BLASTX nr result

ID: Coptis21_contig00006545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006545
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521591.1| GATA transcription factor, putative [Ricinus...    57   2e-06

>ref|XP_002521591.1| GATA transcription factor, putative [Ricinus communis]
           gi|223539269|gb|EEF40862.1| GATA transcription factor,
           putative [Ricinus communis]
          Length = 332

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 43/137 (31%), Positives = 51/137 (37%), Gaps = 5/137 (3%)
 Frame = -2

Query: 396 NSFSPCSSCGFYQXXXXXXXXXXXXXXNHQQQQYDEVDAYSF-----NSSSSVDCTLSLG 232
           N+   C+ CG +               NH    YDE D Y F     +SSSSVDCTLSLG
Sbjct: 88  NTVGQCT-CGLFHTQTNSFTMLFSMPNNHPHNSYDETDMYPFPSSSSSSSSSVDCTLSLG 146

Query: 231 TPSTRQSNNNFVDHQHXXXXXXXXXXXXXXSWDIFQTXXXXXXXXXXXXXSXXXXXXXXX 52
           TPSTR   ++  D +                WDI Q              +         
Sbjct: 147 TPSTRLCEDD--DKRSICHDRRPTSCMSNFCWDILQNKNTPYSPQNHKTTARGSNTTTNS 204

Query: 51  XXXXXXXXLARRCANCD 1
                   LARRCANCD
Sbjct: 205 NSANNDPLLARRCANCD 221


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