BLASTX nr result
ID: Coptis21_contig00006439
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00006439
(957 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272916.1| PREDICTED: 60S ribosomal protein L7-1 [Vitis... 188 4e-64
ref|XP_002527311.1| 60S ribosomal protein L7, putative [Ricinus ... 181 6e-60
ref|XP_004148505.1| PREDICTED: 60S ribosomal protein L7-1-like [... 183 2e-59
ref|XP_002297799.1| predicted protein [Populus trichocarpa] gi|2... 188 4e-58
ref|XP_002304722.1| predicted protein [Populus trichocarpa] gi|2... 183 3e-57
>ref|XP_002272916.1| PREDICTED: 60S ribosomal protein L7-1 [Vitis vinifera]
gi|297745096|emb|CBI38935.3| unnamed protein product
[Vitis vinifera]
Length = 246
Score = 188 bits (478), Expect(2) = 4e-64
Identities = 92/154 (59%), Positives = 116/154 (75%)
Frame = -3
Query: 955 NKKLVFKRAEQFIQEYRTRELDFVNMKQRRRLGKSASALPKSTLVFIIRIRSTNNAMHSK 776
NK K AEQ+IQEYR RELD + MK R + K + S L+F+IRI+ N+ MH K
Sbjct: 44 NKAFNLKTAEQYIQEYRNRELDLIQMKHRGKKRKLSLETLDSKLLFVIRIQGKND-MHPK 102
Query: 775 AKKILHRLRLTRVFSGVFVKANEGLMDMLRMVEPFVTYGYPNLKSVKELVFKKGFLNINK 596
+KIL+ LRL ++F GV VKANEG+++ML+ VEP+V YGYPNLK+V+EL++KKGF I
Sbjct: 103 TRKILYFLRLRKIFDGVLVKANEGILEMLQKVEPYVAYGYPNLKNVRELIYKKGFAKIEG 162
Query: 595 QSVPLTDNNIIEQELGKHGVLCIEDIVHQIATAG 494
Q VPLTDNNIIEQ LGKHG++CIEDIVH+IA G
Sbjct: 163 QKVPLTDNNIIEQALGKHGIMCIEDIVHEIANVG 196
Score = 83.6 bits (205), Expect(2) = 4e-64
Identities = 38/50 (76%), Positives = 40/50 (80%)
Frame = -1
Query: 414 PHFKDVTSVLWPFKLNRPEGGLQGKKKPFKGGGDAGNREDHINELINMMN 265
PHFK+V S LWPF LN+PEGG QGKKK FK GGDAGNR D INELI MN
Sbjct: 197 PHFKEVNSFLWPFTLNKPEGGFQGKKKLFKEGGDAGNRGDKINELIGKMN 246
>ref|XP_002527311.1| 60S ribosomal protein L7, putative [Ricinus communis]
gi|223533311|gb|EEF35063.1| 60S ribosomal protein L7,
putative [Ricinus communis]
Length = 247
Score = 181 bits (460), Expect(2) = 6e-60
Identities = 88/148 (59%), Positives = 115/148 (77%)
Frame = -3
Query: 937 KRAEQFIQEYRTRELDFVNMKQRRRLGKSASALPKSTLVFIIRIRSTNNAMHSKAKKILH 758
KR EQFI+++R +ELDF+ MKQR + KSAS PKS L+FI+RI NAMH + +KIL+
Sbjct: 51 KRPEQFIKDFRDKELDFIRMKQRAKKPKSASLTPKSKLMFIVRIPG-KNAMHPRTRKILY 109
Query: 757 RLRLTRVFSGVFVKANEGLMDMLRMVEPFVTYGYPNLKSVKELVFKKGFLNINKQSVPLT 578
L+L R F GVFVKA+ GL++ L+ VEP+VT+GYPNLK+V EL+ KKG+ +N Q VPL
Sbjct: 110 NLKLLRNFHGVFVKASAGLLEKLQRVEPYVTFGYPNLKNVTELIRKKGYGMLNNQRVPLI 169
Query: 577 DNNIIEQELGKHGVLCIEDIVHQIATAG 494
DNNI+EQ LGK G+LC+EDI+H+IA G
Sbjct: 170 DNNIVEQALGKFGILCLEDIIHEIANVG 197
Score = 76.6 bits (187), Expect(2) = 6e-60
Identities = 35/50 (70%), Positives = 40/50 (80%)
Frame = -1
Query: 414 PHFKDVTSVLWPFKLNRPEGGLQGKKKPFKGGGDAGNREDHINELINMMN 265
PHFKDV S L PF L++P+GGLQGKK FK GGD GNRED IN+LI+ MN
Sbjct: 198 PHFKDVNSFLGPFALSKPKGGLQGKKALFKDGGDTGNREDKINDLIDKMN 247
>ref|XP_004148505.1| PREDICTED: 60S ribosomal protein L7-1-like [Cucumis sativus]
gi|449530031|ref|XP_004172000.1| PREDICTED: 60S
ribosomal protein L7-1-like [Cucumis sativus]
gi|449532976|ref|XP_004173453.1| PREDICTED: 60S
ribosomal protein L7-1-like [Cucumis sativus]
Length = 249
Score = 183 bits (465), Expect(2) = 2e-59
Identities = 90/154 (58%), Positives = 116/154 (75%)
Frame = -3
Query: 955 NKKLVFKRAEQFIQEYRTRELDFVNMKQRRRLGKSASALPKSTLVFIIRIRSTNNAMHSK 776
NK K E+F++EYR RELD V MK R + +SA S L+FIIRI+ N+ MH K
Sbjct: 46 NKDGFIKLPEEFVREYRARELDLVKMKHRIKRKRSAIVPSTSKLIFIIRIQGKND-MHPK 104
Query: 775 AKKILHRLRLTRVFSGVFVKANEGLMDMLRMVEPFVTYGYPNLKSVKELVFKKGFLNINK 596
+KIL+ L L+R+FS VF KANE ++ L+ VEP+VTYGYPNLK+V+EL++KKGF I+K
Sbjct: 105 TRKILYSLGLSRIFSAVFAKANESILGKLQRVEPYVTYGYPNLKNVRELIYKKGFAKIDK 164
Query: 595 QSVPLTDNNIIEQELGKHGVLCIEDIVHQIATAG 494
Q VPLTDNNIIEQ LGKHG++C+ED+VH+IA G
Sbjct: 165 QRVPLTDNNIIEQALGKHGIVCMEDMVHEIANVG 198
Score = 72.8 bits (177), Expect(2) = 2e-59
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = -1
Query: 414 PHFKDVTSVLWPFKLNRPEGG-LQGKKKPFKGGGDAGNREDHINELINMMN 265
PHFK+V S LWPF+L +P G LQGKK +K GGD+GNRED IN+LIN MN
Sbjct: 199 PHFKEVISFLWPFELEKPGGRCLQGKKSSYKEGGDSGNREDDINDLINEMN 249
>ref|XP_002297799.1| predicted protein [Populus trichocarpa] gi|222845057|gb|EEE82604.1|
predicted protein [Populus trichocarpa]
Length = 247
Score = 188 bits (477), Expect(2) = 4e-58
Identities = 84/148 (56%), Positives = 120/148 (81%)
Frame = -3
Query: 937 KRAEQFIQEYRTRELDFVNMKQRRRLGKSASALPKSTLVFIIRIRSTNNAMHSKAKKILH 758
KR EQF++E+R +ELD + MKQR + KSA ++P S L+F+IR+ N+ MH K + IL+
Sbjct: 51 KRPEQFVREFRDKELDLIRMKQRTKRAKSALSIPNSKLLFVIRVHGKND-MHPKTRNILY 109
Query: 757 RLRLTRVFSGVFVKANEGLMDMLRMVEPFVTYGYPNLKSVKELVFKKGFLNINKQSVPLT 578
+LRLTR+F GVF+KA +G++++L+ VEP+VTYGYPNLK+V +L++KKG+ I+ + VPL
Sbjct: 110 KLRLTRIFHGVFLKATQGVLELLQKVEPYVTYGYPNLKNVSDLIYKKGYGKIDNKRVPLI 169
Query: 577 DNNIIEQELGKHGVLCIEDIVHQIATAG 494
DNNIIEQ LGKHG++C+EDIVH++A AG
Sbjct: 170 DNNIIEQALGKHGIVCLEDIVHEVANAG 197
Score = 63.9 bits (154), Expect(2) = 4e-58
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = -1
Query: 414 PHFKDVTSVLWPFKLNRPEGGLQGKKKPFKGGGDAGNREDHINELINMMN 265
PHFK++ S L F LN+P+ GL GKK + GGD GNRE+ IN+LIN MN
Sbjct: 198 PHFKEIISFLGSFSLNKPKEGLLGKKALYIDGGDTGNRENQINDLINKMN 247
>ref|XP_002304722.1| predicted protein [Populus trichocarpa] gi|222842154|gb|EEE79701.1|
predicted protein [Populus trichocarpa]
Length = 247
Score = 183 bits (465), Expect(2) = 3e-57
Identities = 84/148 (56%), Positives = 118/148 (79%)
Frame = -3
Query: 937 KRAEQFIQEYRTRELDFVNMKQRRRLGKSASALPKSTLVFIIRIRSTNNAMHSKAKKILH 758
KR EQ ++E+R RELD + MKQR + KSA + P S L+F+IR+ N+ MH K +KIL+
Sbjct: 51 KRPEQLVREFRDRELDLIRMKQRTKRAKSALSTPNSKLLFVIRLHGKND-MHPKTRKILY 109
Query: 757 RLRLTRVFSGVFVKANEGLMDMLRMVEPFVTYGYPNLKSVKELVFKKGFLNINKQSVPLT 578
LRLTR+F GVF+KA+ G++++L+ VEP+VTYGYPN+K+V +L++KKG+ I+ + VPL
Sbjct: 110 NLRLTRIFHGVFLKASPGVLELLQKVEPYVTYGYPNVKNVSDLIYKKGYGKIDNKRVPLI 169
Query: 577 DNNIIEQELGKHGVLCIEDIVHQIATAG 494
DNNIIEQ LGK+G+LC+EDIVH++A AG
Sbjct: 170 DNNIIEQALGKYGILCLEDIVHEVANAG 197
Score = 65.5 bits (158), Expect(2) = 3e-57
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = -1
Query: 414 PHFKDVTSVLWPFKLNRPEGGLQGKKKPFKGGGDAGNREDHINELINMMN 265
PHF+++ + L F LN+P+ GLQGK+ FK GGD GNRE+ IN+LI+ MN
Sbjct: 198 PHFREILNFLGSFSLNKPKEGLQGKRALFKDGGDTGNRENQINDLIDKMN 247