BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006578
         (2036 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28799.3| unnamed protein product [Vitis vinifera]              672   0.0  
ref|XP_002268685.1| PREDICTED: uncharacterized protein LOC100261...   652   0.0  
ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communi...   643   0.0  
emb|CAN79186.1| hypothetical protein VITISV_035853 [Vitis vinifera]   642   0.0  
ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago t...   608   e-171

>emb|CBI28799.3| unnamed protein product [Vitis vinifera]
          Length = 935

 Score =  672 bits (1734), Expect = 0.0
 Identities = 340/590 (57%), Positives = 414/590 (70%), Gaps = 4/590 (0%)
 Frame = +1

Query: 19   KELVGRLCMWRDLMARVHDESLRYVLSDQAIVAVASKVPTTAIEIYDTISEADLDVEFLX 198
            ++LV RLC WRDLMARVHDESLRYVLSDQAI+A+A KVPTT  EI   IS+ADL+V+ L 
Sbjct: 350  QDLVRRLCTWRDLMARVHDESLRYVLSDQAIIALADKVPTTQKEICTLISQADLNVDSLS 409

Query: 199  XXXXXXXXXXXXXXHLEDICDFLAGKISNLGDVFQTLPQKHLGPSGCCPLSIYNYALLTK 378
                          HLED       K+  L DVF  + QKHLGP G CPLS++NYA+L+K
Sbjct: 410  SSSILPSPSPVVCSHLEDFNYLFQDKMGKLDDVFLEILQKHLGPDGSCPLSVFNYAILSK 469

Query: 379  SNLRVTNGFSAKQNGIKSYKQFGRKASRSRQLFVKKFSCKSPVYHNCRIYASDGRLLCYC 558
            +NL++TN   +KQNGIK+ KQ G+KASR  +LFVKKFSCKSPVYHNCRI+ASDGRLLCYC
Sbjct: 470  TNLKLTNRLVSKQNGIKNSKQVGQKASR--ELFVKKFSCKSPVYHNCRIFASDGRLLCYC 527

Query: 559  DRRKLDWYLSRDLAKLVENDPPGIMLLFEPKGRPEDEDNDFYIQSKKNICVGCGERNHYL 738
            DRRKL+WY+ R LAKLV+++P  IMLLFEPKGRPEDEDNDFY+QSKKNICVGCGERNHYL
Sbjct: 528  DRRKLEWYVRRGLAKLVDDNPLAIMLLFEPKGRPEDEDNDFYVQSKKNICVGCGERNHYL 587

Query: 739  RYRIVPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSVAEKHKRQIAAEFGIPLFVKKV 918
            RYRI+PSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHS AEK+K++IAAEFGIPLFV+KV
Sbjct: 588  RYRIIPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSAAEKYKKKIAAEFGIPLFVQKV 647

Query: 919  TESSQTDIIDXXXXXXXXXXXXXXXPXXXXXXXXXXXXHGPNMPAKRREELTLIVMKYFG 1098
             +S +  +                 P            HGP MP+KR EEL   VMKY+G
Sbjct: 648  VDSREAQVASQLSTSEVNTVEAGVSPLQLRTAAMALLRHGPRMPSKRCEELRQTVMKYYG 707

Query: 1099 GRKISTDDLESALLVGMSPHQRRKHEKKRGLPFKHSTRGHLSSESNSNNADSIRPYTLTE 1278
            GR+I+ +DLE ALLVGMSPH+R++ E+K+G+  KHS      ++   +NA S+    +  
Sbjct: 708  GREITEEDLEKALLVGMSPHERKRLERKKGMSLKHSKGAGFPNKEQESNARSMGTSPIDN 767

Query: 1279 AIKWDYKNGPETATEANLGIDMDASTRNIHKGCESKVKGDAAATDGEDLNFNISSISN-K 1455
            A+K D + G  T      G            G + ++  +  A+D  +L+ + S  S  K
Sbjct: 768  ALKVDGEGGLNTTKGEACG--------KQENGNDLEITMEVLASDSNNLSSDRSETSEMK 819

Query: 1456 GKATDTGEDLEDKSLSDFTSQC---KPSGTVSSTYNQKMSLLGHGPHGKQVVDHLLKKYG 1626
                   ++ E +S S+ T      K +G  S  +N K+SLLGHGPHGK+VVDHLLK+YG
Sbjct: 820  DMCVMDTDNCESRSQSEGTLDLFYPKSNGNASPKHNPKLSLLGHGPHGKEVVDHLLKEYG 879

Query: 1627 EDGIRVFCQRWRQVFVGALHPRFLPSGWDVNHRGRRDFGEYSVYNPIKKS 1776
            EDGIR FCQRWRQ FV A+HPRFLP+GWDV H GRRDFGE+SVYNP KK+
Sbjct: 880  EDGIRQFCQRWRQTFVEAIHPRFLPAGWDVMHSGRRDFGEFSVYNPDKKA 929


>ref|XP_002268685.1| PREDICTED: uncharacterized protein LOC100261955 [Vitis vinifera]
          Length = 936

 Score =  652 bits (1681), Expect = 0.0
 Identities = 334/592 (56%), Positives = 401/592 (67%)
 Frame = +1

Query: 1    SSNSEAKELVGRLCMWRDLMARVHDESLRYVLSDQAIVAVASKVPTTAIEIYDTISEADL 180
            S   + ++LV RLC WRDLMARVHDESLRYVLSDQAI+A+A KVPTT  EI   IS+ADL
Sbjct: 342  SKACDLQDLVRRLCTWRDLMARVHDESLRYVLSDQAIIALADKVPTTQKEICTLISQADL 401

Query: 181  DVEFLXXXXXXXXXXXXXXXHLEDICDFLAGKISNLGDVFQTLPQKHLGPSGCCPLSIYN 360
            +V+ L               HLED       K+  L DVF  + QKHLGP G CPLS++N
Sbjct: 402  NVDSLSSSSILPSPSPVVCSHLEDFNYLFQDKMGKLDDVFLEILQKHLGPDGSCPLSVFN 461

Query: 361  YALLTKSNLRVTNGFSAKQNGIKSYKQFGRKASRSRQLFVKKFSCKSPVYHNCRIYASDG 540
            YA+L+K+NL++TN   +KQNGIK+ KQ G+KASR  +LFVKKFSCKSPVYHNCRI+ASDG
Sbjct: 462  YAILSKTNLKLTNRLVSKQNGIKNSKQVGQKASR--ELFVKKFSCKSPVYHNCRIFASDG 519

Query: 541  RLLCYCDRRKLDWYLSRDLAKLVENDPPGIMLLFEPKGRPEDEDNDFYIQSKKNICVGCG 720
            RLLCYCDRRKL+WY+ R LAKLV+++P  IMLLFEPKGRPEDEDNDFY+QSKKNICVGCG
Sbjct: 520  RLLCYCDRRKLEWYVRRGLAKLVDDNPLAIMLLFEPKGRPEDEDNDFYVQSKKNICVGCG 579

Query: 721  ERNHYLRYRIVPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSVAEKHKRQIAAEFGIP 900
            ERNHYLRYRI+PSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHS AEK+K++IAAEFGIP
Sbjct: 580  ERNHYLRYRIIPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSAAEKYKKKIAAEFGIP 639

Query: 901  LFVKKVTESSQTDIIDXXXXXXXXXXXXXXXPXXXXXXXXXXXXHGPNMPAKRREELTLI 1080
            LFV+KV +S +  +                 P            HGP MP+KR EEL   
Sbjct: 640  LFVQKVVDSREAQVASQLSTSEVNTVEAGVSPLQLRTAAMALLRHGPRMPSKRCEELRQT 699

Query: 1081 VMKYFGGRKISTDDLESALLVGMSPHQRRKHEKKRGLPFKHSTRGHLSSESNSNNADSIR 1260
            VMKY+GGR+I+ +DLE ALLVGMSPH+R++ E+K+G+  KHS      ++   +NA S+ 
Sbjct: 700  VMKYYGGREITEEDLEKALLVGMSPHERKRLERKKGMSLKHSKGAGFPNKEQESNARSMG 759

Query: 1261 PYTLTEAIKWDYKNGPETATEANLGIDMDASTRNIHKGCESKVKGDAAATDGEDLNFNIS 1440
               +  A+K D               DM     +    CES+ + +       DL +   
Sbjct: 760  TSPIDNALKVD---------------DMCVMDTD---NCESRSQSEGTL----DLFYP-- 795

Query: 1441 SISNKGKATDTGEDLEDKSLSDFTSQCKPSGTVSSTYNQKMSLLGHGPHGKQVVDHLLKK 1620
                                       K +G  S  +N K+SLLGHGPHGK+VVDHLLK+
Sbjct: 796  ---------------------------KSNGNASPKHNPKLSLLGHGPHGKEVVDHLLKE 828

Query: 1621 YGEDGIRVFCQRWRQVFVGALHPRFLPSGWDVNHRGRRDFGEYSVYNPIKKS 1776
            YGEDGIR FCQRWRQ FV A+HPRFLP+GWDV H GRRDFGE+SVYNP KK+
Sbjct: 829  YGEDGIRQFCQRWRQTFVEAIHPRFLPAGWDVMHSGRRDFGEFSVYNPDKKA 880


>ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communis]
            gi|223536557|gb|EEF38203.1| 3'-5' exonuclease, putative
            [Ricinus communis]
          Length = 977

 Score =  643 bits (1658), Expect = 0.0
 Identities = 340/631 (53%), Positives = 416/631 (65%), Gaps = 38/631 (6%)
 Frame = +1

Query: 1    SSNSEAKELVGRLCMWRDLMARVHDESLRYVLSDQAIVAVASKVPTTAIEIYDTISEADL 180
            S + E ++LV RLC WR+LMARVHDE LR+VLSDQAIV++A+KV T A+EIYDTI++AD 
Sbjct: 352  SVSCEIQDLVRRLCTWRELMARVHDEGLRFVLSDQAIVSLANKVSTNAMEIYDTIAQAD- 410

Query: 181  DVEFLXXXXXXXXXXXXXXXHLEDICDFLAGKISNLGDVFQTLPQKHLGPSGCCPLSIYN 360
            +++ +               H  D C  +    SNL D+F  L QK LGP+G CPLS+YN
Sbjct: 411  NMDPMNCISSQPSPSPVVCSHFYDFCCLIQENKSNLDDIFSLLLQKCLGPNGSCPLSVYN 470

Query: 361  YALLTKSNLRVTNGFSAKQNGIKSYKQFGRKASRSRQLFVKKFSCKSPVYHNCRIYASDG 540
            YALL   ++R+TN   +K+NG KS KQ  RKASRSR+LFV+KFSCKSPVYHNCRIYA+DG
Sbjct: 471  YALLISCDVRLTNRSMSKKNGFKSSKQVARKASRSRELFVQKFSCKSPVYHNCRIYANDG 530

Query: 541  RLLCYCDRRKLDWYLSRDLAKLVENDPPGIMLLFEPKGRPEDEDNDFYIQSKKNICVGCG 720
            RLLCYCDRRKL+WYL R+LA LV+ +PP I LLFEPKGRPEDEDNDFYIQSK+NICVGCG
Sbjct: 531  RLLCYCDRRKLEWYLHRELAILVDENPPAIRLLFEPKGRPEDEDNDFYIQSKRNICVGCG 590

Query: 721  ERNHYLRYRIVPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSVAEKHKRQIAAEFGIP 900
            E +HYLRYRI+PSCYR+HFPEHLKSHRSHDIVLLCVDCHEVAH+ AEK+KR +A EFGIP
Sbjct: 591  EGSHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKYKRHVAVEFGIP 650

Query: 901  LFVKKVTESSQTDIIDXXXXXXXXXXXXXXXPXXXXXXXXXXXXHGPNMPAKRREELTLI 1080
            LFV+KV +S ++ II                P            HGP MP KRREELT I
Sbjct: 651  LFVRKVVDSKESAIISESSSSLMTAEEAGVSPLQLRTAAMALLRHGPRMPPKRREELTQI 710

Query: 1081 VMKYFGGRKISTDDLESALLVGMSPHQRRKHEKKRGLPFKHSTRGHLSSESNSNNA---- 1248
            V +Y+GGR+IS +DLE ALLVGMSPH+RR+ EKKRGL  K S     S+    ++     
Sbjct: 711  VTQYYGGREISQEDLERALLVGMSPHERRRFEKKRGLSLKRSANNICSNNELVHDVTMVK 770

Query: 1249 DSIRPYTLTEAIKWDYKNGPETATEANLGIDMDASTRNIHKGCESKVK-GDAAATDGEDL 1425
             S+   ++T+          E  TE     D    T +   G  S ++  D +A   +D+
Sbjct: 771  SSVENNSITDTPDSSQTINSELRTEVKEDQDF-FKTTDPDVGVSSNLQVADVSAAAHKDM 829

Query: 1426 NFNISSISNKGKATDTGEDLEDKSLSDFTSQCKPSGTVSSTY-----------NQKMSLL 1572
            N N + +S+ GK    G D       D      P+G V S Y           N K+SLL
Sbjct: 830  NSNENEVSD-GKEICAGND------GDTCEINPPNGIVCSNYPTHGGHGLSKNNSKLSLL 882

Query: 1573 GHGPHGKQVVDHLLKKYGEDGIRVFCQRWRQVFVGALHPRFLPSGWDVNHR--------- 1725
            GHGPHGKQVV+HLLK+YG+DGIR FCQRWRQVFV A+HPRFLP+GWDV HR         
Sbjct: 883  GHGPHGKQVVEHLLKEYGDDGIREFCQRWRQVFVEAVHPRFLPAGWDVMHRQCPEHNTQS 942

Query: 1726 -------------GRRDFGEYSVYNPIKKST 1779
                         GRR+FGE+SVYNP K+++
Sbjct: 943  TILDLIVSAVFASGRREFGEFSVYNPTKRAS 973


>emb|CAN79186.1| hypothetical protein VITISV_035853 [Vitis vinifera]
          Length = 951

 Score =  642 bits (1657), Expect = 0.0
 Identities = 326/573 (56%), Positives = 398/573 (69%), Gaps = 4/573 (0%)
 Frame = +1

Query: 19   KELVGRLCMWRDLMARVHDESLRYVLSDQAIVAVASKVPTTAIEIYDTISEADLDVEFLX 198
            ++LV RLC WRDLMARVHDESLRYVLSDQAI+A+A KVPTT  EI   IS+ADL+V+ L 
Sbjct: 321  QDLVRRLCTWRDLMARVHDESLRYVLSDQAIIALADKVPTTQKEICTLISQADLNVDSLS 380

Query: 199  XXXXXXXXXXXXXXHLEDICDFLAGKISNLGDVFQTLPQKHLGPSGCCPLSIYNYALLTK 378
                          HLED       K+  L DVF  + QKHLGP G CPLS++NYA+L+K
Sbjct: 381  SSSILPSPSPVVCSHLEDFNYLFQDKMGKLDDVFLEILQKHLGPDGSCPLSVFNYAILSK 440

Query: 379  SNLRVTNGFSAKQNGIKSYKQFGRKASRSRQLFVKKFSCKSPVYHNCRIYASDGRLLCYC 558
            +NL++TN   +KQNGIK+ KQ G+KASR  +LFVKKFSCKSPVYHNCRI+ASDG+LLCYC
Sbjct: 441  TNLKLTNRLVSKQNGIKNSKQVGQKASR--ELFVKKFSCKSPVYHNCRIFASDGQLLCYC 498

Query: 559  DRRKLDWYLSRDLAKLVENDPPGIMLLFEPKGRPEDEDNDFYIQSKKNICVGCGERNHYL 738
            DRRKL+WY+ R LAKLV+++P  IMLLFEPKGRPEDEDNDFY+QSKKNICVGCGERNHYL
Sbjct: 499  DRRKLEWYVRRGLAKLVDDNPLAIMLLFEPKGRPEDEDNDFYVQSKKNICVGCGERNHYL 558

Query: 739  RYRIVPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSVAEKHKRQIAAEFGIPLFVKKV 918
            RYRI+PSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHS AEK+K++IAAEFGIPLFV+KV
Sbjct: 559  RYRIIPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSAAEKYKKKIAAEFGIPLFVQKV 618

Query: 919  TESSQTDIIDXXXXXXXXXXXXXXXPXXXXXXXXXXXXHGPNMPAKRREELTLIVMKYFG 1098
             +S +  +                 P            HGP MP+KR EEL   VMKY+G
Sbjct: 619  VDSREAQVASQLSTSEVNTVEAGVSPLQLRTAAMALLRHGPRMPSKRCEELRQTVMKYYG 678

Query: 1099 GRKISTDDLESALLVGMSPHQRRKHEKKRGLPFKHSTRGHLSSESNSNNADSIRPYTLTE 1278
            GR+I+ +DLE ALLVGMSPH+R++ E+K+G+  KHS      ++   +NA S+    +  
Sbjct: 679  GREITEEDLEKALLVGMSPHERKRLERKKGMSLKHSKGAGFPNKEQESNARSMGTSPIDN 738

Query: 1279 AIKWDYKNGPETATEANLGIDMDASTRNIHKGCESKVKGDAAATDGEDLNFNISSISN-K 1455
            A+K D + G  T      G            G + ++  +  A+D  +L+ + S  S  K
Sbjct: 739  ALKVDGEGGLNTTKGEACG--------KQENGNDLEITMEVLASDSNNLSSDRSETSEMK 790

Query: 1456 GKATDTGEDLEDKSLSDFTSQC---KPSGTVSSTYNQKMSLLGHGPHGKQVVDHLLKKYG 1626
                   ++ E +S S+ T      K  G  S  +N K+SLLGHGPHGK+VVDHLLK+YG
Sbjct: 791  DMCVMDTDNCESRSQSEGTLDLFYPKSBGNASPKHNPKLSLLGHGPHGKEVVDHLLKEYG 850

Query: 1627 EDGIRVFCQRWRQVFVGALHPRFLPSGWDVNHR 1725
            EDGIR FCQRWRQ FV A+HPRFLP+GWDV HR
Sbjct: 851  EDGIRQFCQRWRQTFVEAIHPRFLPAGWDVMHR 883


>ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
            gi|355506989|gb|AES88131.1| Exosome complex exonuclease
            RRP6 [Medicago truncatula]
          Length = 974

 Score =  608 bits (1569), Expect = e-171
 Identities = 319/599 (53%), Positives = 398/599 (66%), Gaps = 6/599 (1%)
 Frame = +1

Query: 1    SSNSEAKELVGRLCMWRDLMARVHDESLRYVLSDQAIVAVASKVPTTAIEIYDTISEADL 180
            S+ ++   +V +LC WRDLMAR+HDESL+YVLSDQAIVA+AS++P +  EIY++I + D+
Sbjct: 387  SNETQFLSIVRQLCTWRDLMARIHDESLKYVLSDQAIVALASRLPASNSEIYNSIVQTDV 446

Query: 181  DVEFLXXXXXXXXXXXXXXXHLEDICDFLAGKISNLGDVFQTLPQKHLGPSGCCPLSIYN 360
            + E                 HL DIC  LA K+ N GD++  + QK LG +G C L+I N
Sbjct: 447  NAE-TGLSSSIPSPSPVVCSHLTDICHLLANKLVNHGDIYSVILQKCLGQNGNCKLNISN 505

Query: 361  YALLTKSNLRVTNGFSAKQNGIKSYKQFGRKASRSRQLFVKKFSCKSPVYHNCRIYASDG 540
            YALL   N+R T   S+K++ +K+ +Q  +KASR+  LFVKKFSCKSPVYHNCRI+A+DG
Sbjct: 506  YALLVNCNVRPT--LSSKRSSLKNPRQHSKKASRN--LFVKKFSCKSPVYHNCRIFANDG 561

Query: 541  RLLCYCDRRKLDWYLSRDLAKLVENDPPGIMLLFEPKGRPEDEDNDFYIQSKKNICVGCG 720
            RLLCYCDR+KL+WYLSRDLAK+V+ +PP IMLLFEPKGRPEDE NDFYIQSKKNICVGCG
Sbjct: 562  RLLCYCDRKKLEWYLSRDLAKVVDEEPPAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCG 621

Query: 721  ERNHYLRYRIVPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSVAEKHKRQIAAEFGIP 900
            E NHYLRYRI+PSCYR+HFPEHLKSHRSHDIVLLCVDCHE AH+ AEK+KR++A+EFGIP
Sbjct: 622  EGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEAAHAAAEKYKRKVASEFGIP 681

Query: 901  LFVKKVTESSQTDIIDXXXXXXXXXXXXXXXPXXXXXXXXXXXXHGPNMPAKRREELTLI 1080
            L+V++V    Q                    P            HGP MP  RREELT I
Sbjct: 682  LYVRRVIHPGQ--------ETEKPNDEGGVSPLQLRSAAVALLRHGPRMPHDRREELTEI 733

Query: 1081 VMKYFGGRKISTDDLESALLVGMSPHQRRKHEKKRGLPFKHSTRGHLSSESNSNNADSIR 1260
            +  Y+GGR+IS +DLE AL VGM+PH+RRK EKKRG+  KHST    +     N+ D   
Sbjct: 734  IKTYYGGREISKEDLEKALQVGMTPHERRKFEKKRGVSSKHSTGSASAVPYEGNDTDYAP 793

Query: 1261 PYTLTEAIKWDYKNGPETATEANLGIDMDASTRNIHKGCESKVKGDAAATDGEDLNFNIS 1440
              +  + +K D  +G     E   G +    +        S +  D A ++G  +    +
Sbjct: 794  GMSNGDTLKVDTLDGSYVNEETRSGDNRQDDSGK--PSLASDLAVDKATSNGNTIVVKTT 851

Query: 1441 SISNKGKA---TDTGEDL---EDKSLSDFTSQCKPSGTVSSTYNQKMSLLGHGPHGKQVV 1602
               +   +    DT E L   +   +SD  S  K   T  + ++ K+SLLGHGPHGKQVV
Sbjct: 852  DHDDDETSYSLVDTDESLNKMQPNVVSDEES-IKDEDTTQAKHHSKLSLLGHGPHGKQVV 910

Query: 1603 DHLLKKYGEDGIRVFCQRWRQVFVGALHPRFLPSGWDVNHRGRRDFGEYSVYNPIKKST 1779
            DHLLK+YGEDGIR FCQRWRQVFV AL PRFLP GWDV H GRRDFGE+SVYN  K+ T
Sbjct: 911  DHLLKEYGEDGIREFCQRWRQVFVDALKPRFLPGGWDVKHSGRRDFGEFSVYNHQKRET 969