BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006530
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-a...   107   1e-21
emb|CBI40185.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_004138833.1| PREDICTED: probable U3 small nucleolar RNA-a...   105   7e-21
ref|XP_003556293.1| PREDICTED: probable U3 small nucleolar RNA-a...    82   7e-14
ref|XP_002531133.1| WD-repeat protein, putative [Ricinus communi...    82   9e-14

>ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-associated protein 7
           [Vitis vinifera]
          Length = 610

 Score =  107 bits (268), Expect = 1e-21
 Identities = 76/189 (40%), Positives = 98/189 (51%), Gaps = 58/189 (30%)
 Frame = -1

Query: 589 IKMLCHHGPVSAMAFHPGGHLMATAGMEPKIKLWDLRKFEVLHT---------------- 458
           +KMLCHHGP+SA+AFHP GHLMATAGM+ KIKLWDLRKFEVL T                
Sbjct: 348 VKMLCHHGPISALAFHPNGHLMATAGMDKKIKLWDLRKFEVLQTLPGHAKTLDFSQKGLL 407

Query: 457 ------YEDVLG---RAWSLNVYILHSCAR-------LWRA*F*Y---------LGWQIH 353
                 +  +LG      + + Y+ HS A+       L+R    Y         +GW   
Sbjct: 408 ATGTGSFVQILGDFSGTENYSRYMGHSMAKGYQIGKVLFRP---YEDVLSIGHSMGWSCI 464

Query: 352 L---------------KLQASGREKE--VHALLYKLPPETIMLDPTKIGTVLL*DREERK 224
           L                 + S + +E  VH+LL KLPPETIMLDPTKIGTV    R+ RK
Sbjct: 465 LIPGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLDPTKIGTV----RQSRK 520

Query: 223 NNRLSRREK 197
             + +++E+
Sbjct: 521 REKPTKQER 529


>emb|CBI40185.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  107 bits (268), Expect = 1e-21
 Identities = 76/189 (40%), Positives = 98/189 (51%), Gaps = 58/189 (30%)
 Frame = -1

Query: 589 IKMLCHHGPVSAMAFHPGGHLMATAGMEPKIKLWDLRKFEVLHT---------------- 458
           +KMLCHHGP+SA+AFHP GHLMATAGM+ KIKLWDLRKFEVL T                
Sbjct: 274 VKMLCHHGPISALAFHPNGHLMATAGMDKKIKLWDLRKFEVLQTLPGHAKTLDFSQKGLL 333

Query: 457 ------YEDVLG---RAWSLNVYILHSCAR-------LWRA*F*Y---------LGWQIH 353
                 +  +LG      + + Y+ HS A+       L+R    Y         +GW   
Sbjct: 334 ATGTGSFVQILGDFSGTENYSRYMGHSMAKGYQIGKVLFRP---YEDVLSIGHSMGWSCI 390

Query: 352 L---------------KLQASGREKE--VHALLYKLPPETIMLDPTKIGTVLL*DREERK 224
           L                 + S + +E  VH+LL KLPPETIMLDPTKIGTV    R+ RK
Sbjct: 391 LIPGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLDPTKIGTV----RQSRK 446

Query: 223 NNRLSRREK 197
             + +++E+
Sbjct: 447 REKPTKQER 455


>ref|XP_004138833.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           7-like [Cucumis sativus]
           gi|449528879|ref|XP_004171429.1| PREDICTED: probable U3
           small nucleolar RNA-associated protein 7-like [Cucumis
           sativus]
          Length = 536

 Score =  105 bits (261), Expect = 7e-21
 Identities = 74/184 (40%), Positives = 94/184 (51%), Gaps = 59/184 (32%)
 Frame = -1

Query: 589 IKMLCHHGPVSAMAFHPGGHLMATAGMEPKIKLWDLRKFEVLHT---------------- 458
           +KMLCH GPVSA+AFHP GHLMAT+G E KIKLWDLRKFEVL T                
Sbjct: 274 VKMLCHPGPVSALAFHPNGHLMATSGAERKIKLWDLRKFEVLQTLPGHAKTLDFSQKGLL 333

Query: 457 ------YEDVLG---RAWSLNVYILHSCAR-------LWRA*F*Y---------LGWQIH 353
                 +  +LG    A + N Y+ HS A+       L+R    Y         +GW   
Sbjct: 334 AYGTGSFVQILGDFSGAQNYNRYMAHSMAKGYQIGKILFRP---YEDVLGIGHSMGWS-S 389

Query: 352 LKLQASG------------------REKEVHALLYKLPPETIMLDPTKIGTVLL*DREER 227
           + +  SG                  REKEV +LL KLPPETI L+PTKIGT++   ++E+
Sbjct: 390 ILIPGSGEPNFDTWVANPFETSKQRREKEVRSLLDKLPPETISLNPTKIGTLMAVKKKEK 449

Query: 226 KNNR 215
           K  +
Sbjct: 450 KTKK 453


>ref|XP_003556293.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           7-like [Glycine max]
          Length = 535

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 36/44 (81%), Positives = 39/44 (88%)
 Frame = -1

Query: 589 IKMLCHHGPVSAMAFHPGGHLMATAGMEPKIKLWDLRKFEVLHT 458
           +KMLCHHGPVSA+AFH  GHLMATAG + KIKLWDLRKFEVL T
Sbjct: 274 VKMLCHHGPVSALAFHSNGHLMATAGKDKKIKLWDLRKFEVLQT 317



 Score = 48.1 bits (113), Expect(2) = 3e-11
 Identities = 22/27 (81%), Positives = 25/27 (92%)
 Frame = -1

Query: 331 REKEVHALLYKLPPETIMLDPTKIGTV 251
           REKE+ +LL KLPPETIMLDP+KIGTV
Sbjct: 415 REKEIRSLLDKLPPETIMLDPSKIGTV 441



 Score = 45.4 bits (106), Expect(2) = 3e-11
 Identities = 18/24 (75%), Positives = 22/24 (91%)
 Frame = -2

Query: 438 GLGHSMCISSILVPGSGEPNFDTW 367
           G+GHSM  SSIL+PG+GEPNFD+W
Sbjct: 380 GIGHSMGWSSILIPGAGEPNFDSW 403


>ref|XP_002531133.1| WD-repeat protein, putative [Ricinus communis]
           gi|223529282|gb|EEF31253.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 526

 Score = 81.6 bits (200), Expect = 9e-14
 Identities = 37/44 (84%), Positives = 39/44 (88%)
 Frame = -1

Query: 589 IKMLCHHGPVSAMAFHPGGHLMATAGMEPKIKLWDLRKFEVLHT 458
           IKMLCH GPV AMAFHP GHLMAT+GME KIK+WDLRKFEVL T
Sbjct: 263 IKMLCHPGPVLAMAFHPNGHLMATSGMERKIKIWDLRKFEVLQT 306