BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006553
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ40865.1| bHLH transcriptional factor [Coptis japonica]         418   e-115
dbj|BAJ41095.1| transcriptional factor CjbHLH1 [Coptis japonica ...   255   6e-66
ref|XP_001768919.1| predicted protein [Physcomitrella patens sub...    70   5e-10
ref|XP_002282369.1| PREDICTED: transcription factor bHLH95 [Viti...    67   4e-09
dbj|BAJ93630.1| predicted protein [Hordeum vulgare subsp. vulgare]     65   2e-08

>dbj|BAJ40865.1| bHLH transcriptional factor [Coptis japonica]
          Length = 228

 Score =  418 bits (1074), Expect = e-115
 Identities = 217/219 (99%), Positives = 218/219 (99%)
 Frame = +2

Query: 2   ETVSSEGKSSGAPIDARERHKLAERERRKSMRELFLSLHALLPHGNTVRKEQSSILDEII 181
           ETVSSEGKSSGAPIDARERHKLAERERRKSMRELFLSLHALLPHGNTVRKEQSSILDEII
Sbjct: 10  ETVSSEGKSSGAPIDARERHKLAERERRKSMRELFLSLHALLPHGNTVRKEQSSILDEII 69

Query: 182 KYIPLASARLKSLQNRKESTPLSTRPILASPSIQVSDRKSSGSSNSTDCDIRVAPEPSAS 361
           KYIPLASARLKSLQNRKESTPLSTRP LASPSIQVSDRKSSGSSNSTDCDIRVAPEPSAS
Sbjct: 70  KYIPLASARLKSLQNRKESTPLSTRPKLASPSIQVSDRKSSGSSNSTDCDIRVAPEPSAS 129

Query: 362 VAIRVRGDRVNVSLTDTKGTAKTLLLSAIFDELDAHNLELVRSTHCRDGSKVLHHSESKI 541
           VAIRVRGDRVNVSLTDTKGTA+TLLLSAIFDELDAHNLELVRSTHCRDGSKVLHHSESKI
Sbjct: 130 VAIRVRGDRVNVSLTDTKGTAQTLLLSAIFDELDAHNLELVRSTHCRDGSKVLHHSESKI 189

Query: 542 SDGLERSPGLLKTRLQELAGRLHKLRKSSSHKRTFDQLD 658
           SDGLERSPGLLKTRLQELAGRLHKLRKSSSHKRTFDQLD
Sbjct: 190 SDGLERSPGLLKTRLQELAGRLHKLRKSSSHKRTFDQLD 228


>dbj|BAJ41095.1| transcriptional factor CjbHLH1 [Coptis japonica var. dissecta]
          Length = 206

 Score =  255 bits (651), Expect = 6e-66
 Identities = 134/138 (97%), Positives = 135/138 (97%)
 Frame = +2

Query: 2   ETVSSEGKSSGAPIDARERHKLAERERRKSMRELFLSLHALLPHGNTVRKEQSSILDEII 181
           ETVSSEGKSSGAPIDARERHKLAERERRKSMRELFLSLHALLPHGNTVRKEQSSILDEII
Sbjct: 35  ETVSSEGKSSGAPIDARERHKLAERERRKSMRELFLSLHALLPHGNTVRKEQSSILDEII 94

Query: 182 KYIPLASARLKSLQNRKESTPLSTRPILASPSIQVSDRKSSGSSNSTDCDIRVAPEPSAS 361
           KYIPLASARLKSLQNRKESTPLSTRP LASPSIQVSDRKSSGSSNST CDIRVAPEPSAS
Sbjct: 95  KYIPLASARLKSLQNRKESTPLSTRPKLASPSIQVSDRKSSGSSNSTXCDIRVAPEPSAS 154

Query: 362 VAIRVRGDRVNVSLTDTK 415
           VAIRVRGDRV VSLTDT+
Sbjct: 155 VAIRVRGDRVXVSLTDTR 172


>ref|XP_001768919.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162679831|gb|EDQ66273.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 532

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
 Frame = +2

Query: 17  EGKSSGA-PIDARERHKLAERERRKSMRELFLSLHALLPHGNTVRKEQSSILDEIIKYIP 193
           + K SG  P+  RE H  +ERERRK M  LF  L  LLPH  T + ++S+++ EIIKYI 
Sbjct: 252 KSKGSGKRPVSQRENHIWSERERRKGMNCLFTRLRNLLPH-PTSKTDKSTVIGEIIKYIQ 310

Query: 194 LASARLKSLQNRKESTPLSTRPILASPSIQVSDRKS------SGSSNSTDCDIRVAPEP- 352
               +L+ L  +++    +   +LA P + VS+         S    S+   I   P P 
Sbjct: 311 SLQVKLEMLTKKRQQVMAA---VLARPGMFVSNNSGLTLVDHSNFDPSSMTAITALPPPG 367

Query: 353 ---------SASVAIRVRGDRVNVSLTDTKGTAKTLLLSAIFDELDAHNLELVRSTHCRD 505
                      +V + V G  +NV +T +    +  LL  +   +  H L+++ +T    
Sbjct: 368 KESCLQSYLGTNVGLHVCG--LNVFITTSSPRGRQGLLQQLLVTIHKHQLDVINATISTS 425

Query: 506 GSKVLHHSESKISDGLERSPGLLKTRLQEL 595
            + V H    + S   E     L + LQ +
Sbjct: 426 STSVFHCLHCQASQNAEVLNNDLHSALQSI 455


>ref|XP_002282369.1| PREDICTED: transcription factor bHLH95 [Vitis vinifera]
           gi|147766738|emb|CAN74162.1| hypothetical protein
           VITISV_026442 [Vitis vinifera]
           gi|297741258|emb|CBI32389.3| unnamed protein product
           [Vitis vinifera]
          Length = 305

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
 Frame = +2

Query: 14  SEGKSSGAP--IDARERHKLAERERRKSMRELFLSLHALLPHGNTVRKEQSSILDEIIKY 187
           +EGKS G        E H   ERERRK MR +F SLHALLP     + ++S+I+DE + Y
Sbjct: 78  NEGKSGGGGGGESDHEIHIWTERERRKKMRNMFSSLHALLPQ-LPPKADKSTIVDEAVNY 136

Query: 188 IPLASARLKSLQNRK-----ESTPLSTRP-ILASPSIQVSDRKSSGSSNSTDCDIRVAPE 349
           I      L+ LQ +K      +T ++  P I+ S  +    R++  +   +  ++ + P 
Sbjct: 137 IKTLQHTLQKLQKQKLERLQGATTVNYEPSIITSQKLAFDSREAFLADQGSSSNLAITPS 196

Query: 350 PSA------------------SVAIRVRGDRVNVSLTDTKGTAKTLLLSAIFDELDAHNL 475
            S+                  +V + V G+   +S+   K   K  LL+ I   L+ H L
Sbjct: 197 NSSNSLSVARVPAVFQSWTSPNVTLNVCGNEAQISVCSPK---KPGLLTTICYVLEKHKL 253

Query: 476 ELVRSTHCRDGSKVLHHSESKISDGLERSP 565
           E++ +    D ++ ++  ++  +  L++ P
Sbjct: 254 EVISAHVSSDYNRSMYMIQTNANGALDQFP 283


>dbj|BAJ93630.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 253

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 4/210 (1%)
 Frame = +2

Query: 11  SSEGKSSGAPIDARE-RHKLAERERRKSMRELFLSLHALLPHGNTVRK-EQSSILDEIIK 184
           +S G  SG P   ++  H   ER+RRK + EL+LSL +LLP  +  +K    + +   +K
Sbjct: 62  ASSGSGSGGPGSHKKLSHNAYERDRRKQLNELYLSLRSLLPDADHTKKLSIPTTVCRALK 121

Query: 185 YIPLASARLKSLQNRKESTPLSTRPILASPSIQVSDRKSSGSSNSTDCDIRVAPEPSASV 364
           YIP    ++++L+ +KE         LAS + +      SGS         +AP  SA+ 
Sbjct: 122 YIPELQKQVENLEKKKEK--------LASANCKPGVLSVSGS---------IAPTVSAT- 163

Query: 365 AIRVRGDRVNVSLTDTKGTAKTLLLSAIFDELDAHNLELV-RSTHCRDGSKVLHHSESKI 541
            +  +   V +S++  K  A TL LS   + L+   L+L+  ST    G+K+ ++     
Sbjct: 164 CLNDKEIMVQISMSRDKDAATTLPLSKCINVLENEGLQLISSSTSSTFGNKMFYNLH--- 220

Query: 542 SDGLERSPGLLKTRLQELAGRLHK-LRKSS 628
              L+RS G L         +L + +RK++
Sbjct: 221 ---LQRSQGALNMECPSFCDKLEQAIRKTA 247