BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006485
         (1560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...   120   8e-25
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   120   1e-24
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   119   2e-24
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-23
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   114   9e-23

>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
            gi|223551309|gb|EEF52795.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 406

 Score =  120 bits (302), Expect = 8e-25
 Identities = 113/440 (25%), Positives = 179/440 (40%), Gaps = 41/440 (9%)
 Frame = -1

Query: 1422 SRWSQIPXXXXXXXXXXXXXXXL-VRFSCVCRPWRSHATPLLLPNFNLIPWLIVPYGNYT 1246
            S WS++P                 +    VC+ W S            +PWL++PY    
Sbjct: 2    SNWSELPQELLQTITQKQSNYVDYISTRAVCKSWWSAIPKKPHDLLCQLPWLLLPYHKNN 61

Query: 1245 CQKSTNIWDKTLGFFNIQDGKTYKIDTPQLADRRICGSCSGGWLVTVHENGEIQVYHPFS 1066
                        GF+N+ DGKTY ++ P+  ++R CGS S GWLV V +   I + +P +
Sbjct: 62   PNHR--------GFYNLADGKTYHLELPETIEKRCCGS-SHGWLVMVEDTPSIFLLNPLT 112

Query: 1065 KKVIELPPVTKLPGVNGCFIDRNELRYVVPNRPHFSYRVLEMATTTMSSHEIRERYIYKA 886
            K  IELP ++  P             Y      + + R +     T +   IRE YI KA
Sbjct: 113  KARIELPSLSTFP-------------YFPTEVVYENSRNINEYFNTKAKLRIRETYIRKA 159

Query: 885  IMS--PSTGTVMIIQ-----GRFRTLALCRVGRVKKWYSVKGDIEG-RYNDIAIYNREFY 730
            I+S  PSTG   ++           +A C+ G    W++++   +   Y D+  +  +FY
Sbjct: 160  IVSEDPSTGNFAVMAIYKTINSTENIAFCKSGDAT-WFTIQETSQKIHYQDVMFHRGKFY 218

Query: 729  AVNDFGQVFVVSSVDSGRPVIKLVISGPYG--FFYCKSYLVECKGELLLLRRV-----CD 571
            AV+D G+V +  +  +   VI++    P      Y + YL     +L+L  R        
Sbjct: 219  AVDDKGRVSICITDINPPSVIQVADPPPVPPLMGYKQWYLASLDEDLILAGRFRKYRGSG 278

Query: 570  NNHVTAWFMINELDFSGPRWVEVKQLNRGYVDDVGQDCAMFVGYNDSFCISTSSFTGYEE 391
              + T  FM+ +LD S   W+E+  L          D   F+G+N    IST ++  Y  
Sbjct: 279  YEYQTHKFMVYKLDASSSNWLELDGLG---------DMLSFLGWNCFHSISTQNYRNYSG 329

Query: 390  HSVYFTGDILKRDLFASQLQETIYGDLGVFNLKNDVIKRFFSKSFT-------------- 253
            + +YFT D   + +  S      + D G+FNL +  ++R    S+               
Sbjct: 330  NCIYFTDD---KFIVGSDFPWEGH-DYGIFNLDDKSVQRLGLPSYPIKLPILPFIYGYER 385

Query: 252  -----------PSPIWFTTN 226
                       P PIW T N
Sbjct: 386  SLKRDRSSFILPPPIWVTIN 405


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  120 bits (301), Expect = 1e-24
 Identities = 117/426 (27%), Positives = 182/426 (42%), Gaps = 29/426 (6%)
 Frame = -1

Query: 1416 WSQI-PXXXXXXXXXXXXXXXLVRFSCVCRPWRSHA--TPLLLPNFNLIPWLIVPYG--N 1252
            WSQ+ P                VRF  VC  WR+    TP  LP    +PWL++P    +
Sbjct: 4    WSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPT--QLPWLMLPQSQPH 61

Query: 1251 YTCQKSTNIWDKTLGFFNIQDGKTYKIDTPQLADRRICGSCSGGWLVTVHENGEIQVYHP 1072
            +T +           FF++   K + +  P+ + RR     S GWL+ + E  EI + +P
Sbjct: 62   HTHRP----------FFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNP 111

Query: 1071 FSKKVIELPPVTKLPGV---NGCFIDRNELRYVVPNRPHFSYRVLEMATTTMSSHEIRER 901
             ++  + LPP++  P V   N   + R            ++ R       T S  ++R+ 
Sbjct: 112  LTRSKVHLPPLSTFPNVVRFNFADVGR-----------EYALRTSSGDVYTRSLKKMRDS 160

Query: 900  YIYKAIM--SPSTGT---VMIIQGRFRTLALCRVGRVKKWYSVKGDIEGRYNDIAIYNRE 736
            +I K I+  SP+ G+    ++I  +   LALCR  +    ++   D +    D+  +   
Sbjct: 161  FIKKTILSSSPANGSDFIAVVILNQTGDLALCR--KSDDSWTFLEDAQSYAEDVIFHRGL 218

Query: 735  FYAVNDFGQVFVVSSVDSGRPVIKLVISGPYGFFYCKSYLVECKGELLLLRRVCDNN--- 565
            FYAVN +G +  V  V    P +  +I  P  F     YLVE   ELLL+ R  D     
Sbjct: 219  FYAVNKYGSI-AVCDVSGSSPRVS-IIEMPQQFGGDLQYLVESGEELLLVTRYLDLTYDV 276

Query: 564  --------HVTAWFMINELDFSGPRWVEVKQLNRGYVDDVGQDCAMFVGYNDSFCISTSS 409
                    + T  F +  LD   PRW  V  L          D A+F+G N S  +S+  
Sbjct: 277  EPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLG---------DRALFLGENLSLSLSSVD 327

Query: 408  FTGYEEHSVYFTGDILKRDLFASQLQETIYG--DLGVFNLKNDVIKRFFSKSFT---PSP 244
            F G + + +Y+T D      ++    + I G  DLG+FNL++  I+      F    P P
Sbjct: 328  FPGCKGNCIYYTDD------YSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPP 381

Query: 243  IWFTTN 226
            +W T N
Sbjct: 382  LWVTPN 387


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  119 bits (299), Expect = 2e-24
 Identities = 117/426 (27%), Positives = 182/426 (42%), Gaps = 29/426 (6%)
 Frame = -1

Query: 1416 WSQI-PXXXXXXXXXXXXXXXLVRFSCVCRPWRSHA--TPLLLPNFNLIPWLIVPYG--N 1252
            WSQ+ P                VRF  VC  WR+    TP  LP    +PWL++P    +
Sbjct: 4    WSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPT--QLPWLMLPQSQPH 61

Query: 1251 YTCQKSTNIWDKTLGFFNIQDGKTYKIDTPQLADRRICGSCSGGWLVTVHENGEIQVYHP 1072
            +T +           FF++   K + +  P+ + RR     S GWL+ + E  EI + +P
Sbjct: 62   HTHRP----------FFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNP 111

Query: 1071 FSKKVIELPPVTKLPGV---NGCFIDRNELRYVVPNRPHFSYRVLEMATTTMSSHEIRER 901
             ++  + LPP++  P V   N   + R            ++ R       T S  ++R+ 
Sbjct: 112  LTRSKVHLPPLSTFPNVVRFNFADVGR-----------EYALRTSSGDVYTRSLKKMRDS 160

Query: 900  YIYKAIM--SPSTGT---VMIIQGRFRTLALCRVGRVKKWYSVKGDIEGRYNDIAIYNRE 736
            +I K I+  SP+ G+    ++I  +   LALCR  +    ++   D +    D+  +   
Sbjct: 161  FIKKTILSSSPANGSDFIAVVILNQTGDLALCR--KSDDSWTFLEDAQSYSEDVIFHRGL 218

Query: 735  FYAVNDFGQVFVVSSVDSGRPVIKLVISGPYGFFYCKSYLVECKGELLLLRRVCDNN--- 565
            FYAVN +G +  V  V    P +  +I  P  F     YLVE   ELLL+ R  D     
Sbjct: 219  FYAVNKYGSI-AVCDVSGSSPRVS-IIEMPQQFGGDLQYLVESGEELLLVTRYLDLTYDV 276

Query: 564  --------HVTAWFMINELDFSGPRWVEVKQLNRGYVDDVGQDCAMFVGYNDSFCISTSS 409
                    + T  F +  LD   PRW  V  L          D A+F+G N S  +S+  
Sbjct: 277  EXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLG---------DRALFLGENLSLSLSSVD 327

Query: 408  FTGYEEHSVYFTGDILKRDLFASQLQETIYG--DLGVFNLKNDVIKRFFSKSFT---PSP 244
            F G + + +Y+T D      ++    + I G  DLG+FNL++  I+      F    P P
Sbjct: 328  FPGCKGNCIYYTDD------YSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPP 381

Query: 243  IWFTTN 226
            +W T N
Sbjct: 382  LWVTPN 387


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  117 bits (292), Expect = 1e-23
 Identities = 113/426 (26%), Positives = 180/426 (42%), Gaps = 25/426 (5%)
 Frame = -1

Query: 1428 MASRWSQIPXXXXXXXXXXXXXXXL-VRFSCVCRPWRSHA--TPLLLPNFNLIPWLIVPY 1258
            MA  W+Q+P                 + F  VC  W+S    TP  LP    +PWL++P 
Sbjct: 1    MAVDWTQLPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHLPP--QLPWLLLP- 57

Query: 1257 GNYTCQKSTNIWDKTLGFFNIQDGKTYKIDTPQLADRRI-CGSCSGGWLVTVHENGEIQV 1081
                  +S +       FFN+   K + ++ P+ + R+  CGS S GWL+ + ++  I V
Sbjct: 58   ------QSQSNQSSYRAFFNLSTYKFHSLNLPEASHRKKHCGS-SHGWLIILDDSPSILV 110

Query: 1080 YHPFSKKVIELPPVTKLPGVNGCFIDRNELRYVVPNRPHFSYRVLEMATTTMSSHEIRER 901
             +P +++ I LP ++  P V           Y++ N         +    T S  ++R+ 
Sbjct: 111  INPLTRRKIHLPAISSFPNVVSFDYANVGREYLLVNP--------QGERNTASLRQMRDG 162

Query: 900  YIYKAIMSPST-------GTVMIIQGRFRTLALCRVGRVKKWYSVKGDIEGRYNDIAIYN 742
            +I K +MS S           M I      LA C+ G   + +++  +      D+  +N
Sbjct: 163  FIKKVVMSSSPLEKKGDFFVAMAILCSTGDLAYCKNG--DECWNIVENSRSFSEDVIYFN 220

Query: 741  REFYAVNDFGQVFVVSSVDSGRPVIKLVISGPYGFFYCKSYLVECKGELLLLRRVCDNN- 565
              FYAVN  GQ+ VV  V+   P +   I  P        YLV     LLL+ R  D + 
Sbjct: 221  GLFYAVNKAGQI-VVCDVNGNSPKVSF-IETPRQIGGDMQYLVSSGDGLLLVTRYLDLDV 278

Query: 564  ------HVTAWFMINELDFSGPRWVEVKQLNRGYVDDVGQDCAMFVGYNDSFCISTSSFT 403
                  + TA F + +LD +GPRW  V  L          D  +F+G N S  +S S  +
Sbjct: 279  EFDIFIYKTARFEVFKLDLNGPRWERVTSLG---------DMMLFIGENSSLALSASGLS 329

Query: 402  GYEEHSVYFTGDILKRDLFASQLQETIYGDLGVFNLKNDVI-------KRFFSKSFTPSP 244
            G     +Y+T D    + +   + E    DLG+F L +  I       +  +S+   P P
Sbjct: 330  GCMGDCIYYTDDYSANN-YDGHIGE---HDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPP 385

Query: 243  IWFTTN 226
            +W + N
Sbjct: 386  LWISPN 391


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  114 bits (284), Expect = 9e-23
 Identities = 115/435 (26%), Positives = 187/435 (42%), Gaps = 34/435 (7%)
 Frame = -1

Query: 1428 MASRWSQIPXXXXXXXXXXXXXXXLVRFS-CVCRPWRSHA--TPLLLPNFNLIPWLIVPY 1258
            M   WSQ+P                  +S  VC  WR     TP  LP    +PWL++P 
Sbjct: 1    MIMDWSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLPP--QLPWLMLPQ 58

Query: 1257 GNYTCQKSTNIWDKTLGFFNIQDGKTYKIDTPQLADR-RICGSCSGGWLVTVHENGEIQV 1081
                  +S         FF++   K + ++ P+++ R R CGS S GWL+ + +   I +
Sbjct: 59   SQSQSNQSRR------AFFSLSTNKFHFLNLPEVSYRKRHCGS-SHGWLMILDDTPTILL 111

Query: 1080 YHPFSKKVIELPPVTKLPGV---NGCFIDRNELRYVVPNRPHFSYRVLEMATTTMSSHEI 910
             +P ++  + LPP++  P V   N   I R            ++ R L     T+S  ++
Sbjct: 112  INPLTRAKLSLPPLSSFPNVISFNYSDIGR-----------EYALRNLLGERVTVSLRQM 160

Query: 909  RERYIYKAIMSPS-----TGTVMIIQGRFRTLALCRVGRVKKWYSVKGDIEGRYNDIAIY 745
            R+ +I K ++S S        V+ I  +   LA CR G   K +S+  +      D+   
Sbjct: 161  RDSFIRKVVLSSSPLKDNNFVVIAILNQTDDLAYCRNG--DKSWSLVENARSFCEDVIFV 218

Query: 744  NREFYAVNDFGQVFVVSSVDSGRPVIKLVISGPYGFFYCKSYLVECKGELLLLRRVCDNN 565
            N  FYAVN  GQ+ V+  + S  P +   +  P        YLV    ELLL+ R  D  
Sbjct: 219  NGMFYAVNKAGQI-VICDISSDSPRVSF-METPRQAGGDMQYLVNSGDELLLVTRYLDLE 276

Query: 564  HV-------------TAWFMINELDFSGPRWVEVKQLNRGYVDDVGQDCAMFVGYNDSFC 424
            +              T  F +  LD++GP+W+ +  L          D A+F+G N S  
Sbjct: 277  YEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLG---------DKALFIGENSSLS 327

Query: 423  ISTSSFTGYEEHSVYFTGDILKRDLFASQLQETIYG--DLGVFNLKNDVIKRF--FSKSF 256
            +S + F+G   + +Y+T D L  +       +  +G  DLG+F L ++ I+    + ++F
Sbjct: 328  LSATDFSGCMGNCIYYTDDYLDAN------YDGHFGDHDLGIFKLCDETIEPLPCYPRNF 381

Query: 255  T-----PSPIWFTTN 226
            T       P+W + N
Sbjct: 382  TSPLQWSPPLWVSPN 396