLRPITRGQTIKYNMKVKAGQGFSLEDVR 168
           QPARK RR   R++KA+KIFPRPTAGPLRPI  GQT KYNMK++AG+GFSLE+++
Sbjct: 27  QPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELK 81


>ref|XP_003534321.1| PREDICTED: 60S ribosomal protein L13-2 isoform 1 [Glycine max]
           gi|356531513|ref|XP_003534322.1| PREDICTED: 60S
           ribosomal protein L13-2 isoform 2 [Glycine max]
          Length = 207

 Score =  156 bits (394), Expect = 8e-36
 Identities = 81/118 (68%), Positives = 93/118 (78%)
 Frame = +1

Query: 505 QAMGIPKKFAPTIGIAVDHRRKMNRSLEGLQANALRLKTYKARLVVFLRCAHKYKAGDSS 684
           +A GIPKK APTIGIAVDHRRK NRSLE LQAN  RLKTYKA+LVVF R AHK KAGDS+
Sbjct: 81  KAAGIPKKLAPTIGIAVDHRRK-NRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDST 139

Query: 685 PEEFVAATQVPSSYMRVVAETPTVGLVKPTEDIKAFKAYAKLRIEMVNKKHFGVRTKR 858
           PEE   ATQV  +++ +V E PTV LVK T+D+KAFKAY KLR+E  NK+H G R K+
Sbjct: 140 PEELANATQVQGAFLPIVREKPTVELVKVTDDMKAFKAYYKLRLERTNKRHHGARLKK 197



 Score = 87.0 bits (214), Expect = 6e-15
 Identities = 39/55 (70%), Positives = 48/55 (87%)
 Frame = +1

Query: 4   QPARKMRRYTVRKEKAMKIFPRPTAGPLRPITRGQTIKYNMKVKAGQGFSLEDVR 168
           QPARK RR   R++KA+KIFPRPTAGPLRPI  GQT+KYNMKV+ G+GFSLE+++
Sbjct: 27  QPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTLKYNMKVRGGRGFSLEELK 81


>ref|XP_003522855.1| PREDICTED: 60S ribosomal protein L13-2-like [Glycine max]
          Length = 207

 Score =  155 bits (393), Expect = 1e-35
 Identities = 81/118 (68%), Positives = 93/118 (78%)
 Frame = +1

Query: 505 QAMGIPKKFAPTIGIAVDHRRKMNRSLEGLQANALRLKTYKARLVVFLRCAHKYKAGDSS 684
           +A GIPKK APTIGIAVDHRRK NRSLE LQAN  RLKTYKA+LVVF R A K KAGDS+
Sbjct: 81  KAAGIPKKLAPTIGIAVDHRRK-NRSLESLQANVQRLKTYKAKLVVFPRRAQKVKAGDST 139

Query: 685 PEEFVAATQVPSSYMRVVAETPTVGLVKPTEDIKAFKAYAKLRIEMVNKKHFGVRTKR 858
           PEE   ATQV  S++ +V E PTV LVK T+D+KAFKAY KLR+E  NK+H+G R K+
Sbjct: 140 PEELANATQVQGSFLPIVREKPTVELVKVTDDMKAFKAYYKLRLERTNKRHYGARLKK 197



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 40/55 (72%), Positives = 49/55 (89%)
 Frame = +1

Query: 4   QPARKMRRYTVRKEKAMKIFPRPTAGPLRPITRGQTIKYNMKVKAGQGFSLEDVR 168
           QPARK RR   R++KA+KIFPRPTAGPLRPI  GQT+KYNMKV+AG+GFSLE+++
Sbjct: 27  QPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELK 81


>ref|NP_001238240.1| uncharacterized protein LOC100499935 [Glycine max]
           gi|255627819|gb|ACU14254.1| unknown [Glycine max]
          Length = 141

 Score =  155 bits (393), Expect = 1e-35
 Identities = 79/118 (66%), Positives = 94/118 (79%)
 Frame = +1

Query: 505 QAMGIPKKFAPTIGIAVDHRRKMNRSLEGLQANALRLKTYKARLVVFLRCAHKYKAGDSS 684
           +A+GIPKK  PTIGI+VDHRRK NRSLE LQAN  RLKTYKA+LVVF R AHK KAGDS+
Sbjct: 15  KAVGIPKKLGPTIGISVDHRRK-NRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDST 73

Query: 685 PEEFVAATQVPSSYMRVVAETPTVGLVKPTEDIKAFKAYAKLRIEMVNKKHFGVRTKR 858
           PEE   ATQV  S++ +V E PTV LVK T+++KAFKAY KLR+E  NK+H+G R K+
Sbjct: 74  PEELANATQVQGSFLPIVREKPTVDLVKVTDEMKAFKAYYKLRLERTNKRHYGARLKK 131


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