BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006573
         (1352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521713.1| dihydrodipicolinate synthase, putative [Rici...   612   e-173
ref|XP_002279840.1| PREDICTED: dihydrodipicolinate synthase 2, c...   593   e-167
ref|XP_002301301.1| predicted protein [Populus trichocarpa] gi|2...   587   e-165
ref|XP_004133905.1| PREDICTED: dihydrodipicolinate synthase 2, c...   578   e-162
pdb|3TUU|A Chain A, Structure Of Dihydrodipicolinate Synthase Fr...   578   e-162

>ref|XP_002521713.1| dihydrodipicolinate synthase, putative [Ricinus communis]
            gi|223539104|gb|EEF40700.1| dihydrodipicolinate synthase,
            putative [Ricinus communis]
          Length = 367

 Score =  612 bits (1579), Expect = e-173
 Identities = 287/349 (82%), Positives = 328/349 (93%)
 Frame = -2

Query: 1288 LQLPYSVASNHCSKNSGRWTSPKAAMMPNIHLPMRSLEVKNRTVSEDIKSLRLITAIKTP 1109
            LQLP+SV+++   + SG+W SP+AA++PN HLPMRS EVKNRT SEDIKSLRLITAIKTP
Sbjct: 18   LQLPHSVSTDFYKRRSGKWRSPQAAVIPNFHLPMRSFEVKNRTSSEDIKSLRLITAIKTP 77

Query: 1108 YLPDGRFDLEAYDALMHMQIVNGADGVIVGGTTGEGHLMTWDEHIMLIGHTVNCFGGSIK 929
            YLPDGRFDLEAYDAL++MQIVNGA+GVIVGGTTGEG LM+WDEHIMLIGHTVNCFGGSIK
Sbjct: 78   YLPDGRFDLEAYDALLNMQIVNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIK 137

Query: 928  VVGNTGSNSTREAVHASEQGFAVGMHAALHINPYYGKTSLDGLVSHFEAILNMGPSIIYN 749
            V+GNTGSNSTREA+HA+EQGFAVGMHAALHINPYYGKTSL+GLVSHF+++L MGP+IIYN
Sbjct: 138  VIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLVSHFDSVLPMGPTIIYN 197

Query: 748  VPSRTGQDIPPSVIHCIAPHANFAGIKECVGNDRIKEYTEKGIVVWSGNDDQCHDARWNF 569
            VPSRTGQDIPP VIH IA   N AG+KECVGNDR++EYTEKGIVVWSGNDDQCHD+RWN 
Sbjct: 198  VPSRTGQDIPPCVIHTIAQSPNLAGVKECVGNDRVEEYTEKGIVVWSGNDDQCHDSRWNH 257

Query: 568  GARGVITVTSNLVPGLMHELMFGGKNPSLNSKLMPLIEWLFREPNPIGMNTALAQLGVVR 389
            GA GVI+VTSNLVPGLM +L+F GKNP+LNSKL+PLI+WLF+EPNPIG+NTALAQLGVVR
Sbjct: 258  GATGVISVTSNLVPGLMRQLVFEGKNPALNSKLLPLIDWLFQEPNPIGLNTALAQLGVVR 317

Query: 388  PVFRLPYVPLPLSKRIEFVNIVKELGRENFVGEKDVQVLDDNDFILVGR 242
            PVFRLPYVPLPL++R+EFVN+VK +GRENFVGEKDV+VLDD+DFIL+GR
Sbjct: 318  PVFRLPYVPLPLAQRVEFVNLVKAIGRENFVGEKDVRVLDDDDFILIGR 366


>ref|XP_002279840.1| PREDICTED: dihydrodipicolinate synthase 2, chloroplastic [Vitis
            vinifera] gi|296089164|emb|CBI38867.3| unnamed protein
            product [Vitis vinifera]
          Length = 365

 Score =  593 bits (1530), Expect = e-167
 Identities = 278/351 (79%), Positives = 320/351 (91%)
 Frame = -2

Query: 1294 TTLQLPYSVASNHCSKNSGRWTSPKAAMMPNIHLPMRSLEVKNRTVSEDIKSLRLITAIK 1115
            +TLQ P     +   + + +W S +AA++PN HLPMRS EVKNRT  +DIKSLRLITAIK
Sbjct: 14   STLQFPRPNCGDINKRRNAKWKSAQAAVIPNFHLPMRSFEVKNRTSVDDIKSLRLITAIK 73

Query: 1114 TPYLPDGRFDLEAYDALMHMQIVNGADGVIVGGTTGEGHLMTWDEHIMLIGHTVNCFGGS 935
            TPYLPDGRFDLEAYDAL++MQIV+GA+GVIVGGTTGEG LM+WDEHIMLIGHTVNCFGGS
Sbjct: 74   TPYLPDGRFDLEAYDALVNMQIVDGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGS 133

Query: 934  IKVVGNTGSNSTREAVHASEQGFAVGMHAALHINPYYGKTSLDGLVSHFEAILNMGPSII 755
            IKV+GNTGSNSTREA+HA+EQGFAVGMHAALHINPYYGKTSL+GLVSHFE++L MGP++I
Sbjct: 134  IKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLVSHFESVLPMGPTVI 193

Query: 754  YNVPSRTGQDIPPSVIHCIAPHANFAGIKECVGNDRIKEYTEKGIVVWSGNDDQCHDARW 575
            YNVPSRTGQDIPP VIH +A  AN AG+KECVGNDRIK+YT+  IVVWSGNDDQCHDA+W
Sbjct: 194  YNVPSRTGQDIPPGVIHTVAQSANLAGVKECVGNDRIKQYTDNRIVVWSGNDDQCHDAKW 253

Query: 574  NFGARGVITVTSNLVPGLMHELMFGGKNPSLNSKLMPLIEWLFREPNPIGMNTALAQLGV 395
            ++GA GVI+VTSNL+PGLM +L+F GKNPSLN+K+MPL+ WLF EPNPIG+NTALAQLGV
Sbjct: 254  DYGATGVISVTSNLIPGLMRQLLFKGKNPSLNAKIMPLVNWLFEEPNPIGLNTALAQLGV 313

Query: 394  VRPVFRLPYVPLPLSKRIEFVNIVKELGRENFVGEKDVQVLDDNDFILVGR 242
            VRPVFRLPYVPLPL+KR+EFVNIVKE+GRENFVGEKDV+VLDD+DFILVGR
Sbjct: 314  VRPVFRLPYVPLPLAKRVEFVNIVKEIGRENFVGEKDVKVLDDDDFILVGR 364


>ref|XP_002301301.1| predicted protein [Populus trichocarpa] gi|222843027|gb|EEE80574.1|
            predicted protein [Populus trichocarpa]
          Length = 365

 Score =  587 bits (1513), Expect = e-165
 Identities = 274/351 (78%), Positives = 318/351 (90%)
 Frame = -2

Query: 1294 TTLQLPYSVASNHCSKNSGRWTSPKAAMMPNIHLPMRSLEVKNRTVSEDIKSLRLITAIK 1115
            +TLQ P     ++  +  G+W SP+AA +P++HLPMRS EVKNRT +EDIKSLRLITAIK
Sbjct: 14   STLQFPRPNCGDNYKRRGGKWRSPQAAAIPDLHLPMRSFEVKNRTSAEDIKSLRLITAIK 73

Query: 1114 TPYLPDGRFDLEAYDALMHMQIVNGADGVIVGGTTGEGHLMTWDEHIMLIGHTVNCFGGS 935
            TPYLPDGRFDLEAYDAL++MQIVNGA+GVIVGGTTGEG LM+WDEHIMLIGHTVNCFG S
Sbjct: 74   TPYLPDGRFDLEAYDALVNMQIVNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGSS 133

Query: 934  IKVVGNTGSNSTREAVHASEQGFAVGMHAALHINPYYGKTSLDGLVSHFEAILNMGPSII 755
            +KV+GNTGSNSTREA+HA+EQGFAVGMHAALHINPYYGKTS++G+VSHF+ +L MGP+II
Sbjct: 134  VKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSVEGMVSHFDCVLPMGPTII 193

Query: 754  YNVPSRTGQDIPPSVIHCIAPHANFAGIKECVGNDRIKEYTEKGIVVWSGNDDQCHDARW 575
            YNVPSRTGQDIPP VIH IA   N AG+KECVGNDR+++YT+KGIVVWSGNDDQCHDARW
Sbjct: 194  YNVPSRTGQDIPPRVIHTIAQSPNLAGVKECVGNDRVEQYTDKGIVVWSGNDDQCHDARW 253

Query: 574  NFGARGVITVTSNLVPGLMHELMFGGKNPSLNSKLMPLIEWLFREPNPIGMNTALAQLGV 395
            N GA GVI+VTSNL+PGLM +LMF GKN  LNSKL+PLI+WLF+EPNPI +NTALAQLGV
Sbjct: 254  NHGATGVISVTSNLLPGLMRKLMFEGKNSELNSKLLPLIDWLFQEPNPIALNTALAQLGV 313

Query: 394  VRPVFRLPYVPLPLSKRIEFVNIVKELGRENFVGEKDVQVLDDNDFILVGR 242
            VRPVFRLPY+PLPL+KRIEFVN+VK++GRENFVGE +VQVLDD+DFIL+ R
Sbjct: 314  VRPVFRLPYMPLPLAKRIEFVNLVKKIGRENFVGENNVQVLDDDDFILISR 364


>ref|XP_004133905.1| PREDICTED: dihydrodipicolinate synthase 2, chloroplastic-like
            [Cucumis sativus] gi|449518437|ref|XP_004166248.1|
            PREDICTED: dihydrodipicolinate synthase 2,
            chloroplastic-like [Cucumis sativus]
          Length = 367

 Score =  578 bits (1490), Expect = e-162
 Identities = 272/346 (78%), Positives = 313/346 (90%)
 Frame = -2

Query: 1279 PYSVASNHCSKNSGRWTSPKAAMMPNIHLPMRSLEVKNRTVSEDIKSLRLITAIKTPYLP 1100
            P   A    +K +  W SP+AA++PN+HLPMRSLEVKNRT+++DIKSLRL+TAIKTPYLP
Sbjct: 21   PSCNAKRQRTKRTVGWRSPQAAILPNLHLPMRSLEVKNRTIADDIKSLRLVTAIKTPYLP 80

Query: 1099 DGRFDLEAYDALMHMQIVNGADGVIVGGTTGEGHLMTWDEHIMLIGHTVNCFGGSIKVVG 920
            DGRFDLEAYDAL++ QI NGADGVIVGGTTGEG LM+WDEHIMLIGHTVNCFGGSIKV+G
Sbjct: 81   DGRFDLEAYDALVNRQIENGADGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG 140

Query: 919  NTGSNSTREAVHASEQGFAVGMHAALHINPYYGKTSLDGLVSHFEAILNMGPSIIYNVPS 740
            NTGSNSTREA+HASEQGFAVGMHAALHINPYYGKTS++GL+SHF  +L+MGP+IIYNVP 
Sbjct: 141  NTGSNSTREAIHASEQGFAVGMHAALHINPYYGKTSIEGLISHFNCVLSMGPTIIYNVPG 200

Query: 739  RTGQDIPPSVIHCIAPHANFAGIKECVGNDRIKEYTEKGIVVWSGNDDQCHDARWNFGAR 560
            RTGQDIPP VI  +A  AN AG+KECVGNDRI++YT++GIV+WSGNDDQCHDARWN GA 
Sbjct: 201  RTGQDIPPYVIQTVAESANLAGVKECVGNDRIEQYTKQGIVIWSGNDDQCHDARWNHGAT 260

Query: 559  GVITVTSNLVPGLMHELMFGGKNPSLNSKLMPLIEWLFREPNPIGMNTALAQLGVVRPVF 380
            GVI+VTSNLVPGLM ELMF GKNPSLN+KL+PL++WLF EPNPIG+NTALAQLGVVRPVF
Sbjct: 261  GVISVTSNLVPGLMRELMFEGKNPSLNAKLLPLMDWLFCEPNPIGLNTALAQLGVVRPVF 320

Query: 379  RLPYVPLPLSKRIEFVNIVKELGRENFVGEKDVQVLDDNDFILVGR 242
            RLPYVPLP +KR EFV +V+++GRE+FVG KDVQVLDD+DFILV R
Sbjct: 321  RLPYVPLPKTKREEFVKLVEQIGREHFVGVKDVQVLDDDDFILVSR 366


>pdb|3TUU|A Chain A, Structure Of Dihydrodipicolinate Synthase From The Common
            Grapevine gi|400261064|pdb|3TUU|B Chain B, Structure Of
            Dihydrodipicolinate Synthase From The Common Grapevine
            gi|400261065|pdb|3TUU|C Chain C, Structure Of
            Dihydrodipicolinate Synthase From The Common Grapevine
            gi|400261066|pdb|3TUU|D Chain D, Structure Of
            Dihydrodipicolinate Synthase From The Common Grapevine
            gi|400261067|pdb|3TUU|E Chain E, Structure Of
            Dihydrodipicolinate Synthase From The Common Grapevine
            gi|400261068|pdb|3TUU|F Chain F, Structure Of
            Dihydrodipicolinate Synthase From The Common Grapevine
            gi|400261069|pdb|3TUU|G Chain G, Structure Of
            Dihydrodipicolinate Synthase From The Common Grapevine
            gi|400261070|pdb|3TUU|H Chain H, Structure Of
            Dihydrodipicolinate Synthase From The Common Grapevine
          Length = 346

 Score =  578 bits (1490), Expect = e-162
 Identities = 270/325 (83%), Positives = 306/325 (94%)
 Frame = -2

Query: 1216 AMMPNIHLPMRSLEVKNRTVSEDIKSLRLITAIKTPYLPDGRFDLEAYDALMHMQIVNGA 1037
            A++PN HLPMRS EVKNRT  +DIKSLRLITAIKTPYLPDGRFDLEAYDAL++MQIV+GA
Sbjct: 21   AVIPNFHLPMRSFEVKNRTSVDDIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQIVDGA 80

Query: 1036 DGVIVGGTTGEGHLMTWDEHIMLIGHTVNCFGGSIKVVGNTGSNSTREAVHASEQGFAVG 857
            +GVIVGGTTGEG LM+WDEHIMLIGHTVNCFGGSIKV+GNTGSNSTREA+HA+EQGFAVG
Sbjct: 81   EGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVG 140

Query: 856  MHAALHINPYYGKTSLDGLVSHFEAILNMGPSIIYNVPSRTGQDIPPSVIHCIAPHANFA 677
            MHAALHINPYYGKTSL+GLVSHFE++L MGP++IYNVPSRTGQDIPP VIH +A  AN A
Sbjct: 141  MHAALHINPYYGKTSLEGLVSHFESVLPMGPTVIYNVPSRTGQDIPPGVIHTVAQSANLA 200

Query: 676  GIKECVGNDRIKEYTEKGIVVWSGNDDQCHDARWNFGARGVITVTSNLVPGLMHELMFGG 497
            G+ ECVGNDRIK+YT+  IVVWSGNDDQCHDA+W++GA GVI+VTSNL+PGLM +L+F G
Sbjct: 201  GVXECVGNDRIKQYTDNRIVVWSGNDDQCHDAKWDYGATGVISVTSNLIPGLMRQLLFKG 260

Query: 496  KNPSLNSKLMPLIEWLFREPNPIGMNTALAQLGVVRPVFRLPYVPLPLSKRIEFVNIVKE 317
            KNPSLN+K+MPL+ WLF EPNPIG+NTALAQLGVVRPVFRLPYVPLPL+KR+EFVNIVKE
Sbjct: 261  KNPSLNAKIMPLVNWLFEEPNPIGLNTALAQLGVVRPVFRLPYVPLPLAKRVEFVNIVKE 320

Query: 316  LGRENFVGEKDVQVLDDNDFILVGR 242
            +GRENFVGEKDV+VLDD+DFILVGR
Sbjct: 321  IGRENFVGEKDVKVLDDDDFILVGR 345