BLASTX nr result

ID: Coptis21_contig00006461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006461
         (1270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276816.1| PREDICTED: probable membrane-associated 30 k...   414   e-113
ref|NP_001045073.1| Os01g0895100 [Oryza sativa Japonica Group] g...   413   e-113
gb|EEC71949.1| hypothetical protein OsI_04768 [Oryza sativa Indi...   413   e-113
gb|ACG32836.1| membrane-associated 30 kDa protein [Zea mays] gi|...   407   e-111
ref|NP_001130281.1| uncharacterized protein LOC100191375 [Zea ma...   406   e-111

>ref|XP_002276816.1| PREDICTED: probable membrane-associated 30 kDa protein, chloroplastic
            [Vitis vinifera] gi|297735245|emb|CBI17607.3| unnamed
            protein product [Vitis vinifera]
          Length = 324

 Score =  414 bits (1064), Expect = e-113
 Identities = 229/331 (69%), Positives = 263/331 (79%), Gaps = 14/331 (4%)
 Frame = +2

Query: 128  MAVRAPPVTGLCLAXXXXXXXXXNRIVFLRKSFLNGGV-------LKVSRSPLPPNRFRC 286
            MA + P   GL LA          R + L+ +F   GV       ++++RS    + +RC
Sbjct: 1    MATKVPIGAGLSLASPPCASNV--RSLVLKSAFFGHGVGALKVRGIRIARS----STYRC 54

Query: 287  NG-------VRMNLFDRFARVVKSYANAIISTFEDPEKILEQSVLEMNDDLTKMRQATAQ 445
            NG        +MNLFDRFARVVKSYANA++S+FEDPEKILEQ+VLEMNDDLTKMRQATAQ
Sbjct: 55   NGHGGGALGTQMNLFDRFARVVKSYANAVLSSFEDPEKILEQTVLEMNDDLTKMRQATAQ 114

Query: 446  VMASQKRLENKCKSAQQASEDWYRRAQLALEKGDENLAREALKRRKSYADNASSMKAQLD 625
            V+ASQK+LEN+ K+AQQASEDWY+RAQLAL KGDE+LAREALKRRKSYADNAS++KAQLD
Sbjct: 115  VLASQKQLENRYKAAQQASEDWYKRAQLALGKGDEDLAREALKRRKSYADNASALKAQLD 174

Query: 626  QQKTVVDNLVSNTRLLESKIQEARSKKDXXXXXXXXXXXXXXVNEMLGTVNTSSALSAFD 805
            QQKTVV+NLVSNTRLLESKIQEA+SKKD              V+EMLG VNTSSALSAF+
Sbjct: 175  QQKTVVENLVSNTRLLESKIQEAKSKKDTLKARAQSAKTASKVSEMLGNVNTSSALSAFE 234

Query: 806  KMEEKVLAMESQAEALTQLATDDLEGKFAMLETSSVDDDLVNLKKELSGNSKKGELPPGR 985
            KMEEKVLAMESQAEAL QL TDDLEGKFA+LE+SSVDDDL +LKKELSG+SKKGELPPGR
Sbjct: 235  KMEEKVLAMESQAEALNQLTTDDLEGKFALLESSSVDDDLASLKKELSGSSKKGELPPGR 294

Query: 986  TTVSSTNTPFPFADTEIDKELNELRRKVKEF 1078
            T V+S NT FPF D+EI+KELNELRRK  EF
Sbjct: 295  TAVAS-NTAFPFRDSEIEKELNELRRKASEF 324


>ref|NP_001045073.1| Os01g0895100 [Oryza sativa Japonica Group]
            gi|44888076|sp|Q8S0J7.1|IM30_ORYSJ RecName: Full=Probable
            membrane-associated 30 kDa protein, chloroplastic; Flags:
            Precursor gi|20161290|dbj|BAB90216.1| putative
            membrane-associated 30 kDa protein, chloroplast precursor
            [Oryza sativa Japonica Group] gi|21952843|dbj|BAC06258.1|
            putative chloroplast membrane-associated 30 kD protein
            [Oryza sativa Japonica Group]
            gi|113534604|dbj|BAF06987.1| Os01g0895100 [Oryza sativa
            Japonica Group] gi|125572953|gb|EAZ14468.1| hypothetical
            protein OsJ_04390 [Oryza sativa Japonica Group]
            gi|215695356|dbj|BAG90547.1| unnamed protein product
            [Oryza sativa Japonica Group]
            gi|215765055|dbj|BAG86752.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 317

 Score =  413 bits (1062), Expect = e-113
 Identities = 223/321 (69%), Positives = 258/321 (80%), Gaps = 4/321 (1%)
 Frame = +2

Query: 128  MAVRAPPVTGLCLAXXXXXXXXXNRIVFLRKSFLNGGV----LKVSRSPLPPNRFRCNGV 295
            M +RAPP T L LA          R   LR SFLNG V    ++V +S +  NRF+CNG+
Sbjct: 1    MEIRAPP-TSLRLAPPPPASASFRRTA-LRTSFLNGSVSLRLIQVRQSNV--NRFKCNGI 56

Query: 296  RMNLFDRFARVVKSYANAIISTFEDPEKILEQSVLEMNDDLTKMRQATAQVMASQKRLEN 475
            R NL DRF+RVVKSYANA++S+FEDPEKIL+Q+VLEMNDDLTKMRQATAQV+ASQKRLEN
Sbjct: 57   RSNLLDRFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLEN 116

Query: 476  KCKSAQQASEDWYRRAQLALEKGDENLAREALKRRKSYADNASSMKAQLDQQKTVVDNLV 655
            K K+A+QAS+DWYRRAQLAL+KGDE+LAREALKRRKSYADNASS+KAQLDQQK VV+NLV
Sbjct: 117  KYKAAEQASDDWYRRAQLALQKGDEDLAREALKRRKSYADNASSLKAQLDQQKGVVENLV 176

Query: 656  SNTRLLESKIQEARSKKDXXXXXXXXXXXXXXVNEMLGTVNTSSALSAFDKMEEKVLAME 835
            SNTR+LESKI EA+ KKD              V+EMLG VNTS ALSAF+KMEEKV+AME
Sbjct: 177  SNTRVLESKIAEAKQKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMAME 236

Query: 836  SQAEALTQLATDDLEGKFAMLETSSVDDDLVNLKKELSGNSKKGELPPGRTTVSSTNTPF 1015
            SQAEAL QLATDDLEGKFA+LETSSVDDDL  +KKE+SG+S KGELPPGRT VS++    
Sbjct: 237  SQAEALGQLATDDLEGKFALLETSSVDDDLAQMKKEISGSSSKGELPPGRTAVSNSGAAR 296

Query: 1016 PFADTEIDKELNELRRKVKEF 1078
            PF D EI+ ELNELR+K  E+
Sbjct: 297  PFRDIEIENELNELRKKANEY 317


>gb|EEC71949.1| hypothetical protein OsI_04768 [Oryza sativa Indica Group]
          Length = 317

 Score =  413 bits (1061), Expect = e-113
 Identities = 223/321 (69%), Positives = 258/321 (80%), Gaps = 4/321 (1%)
 Frame = +2

Query: 128  MAVRAPPVTGLCLAXXXXXXXXXNRIVFLRKSFLNGGV----LKVSRSPLPPNRFRCNGV 295
            M +RAPP T L LA          R   LR SFLNG V    ++V +S +  NRF+CNG+
Sbjct: 1    MEIRAPP-TSLRLAPPPPASASFRRTA-LRTSFLNGSVSLRLIQVRQSNV--NRFKCNGI 56

Query: 296  RMNLFDRFARVVKSYANAIISTFEDPEKILEQSVLEMNDDLTKMRQATAQVMASQKRLEN 475
            R NL DRF+RVVKSYANA++S+FEDPEKIL+Q+VLEMNDDLTKMRQATAQV+ASQKRLEN
Sbjct: 57   RSNLLDRFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLEN 116

Query: 476  KCKSAQQASEDWYRRAQLALEKGDENLAREALKRRKSYADNASSMKAQLDQQKTVVDNLV 655
            K KSA+QAS+DWYRRAQLAL+KGDE+LAREALKRRKSYADNASS+KAQLDQQK VV+NLV
Sbjct: 117  KYKSAEQASDDWYRRAQLALQKGDEDLAREALKRRKSYADNASSLKAQLDQQKGVVENLV 176

Query: 656  SNTRLLESKIQEARSKKDXXXXXXXXXXXXXXVNEMLGTVNTSSALSAFDKMEEKVLAME 835
            SNT++LESKI EA+ KKD              V+EMLG VNTS ALSAF+KMEEKV+AME
Sbjct: 177  SNTQVLESKIAEAKQKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMAME 236

Query: 836  SQAEALTQLATDDLEGKFAMLETSSVDDDLVNLKKELSGNSKKGELPPGRTTVSSTNTPF 1015
            SQAEAL QLATDDLEGKFA+LETSSVDDDL  +KKE+SG+S KGELPPGRT VS++    
Sbjct: 237  SQAEALGQLATDDLEGKFALLETSSVDDDLAQMKKEISGSSSKGELPPGRTAVSNSGAAR 296

Query: 1016 PFADTEIDKELNELRRKVKEF 1078
            PF D EI+ ELNELR+K  E+
Sbjct: 297  PFLDIEIENELNELRKKANEY 317


>gb|ACG32836.1| membrane-associated 30 kDa protein [Zea mays]
            gi|219884263|gb|ACL52506.1| unknown [Zea mays]
          Length = 316

 Score =  407 bits (1045), Expect = e-111
 Identities = 223/321 (69%), Positives = 256/321 (79%), Gaps = 4/321 (1%)
 Frame = +2

Query: 128  MAVRAPPVTGLCLAXXXXXXXXXNRIVFLRKSFLNGGV----LKVSRSPLPPNRFRCNGV 295
            M +RAPP T L LA          R   LR SFL G V    ++V +S +  NRF+CN +
Sbjct: 1    MEIRAPP-TSLRLAPPPASASF--RRTPLRTSFLRGSVSLKVVQVRQSNV--NRFKCNSI 55

Query: 296  RMNLFDRFARVVKSYANAIISTFEDPEKILEQSVLEMNDDLTKMRQATAQVMASQKRLEN 475
            R NLFDR  RVV+SYANA++S+FEDPEKIL+Q+VLEMNDDLTKMRQATAQV+ASQKRLEN
Sbjct: 56   RSNLFDRLTRVVRSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLEN 115

Query: 476  KCKSAQQASEDWYRRAQLALEKGDENLAREALKRRKSYADNASSMKAQLDQQKTVVDNLV 655
            K K+A+QAS DWYRRAQLAL+KGDE+LAREALKRRKSYADNASS+++QLDQQK VV+NL+
Sbjct: 116  KSKAAEQASADWYRRAQLALQKGDEDLAREALKRRKSYADNASSLRSQLDQQKGVVENLI 175

Query: 656  SNTRLLESKIQEARSKKDXXXXXXXXXXXXXXVNEMLGTVNTSSALSAFDKMEEKVLAME 835
            SNTRLLESKI EA+ KKD              V+EMLG VNTSSALSAF+KMEEKV+AME
Sbjct: 176  SNTRLLESKISEAKQKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAME 235

Query: 836  SQAEALTQLATDDLEGKFAMLETSSVDDDLVNLKKELSGNSKKGELPPGRTTVSSTNTPF 1015
            SQAEAL QLATDDLEGKFA+LETSSVDDDL  LKKELSG+S KGELPPGRT VS++    
Sbjct: 236  SQAEALGQLATDDLEGKFALLETSSVDDDLSQLKKELSGSSLKGELPPGRTAVSNSGAGR 295

Query: 1016 PFADTEIDKELNELRRKVKEF 1078
            PF D EI+ ELNELRRK KE+
Sbjct: 296  PFPDLEIESELNELRRKAKEY 316


>ref|NP_001130281.1| uncharacterized protein LOC100191375 [Zea mays]
            gi|194688738|gb|ACF78453.1| unknown [Zea mays]
            gi|194701220|gb|ACF84694.1| unknown [Zea mays]
            gi|414879244|tpg|DAA56375.1| TPA: IM30 protein-like
            protein [Zea mays]
          Length = 316

 Score =  406 bits (1043), Expect = e-111
 Identities = 223/321 (69%), Positives = 256/321 (79%), Gaps = 4/321 (1%)
 Frame = +2

Query: 128  MAVRAPPVTGLCLAXXXXXXXXXNRIVFLRKSFLNGGV----LKVSRSPLPPNRFRCNGV 295
            M +RAPP T L LA          R   LR SFL G V    ++V +S +  NRF+CN +
Sbjct: 1    MEIRAPP-TSLRLAPPPAAASF--RRTPLRTSFLRGSVSLKVVQVRQSNV--NRFKCNSI 55

Query: 296  RMNLFDRFARVVKSYANAIISTFEDPEKILEQSVLEMNDDLTKMRQATAQVMASQKRLEN 475
            R NLFDR  RVV+SYANA++S+FEDPEKIL+Q+VLEMNDDLTKMRQATAQV+ASQKRLEN
Sbjct: 56   RSNLFDRLTRVVRSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLEN 115

Query: 476  KCKSAQQASEDWYRRAQLALEKGDENLAREALKRRKSYADNASSMKAQLDQQKTVVDNLV 655
            K K+A+QAS DWYRRAQLAL+KGDE+LAREALKRRKSYADNASS+++QLDQQK VV+NL+
Sbjct: 116  KYKAAEQASADWYRRAQLALQKGDEDLAREALKRRKSYADNASSLRSQLDQQKGVVENLI 175

Query: 656  SNTRLLESKIQEARSKKDXXXXXXXXXXXXXXVNEMLGTVNTSSALSAFDKMEEKVLAME 835
            SNTRLLESKI EA+ KKD              V+EMLG VNTSSALSAF+KMEEKV+AME
Sbjct: 176  SNTRLLESKIAEAKQKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAME 235

Query: 836  SQAEALTQLATDDLEGKFAMLETSSVDDDLVNLKKELSGNSKKGELPPGRTTVSSTNTPF 1015
            SQAEAL QLATDDLEGKFA+LETSSVDDDL  LKKELSG+S KGELPPGRT VS++    
Sbjct: 236  SQAEALGQLATDDLEGKFALLETSSVDDDLSQLKKELSGSSLKGELPPGRTAVSNSGAGR 295

Query: 1016 PFADTEIDKELNELRRKVKEF 1078
            PF D EI+ ELNELRRK KE+
Sbjct: 296  PFPDLEIESELNELRRKAKEY 316


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