BLASTX nr result

ID: Coptis21_contig00006455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006455
         (1511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22662.3| unnamed protein product [Vitis vinifera]              252   2e-64
ref|XP_002513657.1| conserved hypothetical protein [Ricinus comm...   229   2e-57
ref|XP_002273424.1| PREDICTED: uncharacterized protein LOC100250...   226   9e-57
ref|XP_002305242.1| predicted protein [Populus trichocarpa] gi|2...   209   2e-51
ref|XP_002327586.1| predicted protein [Populus trichocarpa] gi|2...   207   4e-51

>emb|CBI22662.3| unnamed protein product [Vitis vinifera]
          Length = 250

 Score =  252 bits (644), Expect = 2e-64
 Identities = 165/324 (50%), Positives = 188/324 (58%), Gaps = 1/324 (0%)
 Frame = -1

Query: 1265 MGKCKGCGKLGRMTPTDISVSSYHFALLLSPVVSVWDCIVRKMRYSFRPEWV*GWTG*H* 1086
            MGKCKGCGKLGRM   D  VS+YH ALLL P+VSVWDC VRKMR                
Sbjct: 1    MGKCKGCGKLGRMVSKDGFVSAYHSALLLCPIVSVWDCAVRKMR---------------- 44

Query: 1085 LDPSALPVLDKGDFSFYYQRK*L*RNLYKF*RSFFLKVANRIDFLEKSIVGMDTIACIQA 906
                                       Y F          R ++LEK +V MD  AC + 
Sbjct: 45   ---------------------------YSF----------RPEWLEKLVVVMDNTACTKV 67

Query: 905  PP-VRKGKKKQAKDEVDRLKQAEKKKRRLEKALATSAAIRSELXXXXXXXXXXXQRLDEE 729
            P  VRK KKKQ KDE+DR KQAEKKKRRLEKALATSAAI SEL           QRLDEE
Sbjct: 68   PSAVRKVKKKQVKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEE 127

Query: 728  GAAIAEAVAMHVLLGEDSDESCKILLQQDEGFNPWNRASNIGLFMGGRKAGPGNQGYTRY 549
            GAAIAEAVA+HVLLGEDSD+S K+ L++DEGFNPW+ A++I L MGGR   P  QG T+ 
Sbjct: 128  GAAIAEAVALHVLLGEDSDDSRKMALKKDEGFNPWDCATSIDLLMGGRSGIP-CQGPTKC 186

Query: 548  SLEGLGRVSDAYGGMACKWNDWGLGSWSLSQDIFGKERHAPYFEERIRGTTEISAGLIAA 369
            SL  +  VS+ Y                 S D+     H PYFEE    TTEISAGL+AA
Sbjct: 187  SLNEIEWVSNVYE----------------SGDL-----HPPYFEEGSWETTEISAGLLAA 225

Query: 368  QAVSSLQIVEDAHAESILINRMLR 297
            QAVSSLQI EDA  ++I+ N MLR
Sbjct: 226  QAVSSLQIAEDAPVDTIVFNGMLR 249


>ref|XP_002513657.1| conserved hypothetical protein [Ricinus communis]
           gi|223547565|gb|EEF49060.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 256

 Score =  229 bits (583), Expect = 2e-57
 Identities = 129/215 (60%), Positives = 154/215 (71%), Gaps = 1/215 (0%)
 Frame = -1

Query: 941 IVGMDTIACIQAPPV-RKGKKKQAKDEVDRLKQAEKKKRRLEKALATSAAIRSELXXXXX 765
           +V MDTIAC +  PV RK KKKQ K E+DRLKQAEKKKRRLEKALATSAAI SEL     
Sbjct: 46  VVSMDTIACNKVQPVMRKVKKKQVKGELDRLKQAEKKKRRLEKALATSAAIISELEKKKQ 105

Query: 764 XXXXXXQRLDEEGAAIAEAVAMHVLLGEDSDESCKILLQQDEGFNPWNRASNIGLFMGGR 585
                 QRLDEEGAAIAEAVA+ VLLGEDSD+ CK++L ++EGFNPW+  SNI LFMG  
Sbjct: 106 KKKEEQQRLDEEGAAIAEAVALQVLLGEDSDDPCKLVLNKEEGFNPWDCGSNINLFMGEE 165

Query: 584 KAGPGNQGYTRYSLEGLGRVSDAYGGMACKWNDWGLGSWSLSQDIFGKERHAPYFEERIR 405
           +A   +Q  +R+S E +G +S+A G   C+W+D    SWS S   FG++ H PYFE+   
Sbjct: 166 RACLPHQDGSRHSHERIGWISNACGA-GCEWSDADNSSWSFSYGSFGRDAHTPYFEDGSW 224

Query: 404 GTTEISAGLIAAQAVSSLQIVEDAHAESILINRML 300
           GT    AGLIAAQAVSSLQI EDAH ++I+ N ML
Sbjct: 225 GT----AGLIAAQAVSSLQIAEDAHIDTIIFNGML 255



 Score = 82.4 bits (202), Expect = 3e-13
 Identities = 36/44 (81%), Positives = 40/44 (90%)
 Frame = -1

Query: 1265 MGKCKGCGKLGRMTPTDISVSSYHFALLLSPVVSVWDCIVRKMR 1134
            MGKCKGCGKLGRM P   SV++YHF+LLLSPVVSVWDC+VRKMR
Sbjct: 1    MGKCKGCGKLGRMVPRGESVNAYHFSLLLSPVVSVWDCVVRKMR 44


>ref|XP_002273424.1| PREDICTED: uncharacterized protein LOC100250830 isoform 3 [Vitis
           vinifera] gi|225464571|ref|XP_002273394.1| PREDICTED:
           uncharacterized protein LOC100250830 isoform 2 [Vitis
           vinifera] gi|225464573|ref|XP_002273368.1| PREDICTED:
           uncharacterized protein LOC100250830 isoform 1 [Vitis
           vinifera] gi|147765806|emb|CAN66701.1| hypothetical
           protein VITISV_002069 [Vitis vinifera]
          Length = 212

 Score =  226 bits (577), Expect = 9e-57
 Identities = 131/213 (61%), Positives = 152/213 (71%), Gaps = 1/213 (0%)
 Frame = -1

Query: 932 MDTIACIQAPP-VRKGKKKQAKDEVDRLKQAEKKKRRLEKALATSAAIRSELXXXXXXXX 756
           MD  AC + P  VRK KKKQ KDE+DR KQAEKKKRRLEKALATSAAI SEL        
Sbjct: 1   MDNTACTKVPSAVRKVKKKQVKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQKKK 60

Query: 755 XXXQRLDEEGAAIAEAVAMHVLLGEDSDESCKILLQQDEGFNPWNRASNIGLFMGGRKAG 576
              QRLDEEGAAIAEAVA+HVLLGEDSD+S K+ L++DEGFNPW+ A++I L MGGR   
Sbjct: 61  EEQQRLDEEGAAIAEAVALHVLLGEDSDDSRKMALKKDEGFNPWDCATSIDLLMGGRSGI 120

Query: 575 PGNQGYTRYSLEGLGRVSDAYGGMACKWNDWGLGSWSLSQDIFGKERHAPYFEERIRGTT 396
           P  QG T+ SL  +  VS+ Y    C+WN  G G WS+S   F ++ H PYFEE    TT
Sbjct: 121 P-CQGPTKCSLNEIEWVSNVYES-GCEWNYLGNGDWSVSSGPFRRDLHPPYFEEGSWETT 178

Query: 395 EISAGLIAAQAVSSLQIVEDAHAESILINRMLR 297
           EISAGL+AAQAVSSLQI EDA  ++I+ N MLR
Sbjct: 179 EISAGLLAAQAVSSLQIAEDAPVDTIVFNGMLR 211


>ref|XP_002305242.1| predicted protein [Populus trichocarpa] gi|222848206|gb|EEE85753.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  209 bits (532), Expect = 2e-51
 Identities = 119/213 (55%), Positives = 141/213 (66%), Gaps = 1/213 (0%)
 Frame = -1

Query: 932 MDTIACIQAPPV-RKGKKKQAKDEVDRLKQAEKKKRRLEKALATSAAIRSELXXXXXXXX 756
           MD+IAC +  PV RK KKKQ K E+DRL+QAEKKKRRLEKALATSAAIRSEL        
Sbjct: 1   MDSIACNKVQPVARKVKKKQVKGEMDRLRQAEKKKRRLEKALATSAAIRSELEKKKQKKK 60

Query: 755 XXXQRLDEEGAAIAEAVAMHVLLGEDSDESCKILLQQDEGFNPWNRASNIGLFMGGRKAG 576
              QRLDEEGAAIAEAVA+HVLLGEDSD+SC I+L ++EGFN W  A NI +FMG ++  
Sbjct: 61  EEQQRLDEEGAAIAEAVALHVLLGEDSDDSCNIVLNKEEGFNTWGCAGNIDVFMGEKRPS 120

Query: 575 PGNQGYTRYSLEGLGRVSDAYGGMACKWNDWGLGSWSLSQDIFGKERHAPYFEERIRGTT 396
             ++  +  S E +G +S  Y G  CKW D     W  S +   K     YF++   GTT
Sbjct: 121 LPHEDCSGNSFERIGWLSSTY-GTGCKWGDRENNDWPFSYESLQKSLPVQYFDDGSWGTT 179

Query: 395 EISAGLIAAQAVSSLQIVEDAHAESILINRMLR 297
           E S  LIAAQA SSLQI EDA  ++ L N MLR
Sbjct: 180 EFSDELIAAQAASSLQIAEDADGDTFLFNGMLR 212


>ref|XP_002327586.1| predicted protein [Populus trichocarpa] gi|222836140|gb|EEE74561.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  207 bits (528), Expect = 4e-51
 Identities = 119/214 (55%), Positives = 146/214 (68%), Gaps = 1/214 (0%)
 Frame = -1

Query: 932 MDTIACIQAPPV-RKGKKKQAKDEVDRLKQAEKKKRRLEKALATSAAIRSELXXXXXXXX 756
           MD+IAC +  PV RK KKKQ K E+DRL+QAEKKKRRLEKALATSAAIRSEL        
Sbjct: 1   MDSIACNKVQPVVRKVKKKQVKGEMDRLRQAEKKKRRLEKALATSAAIRSELEKKKQKKK 60

Query: 755 XXXQRLDEEGAAIAEAVAMHVLLGEDSDESCKILLQQDEGFNPWNRASNIGLFMGGRKAG 576
              QRLDEEGAAIAEAVA+HVLLGEDSD+SCKI+L ++E FN W+ A NI LF+G ++  
Sbjct: 61  EEQQRLDEEGAAIAEAVALHVLLGEDSDDSCKIVLNKEEVFNTWSCAGNIDLFVGEKRPS 120

Query: 575 PGNQGYTRYSLEGLGRVSDAYGGMACKWNDWGLGSWSLSQDIFGKERHAPYFEERIRGTT 396
             ++  +  S E +G V   Y G  C+W +      + S +   +     YF++   GTT
Sbjct: 121 LPHKDCSGNSFERIGWVPCTY-GTGCQWGERENNDLTFSYESLRRSMPVQYFDDGSWGTT 179

Query: 395 EISAGLIAAQAVSSLQIVEDAHAESILINRMLRR 294
           E SAGLIAAQAVSSLQI EDAH ++ L + MLRR
Sbjct: 180 EFSAGLIAAQAVSSLQIAEDAHGDTFLFDGMLRR 213


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