BLASTX nr result

ID: Coptis21_contig00006514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006514
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265574.1| PREDICTED: cell division topological specifi...   286   5e-75
ref|XP_002278852.2| PREDICTED: cell division topological specifi...   278   1e-72
gb|ABK96556.1| unknown [Populus trichocarpa x Populus deltoides]      275   1e-71
ref|XP_002512131.1| conserved hypothetical protein [Ricinus comm...   273   4e-71
ref|XP_002312270.1| predicted protein [Populus trichocarpa] gi|2...   273   4e-71

>ref|XP_002265574.1| PREDICTED: cell division topological specificity factor homolog,
           chloroplastic [Vitis vinifera]
           gi|296088282|emb|CBI36508.3| unnamed protein product
           [Vitis vinifera]
          Length = 225

 Score =  286 bits (732), Expect = 5e-75
 Identities = 147/228 (64%), Positives = 183/228 (80%), Gaps = 5/228 (2%)
 Frame = +1

Query: 37  MAISGDLRVCATMAS-----VRRYFPPSKVGFNSFQTGGSSVSEVMHKWPRIELDGHSMR 201
           MA+SGDLRV AT++S     +R     SKVGF     G SS+ ++  +WP + L+GH + 
Sbjct: 1   MAVSGDLRVVATLSSYPTHPLRSSLLSSKVGFAGALNGESSIPDITPRWPSLVLNGHPVH 60

Query: 202 CESQRSWSFGIIGDNQISAKPVNEETEGLLLSAINMSFLERLDLAWKILFPPPATVRNSN 381
           C S+R   FGI+GDN++S + +++E E LLL+AINM+FLERL+LAWKI+FPP  T R+SN
Sbjct: 61  CHSKRI--FGIMGDNKLSPRSISQEAESLLLNAINMNFLERLNLAWKIIFPPQKT-RHSN 117

Query: 382 ARIAKQRLKMILFSDRCAVSDEAKQKIVSNVVGALSDFVEIESRDKVHLSVSTDPDLGTI 561
           ARIAKQRL+MILFSDRCAVSDEAKQKIV+N+V ALSDFVEIES+DKV LSVSTDP+LGT+
Sbjct: 118 ARIAKQRLQMILFSDRCAVSDEAKQKIVNNIVHALSDFVEIESQDKVQLSVSTDPNLGTV 177

Query: 562 YSVTVPVRRVKSKYQVEDESGMITNVEYKDTGDSSGTVDVKFDFFVPT 705
           YSVTVPVRRVK +YQ  DE G I N+EYKD GDSSG+VDV+FDF +P+
Sbjct: 178 YSVTVPVRRVKPEYQAVDEMGTIANIEYKDNGDSSGSVDVRFDFVIPS 225


>ref|XP_002278852.2| PREDICTED: cell division topological specificity factor homolog,
           chloroplastic-like [Vitis vinifera]
           gi|296082964|emb|CBI22265.3| unnamed protein product
           [Vitis vinifera]
          Length = 233

 Score =  278 bits (711), Expect = 1e-72
 Identities = 146/235 (62%), Positives = 174/235 (74%), Gaps = 8/235 (3%)
 Frame = +1

Query: 37  MAISGDLRVCATMASVR------RYFPPSKVGFNSFQTGGSSVSEVMHKWPRIELDGHSM 198
           MAI GDLRV A     R         PPSKV F  F  GGS  SE+M KW  +E++ +  
Sbjct: 1   MAICGDLRVSAAPMGFRFKHPFGASLPPSKVRFKHFTNGGSDSSEIMPKWSCMEMERYKT 60

Query: 199 RCESQRSWSFGIIGDNQISAKPVNEETEGLLLSAINMSFLERLDLAWKILFPPPATVRNS 378
            C   +   FG+ G N++  +P+ ++ EG L    +MSF ERL+LAWKILFP P T RNS
Sbjct: 61  WCHYNQP--FGVTGANRLPMEPITQDAEGFLHKMTSMSFFERLNLAWKILFPSPTTRRNS 118

Query: 379 NARIAKQRLKMILFSDRCAVSDEAKQKIVSNVVGALSDFVEIESRDKVHLSVSTDPDLGT 558
           NARIAKQRLKMILFSDRC VSD+AKQKIVSN+VGALS+FVEI+S+DKVHL+VSTDPDLGT
Sbjct: 119 NARIAKQRLKMILFSDRCVVSDDAKQKIVSNIVGALSEFVEIDSQDKVHLNVSTDPDLGT 178

Query: 559 IYSVTVPVRRVKSKYQ--VEDESGMITNVEYKDTGDSSGTVDVKFDFFVPTE*SQ 717
           +YS+TVPVRRVKSKYQ   EDE  +ITN+EYKDTG+ S +VDV+FDFFVP E SQ
Sbjct: 179 VYSITVPVRRVKSKYQDEDEDEDRIITNIEYKDTGERSDSVDVRFDFFVPNENSQ 233


>gb|ABK96556.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 226

 Score =  275 bits (702), Expect = 1e-71
 Identities = 146/230 (63%), Positives = 176/230 (76%), Gaps = 6/230 (2%)
 Frame = +1

Query: 37  MAISGDLRVCATMASVRRYF----PPS--KVGFNSFQTGGSSVSEVMHKWPRIELDGHSM 198
           MAISGDLRV AT+AS  ++     PPS  KV F  F  GG   S+ M KWP  ++ GH  
Sbjct: 1   MAISGDLRVSATLASYSKHLLCSLPPSNSKVEFLGFLNGGCGTSQNMLKWPGFKIHGHFK 60

Query: 199 RCESQRSWSFGIIGDNQISAKPVNEETEGLLLSAINMSFLERLDLAWKILFPPPATVRNS 378
           R       S GI  D Q+S+  +N+E E LLLSAINMSF ERL+LAW+I+FP P   ++S
Sbjct: 61  R-------SAGIAEDYQLSSTAINQEAESLLLSAINMSFFERLNLAWRIIFPSPTQRKSS 113

Query: 379 NARIAKQRLKMILFSDRCAVSDEAKQKIVSNVVGALSDFVEIESRDKVHLSVSTDPDLGT 558
           NARIAKQRLKMILFSDRCAVSDEAK+KIV+N+V ALS+FVEIES+DKV LSV+TD DLGT
Sbjct: 114 NARIAKQRLKMILFSDRCAVSDEAKRKIVNNIVHALSEFVEIESQDKVQLSVTTDTDLGT 173

Query: 559 IYSVTVPVRRVKSKYQVEDESGMITNVEYKDTGDSSGTVDVKFDFFVPTE 708
           +YSVTVPV RVK  YQ E+ESG ITN+EYKDTG++SG+VDV+FDF++P E
Sbjct: 174 VYSVTVPVHRVKPGYQGEEESGSITNIEYKDTGETSGSVDVRFDFYIPDE 223


>ref|XP_002512131.1| conserved hypothetical protein [Ricinus communis]
           gi|223549311|gb|EEF50800.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 232

 Score =  273 bits (698), Expect = 4e-71
 Identities = 147/234 (62%), Positives = 177/234 (75%), Gaps = 7/234 (2%)
 Frame = +1

Query: 37  MAISGDLRVCATMASVRRY-----FPPS--KVGFNSFQTGGSSVSEVMHKWPRIELDGHS 195
           MAISGDLRV AT+ S  ++     FP S  KV F  F  GGS  S  +HKWP I +D   
Sbjct: 1   MAISGDLRVSATLTSYHKHPFRSSFPSSNSKVEFTGFPGGGSVTSPNVHKWPSIMVDRCK 60

Query: 196 MRCESQRSWSFGIIGDNQISAKPVNEETEGLLLSAINMSFLERLDLAWKILFPPPATVRN 375
           M   S+R    GI GD Q+S+  + EE E  LL+AINMSF ERL+LAWKI+FP PA  ++
Sbjct: 61  MHDHSRRF--SGITGDYQLSSTSIGEEAESFLLNAINMSFFERLNLAWKIIFPSPARRKS 118

Query: 376 SNARIAKQRLKMILFSDRCAVSDEAKQKIVSNVVGALSDFVEIESRDKVHLSVSTDPDLG 555
           SNAR+AKQRLKMILFSDRCAVSDEAK+KIVSN+V ALS+FV IES+DKV LSV+ D DLG
Sbjct: 119 SNARVAKQRLKMILFSDRCAVSDEAKRKIVSNIVHALSEFVVIESQDKVQLSVTADSDLG 178

Query: 556 TIYSVTVPVRRVKSKYQVEDESGMITNVEYKDTGDSSGTVDVKFDFFVPTE*SQ 717
           T+YSVTVPVRRV+ +YQ  +E G ITN+EYKDTG+SSG+VDV+FDFF+P E S+
Sbjct: 179 TVYSVTVPVRRVRPEYQDAEEIGSITNIEYKDTGESSGSVDVRFDFFIPDERSR 232


>ref|XP_002312270.1| predicted protein [Populus trichocarpa] gi|222852090|gb|EEE89637.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score =  273 bits (698), Expect = 4e-71
 Identities = 145/230 (63%), Positives = 176/230 (76%), Gaps = 6/230 (2%)
 Frame = +1

Query: 37  MAISGDLRVCATMASVRRYF----PPS--KVGFNSFQTGGSSVSEVMHKWPRIELDGHSM 198
           MAISGDLRV AT+AS  ++     PPS  KV F  F  GG   S+ M KWP  ++ GH  
Sbjct: 1   MAISGDLRVSATLASYSKHLLCSLPPSNSKVEFLGFLNGGCGTSQNMLKWPGFKIHGHFK 60

Query: 199 RCESQRSWSFGIIGDNQISAKPVNEETEGLLLSAINMSFLERLDLAWKILFPPPATVRNS 378
           R       S GI  D Q+S+  +N+E E LLLSA+NMSF ERL+LAW+I+FP P+  ++S
Sbjct: 61  R-------SAGIAEDYQLSSTAINQEAESLLLSAVNMSFFERLNLAWRIIFPSPSQRKSS 113

Query: 379 NARIAKQRLKMILFSDRCAVSDEAKQKIVSNVVGALSDFVEIESRDKVHLSVSTDPDLGT 558
           NARIAKQRLKMILFSDRCAVSDEAK+KIV+NVV ALS+FVEIES+DKV LSV+TD DLGT
Sbjct: 114 NARIAKQRLKMILFSDRCAVSDEAKRKIVNNVVHALSEFVEIESQDKVQLSVTTDTDLGT 173

Query: 559 IYSVTVPVRRVKSKYQVEDESGMITNVEYKDTGDSSGTVDVKFDFFVPTE 708
           +YSVTVPV RVK  YQ E+ESG ITN+EYKDTG++S +VDV+FDF++P E
Sbjct: 174 VYSVTVPVHRVKPGYQEEEESGSITNIEYKDTGETSASVDVRFDFYIPDE 223


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