BLASTX nr result

ID: Coptis21_contig00006434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006434
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264869.2| PREDICTED: 50S ribosomal protein L19, chloro...   194   6e-48
emb|CAN82787.1| hypothetical protein VITISV_037813 [Vitis vinifera]   194   6e-48
ref|NP_001236421.1| uncharacterized protein LOC100500328 [Glycin...   189   3e-46
gb|ACU14853.1| unknown [Glycine max]                                  189   3e-46
ref|NP_001238523.1| uncharacterized protein LOC100305649 [Glycin...   189   3e-46

>ref|XP_002264869.2| PREDICTED: 50S ribosomal protein L19, chloroplastic [Vitis
           vinifera] gi|296088907|emb|CBI38456.3| unnamed protein
           product [Vitis vinifera]
          Length = 231

 Score =  194 bits (494), Expect = 6e-48
 Identities = 99/117 (84%), Positives = 104/117 (88%)
 Frame = +1

Query: 1   VKLGDIMGILNKRAIEASDKERPTPDLRTGDIVQIKLEVPENRRRQSIYKGIVISKQNAG 180
           VKLGDIMGILNKRAIEAS+KERP PDLRTGDIV+IKLEVPENRRR SIYKGIVISKQNAG
Sbjct: 115 VKLGDIMGILNKRAIEASEKERPVPDLRTGDIVEIKLEVPENRRRLSIYKGIVISKQNAG 174

Query: 181 IHTTIRIRNIIAGIGVEIVFPVYSPNIKEIXXXXXXXXXXARLYFLRDKLPRLSTFK 351
           IHTTIR+R IIAG+GVEIVFPVYSPNIKEI          ARLY+LRDKLPRLSTFK
Sbjct: 175 IHTTIRVRRIIAGVGVEIVFPVYSPNIKEIKVVNHRKVRRARLYYLRDKLPRLSTFK 231


>emb|CAN82787.1| hypothetical protein VITISV_037813 [Vitis vinifera]
          Length = 231

 Score =  194 bits (494), Expect = 6e-48
 Identities = 99/117 (84%), Positives = 104/117 (88%)
 Frame = +1

Query: 1   VKLGDIMGILNKRAIEASDKERPTPDLRTGDIVQIKLEVPENRRRQSIYKGIVISKQNAG 180
           VKLGDIMGILNKRAIEAS+KERP PDLRTGDIV+IKLEVPENRRR SIYKGIVISKQNAG
Sbjct: 115 VKLGDIMGILNKRAIEASEKERPVPDLRTGDIVEIKLEVPENRRRLSIYKGIVISKQNAG 174

Query: 181 IHTTIRIRNIIAGIGVEIVFPVYSPNIKEIXXXXXXXXXXARLYFLRDKLPRLSTFK 351
           IHTTIR+R IIAG+GVEIVFPVYSPNIKEI          ARLY+LRDKLPRLSTFK
Sbjct: 175 IHTTIRVRRIIAGVGVEIVFPVYSPNIKEIKVVNHRKVRRARLYYLRDKLPRLSTFK 231


>ref|NP_001236421.1| uncharacterized protein LOC100500328 [Glycine max]
           gi|255630036|gb|ACU15370.1| unknown [Glycine max]
          Length = 213

 Score =  189 bits (480), Expect = 3e-46
 Identities = 96/117 (82%), Positives = 103/117 (88%)
 Frame = +1

Query: 1   VKLGDIMGILNKRAIEASDKERPTPDLRTGDIVQIKLEVPENRRRQSIYKGIVISKQNAG 180
           VKLGDIMGILN+RAIEAS+K+RPTPD+RTGDIV+IKLEVPEN+RR SIYKGIVISKQNAG
Sbjct: 97  VKLGDIMGILNQRAIEASEKQRPTPDIRTGDIVEIKLEVPENKRRLSIYKGIVISKQNAG 156

Query: 181 IHTTIRIRNIIAGIGVEIVFPVYSPNIKEIXXXXXXXXXXARLYFLRDKLPRLSTFK 351
           IHTTIRIR IIAG GVEIVFPVYSPNIKEI          ARLY+LRDKLPR STFK
Sbjct: 157 IHTTIRIRRIIAGTGVEIVFPVYSPNIKEIKVVSHRKVRRARLYYLRDKLPRFSTFK 213


>gb|ACU14853.1| unknown [Glycine max]
          Length = 212

 Score =  189 bits (480), Expect = 3e-46
 Identities = 96/117 (82%), Positives = 103/117 (88%)
 Frame = +1

Query: 1   VKLGDIMGILNKRAIEASDKERPTPDLRTGDIVQIKLEVPENRRRQSIYKGIVISKQNAG 180
           VKLGDIMGILN+RAIEAS+K+RPTPD+RTGDIV+IKLEVPEN+RR SIYKGIVISKQNAG
Sbjct: 96  VKLGDIMGILNQRAIEASEKQRPTPDIRTGDIVEIKLEVPENKRRLSIYKGIVISKQNAG 155

Query: 181 IHTTIRIRNIIAGIGVEIVFPVYSPNIKEIXXXXXXXXXXARLYFLRDKLPRLSTFK 351
           IHTTIRIR IIAG GVEIVFPVYSPNIKEI          ARLY+LRDKLPR STFK
Sbjct: 156 IHTTIRIRRIIAGTGVEIVFPVYSPNIKEIKVVSHRKVRRARLYYLRDKLPRFSTFK 212


>ref|NP_001238523.1| uncharacterized protein LOC100305649 [Glycine max]
           gi|255626193|gb|ACU13441.1| unknown [Glycine max]
          Length = 213

 Score =  189 bits (479), Expect = 3e-46
 Identities = 95/117 (81%), Positives = 103/117 (88%)
 Frame = +1

Query: 1   VKLGDIMGILNKRAIEASDKERPTPDLRTGDIVQIKLEVPENRRRQSIYKGIVISKQNAG 180
           VKLGD+MGILN+RAIEAS+K+RPTPD+RTGDIV+IKLEVPEN+RR SIYKGIVISKQNAG
Sbjct: 97  VKLGDVMGILNQRAIEASEKQRPTPDIRTGDIVEIKLEVPENKRRLSIYKGIVISKQNAG 156

Query: 181 IHTTIRIRNIIAGIGVEIVFPVYSPNIKEIXXXXXXXXXXARLYFLRDKLPRLSTFK 351
           IHTTIRIR IIAG GVEIVFPVYSPNIKEI          ARLY+LRDKLPR STFK
Sbjct: 157 IHTTIRIRRIIAGTGVEIVFPVYSPNIKEIRVVSHRKVRRARLYYLRDKLPRFSTFK 213


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