BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006450
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272751.1| PREDICTED: ribosomal RNA-processing protein ...   355   1e-95
emb|CAN65396.1| hypothetical protein VITISV_009442 [Vitis vinifera]   353   3e-95
ref|XP_002521480.1| Cerebral protein, putative [Ricinus communis...   346   5e-93
emb|CBI34852.3| unnamed protein product [Vitis vinifera]              344   2e-92
ref|XP_002298548.1| predicted protein [Populus trichocarpa] gi|2...   343   3e-92

>ref|XP_002272751.1| PREDICTED: ribosomal RNA-processing protein 8 [Vitis vinifera]
          Length = 263

 Score =  355 bits (911), Expect = 1e-95
 Identities = 168/249 (67%), Positives = 204/249 (81%), Gaps = 6/249 (2%)
 Frame = -2

Query: 950 QNKSNPTKRQKTN------TGGETSFLEKMRARLAGGHFRMINEKLYTCTGTEALDYFKD 789
           QN  + TK+++ +      +   +SFL+KMRARL+GGHFRMINEKLYTCTG+EAL YF++
Sbjct: 15  QNGESQTKKKRKHEKVDGKSKSSSSFLDKMRARLSGGHFRMINEKLYTCTGSEALSYFEE 74

Query: 788 NPTLFDMYHSGYQEQMSNWPEKPVNVIIQWIKEHSPYLVVVDFGCGDARLAKSVKNKVYS 609
           +P LF++YH GYQEQMS+WP++PVN+II+W+K+HSP L+V DFGCGDARLA++VKNKV+S
Sbjct: 75  DPALFNVYHVGYQEQMSHWPQQPVNIIIKWLKDHSPSLIVADFGCGDARLARNVKNKVFS 134

Query: 608 FDLVSNNPSVVQCDMENTPLDSSSVDIAVFCLSLMGTNFPSYLREAQRVLKPSGWLLIAE 429
           FDLVS++PSV+ CDM NTPL+SSS+D+AVFCLSLMGTNF SYL+EA RVLKP GWLLIAE
Sbjct: 135 FDLVSSDPSVIVCDMSNTPLESSSIDVAVFCLSLMGTNFSSYLQEAHRVLKPCGWLLIAE 194

Query: 428 VKSRFDPKSGGADPNRFLKAVCKLGFSSVSKDFSNKMXXXXXXXXXXXXXXXXXEIVWPE 249
           VKSRFDP +GGADPNRF KA+CKLGF+  SKDFSNKM                 EI WPE
Sbjct: 195 VKSRFDPSNGGADPNRFSKAICKLGFTLESKDFSNKMFILLYFKKKEKQNSKVKEIDWPE 254

Query: 248 LKPCLYKRR 222
           LKPCLYKRR
Sbjct: 255 LKPCLYKRR 263


>emb|CAN65396.1| hypothetical protein VITISV_009442 [Vitis vinifera]
          Length = 237

 Score =  353 bits (907), Expect = 3e-95
 Identities = 164/225 (72%), Positives = 194/225 (86%)
 Frame = -2

Query: 896 SFLEKMRARLAGGHFRMINEKLYTCTGTEALDYFKDNPTLFDMYHSGYQEQMSNWPEKPV 717
           SFL+KMRARL+GGHFRMINEKLYTCTG+EAL YF+++P LF++YH+GYQEQMS+WP++PV
Sbjct: 13  SFLDKMRARLSGGHFRMINEKLYTCTGSEALSYFEEDPALFNVYHAGYQEQMSHWPQQPV 72

Query: 716 NVIIQWIKEHSPYLVVVDFGCGDARLAKSVKNKVYSFDLVSNNPSVVQCDMENTPLDSSS 537
           N+II+W+K+HSP L+V DFGCGDARLA++VKNKV+SFDLVS++PSV+ CDM NTPL+SSS
Sbjct: 73  NIIIKWLKDHSPSLIVADFGCGDARLARNVKNKVFSFDLVSSDPSVIVCDMSNTPLESSS 132

Query: 536 VDIAVFCLSLMGTNFPSYLREAQRVLKPSGWLLIAEVKSRFDPKSGGADPNRFLKAVCKL 357
           +D+AVFCLSLMGTNF SYL+EA RVLKP GWLLIAEVKSRFDP +GGADPNRF KA+CKL
Sbjct: 133 IDVAVFCLSLMGTNFSSYLQEAHRVLKPCGWLLIAEVKSRFDPSNGGADPNRFSKAICKL 192

Query: 356 GFSSVSKDFSNKMXXXXXXXXXXXXXXXXXEIVWPELKPCLYKRR 222
           GF+  SKDFSNKM                 EI WPELKPCLYKRR
Sbjct: 193 GFTLESKDFSNKMFILLYFKKKEKQNSKVKEIDWPELKPCLYKRR 237


>ref|XP_002521480.1| Cerebral protein, putative [Ricinus communis]
           gi|223539379|gb|EEF40970.1| Cerebral protein, putative
           [Ricinus communis]
          Length = 264

 Score =  346 bits (888), Expect = 5e-93
 Identities = 171/240 (71%), Positives = 196/240 (81%)
 Frame = -2

Query: 941 SNPTKRQKTNTGGETSFLEKMRARLAGGHFRMINEKLYTCTGTEALDYFKDNPTLFDMYH 762
           S  +KR K+++    SFLEKMRARL+GGHFRM+NEKLYTCTG EAL+YFKD+P+LFDMYH
Sbjct: 30  SASSKRPKSSS----SFLEKMRARLSGGHFRMLNEKLYTCTGDEALNYFKDDPSLFDMYH 85

Query: 761 SGYQEQMSNWPEKPVNVIIQWIKEHSPYLVVVDFGCGDARLAKSVKNKVYSFDLVSNNPS 582
           +GYQEQMS+WPE+PVN+II W+K  +  LVV DFGCGDARLAK+VKNKVYSFDLVS++PS
Sbjct: 86  AGYQEQMSHWPEQPVNIIINWLKNRNSSLVVADFGCGDARLAKNVKNKVYSFDLVSSDPS 145

Query: 581 VVQCDMENTPLDSSSVDIAVFCLSLMGTNFPSYLREAQRVLKPSGWLLIAEVKSRFDPKS 402
           V+ CDM  TPLD+SSVD+AVFCLSLMGTNFP YL+EA RVLKPSGWLLIAEVKSRFDP +
Sbjct: 146 VIACDMSKTPLDASSVDVAVFCLSLMGTNFPRYLQEAHRVLKPSGWLLIAEVKSRFDPST 205

Query: 401 GGADPNRFLKAVCKLGFSSVSKDFSNKMXXXXXXXXXXXXXXXXXEIVWPELKPCLYKRR 222
           GGAD N F KAV  LGF+S+ KDFSNKM                 EI WPELKPCLYKRR
Sbjct: 206 GGADANEFSKAVTDLGFASMLKDFSNKM-FILLYFQKKKQGSKKKEIEWPELKPCLYKRR 264


>emb|CBI34852.3| unnamed protein product [Vitis vinifera]
          Length = 220

 Score =  344 bits (883), Expect = 2e-92
 Identities = 160/220 (72%), Positives = 188/220 (85%)
 Frame = -2

Query: 881 MRARLAGGHFRMINEKLYTCTGTEALDYFKDNPTLFDMYHSGYQEQMSNWPEKPVNVIIQ 702
           MRARL+GGHFRMINEKLYTCTG+EAL YF+++P LF++YH GYQEQMS+WP++PVN+II+
Sbjct: 1   MRARLSGGHFRMINEKLYTCTGSEALSYFEEDPALFNVYHVGYQEQMSHWPQQPVNIIIK 60

Query: 701 WIKEHSPYLVVVDFGCGDARLAKSVKNKVYSFDLVSNNPSVVQCDMENTPLDSSSVDIAV 522
           W+K+HSP L+V DFGCGDARLA++VKNKV+SFDLVS++PSV+ CDM NTPL+SSS+D+AV
Sbjct: 61  WLKDHSPSLIVADFGCGDARLARNVKNKVFSFDLVSSDPSVIVCDMSNTPLESSSIDVAV 120

Query: 521 FCLSLMGTNFPSYLREAQRVLKPSGWLLIAEVKSRFDPKSGGADPNRFLKAVCKLGFSSV 342
           FCLSLMGTNF SYL+EA RVLKP GWLLIAEVKSRFDP +GGADPNRF KA+CKLGF+  
Sbjct: 121 FCLSLMGTNFSSYLQEAHRVLKPCGWLLIAEVKSRFDPSNGGADPNRFSKAICKLGFTLE 180

Query: 341 SKDFSNKMXXXXXXXXXXXXXXXXXEIVWPELKPCLYKRR 222
           SKDFSNKM                 EI WPELKPCLYKRR
Sbjct: 181 SKDFSNKMFILLYFKKKEKQNSKVKEIDWPELKPCLYKRR 220


>ref|XP_002298548.1| predicted protein [Populus trichocarpa] gi|222845806|gb|EEE83353.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  343 bits (881), Expect = 3e-92
 Identities = 162/220 (73%), Positives = 182/220 (82%)
 Frame = -2

Query: 881 MRARLAGGHFRMINEKLYTCTGTEALDYFKDNPTLFDMYHSGYQEQMSNWPEKPVNVIIQ 702
           MRARL+GGHFRMINEKLYTCTG EALDYFK++P+LFDMYH+GYQEQMS+WPE+PVN+IIQ
Sbjct: 1   MRARLSGGHFRMINEKLYTCTGDEALDYFKEDPSLFDMYHTGYQEQMSHWPEQPVNIIIQ 60

Query: 701 WIKEHSPYLVVVDFGCGDARLAKSVKNKVYSFDLVSNNPSVVQCDMENTPLDSSSVDIAV 522
           W+K  S  LVV DFGCGDARLAK+VKNKV+SFDLVSN+PSV+ CDM NTPLD+SS+D+AV
Sbjct: 61  WLKARSSSLVVADFGCGDARLAKNVKNKVFSFDLVSNDPSVIACDMSNTPLDASSIDVAV 120

Query: 521 FCLSLMGTNFPSYLREAQRVLKPSGWLLIAEVKSRFDPKSGGADPNRFLKAVCKLGFSSV 342
           FCLSLMGTNFPSYL EA RVLKPSGWLLIAEVKSR DP +GGADP  F K++  LGF+S 
Sbjct: 121 FCLSLMGTNFPSYLEEAHRVLKPSGWLLIAEVKSRLDPNTGGADPKMFSKSISDLGFTST 180

Query: 341 SKDFSNKMXXXXXXXXXXXXXXXXXEIVWPELKPCLYKRR 222
            KDFSNKM                  I WPELKPCLYKRR
Sbjct: 181 LKDFSNKMFVLLYFQKKEKETSTRKGIEWPELKPCLYKRR 220