BLASTX nr result

ID: Coptis21_contig00006432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006432
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525055.1| PREDICTED: ras-related protein RABH1e-like [...   365   4e-99
ref|XP_002871412.1| hypothetical protein ARALYDRAFT_487852 [Arab...   363   1e-98
ref|XP_002307084.1| predicted protein [Populus trichocarpa] gi|2...   363   2e-98
ref|XP_002271220.2| PREDICTED: ras-related protein RABH1e-like [...   362   2e-98
ref|NP_196588.3| RAB GTPase H1E [Arabidopsis thaliana] gi|753349...   362   2e-98

>ref|XP_003525055.1| PREDICTED: ras-related protein RABH1e-like [Glycine max]
          Length = 207

 Score =  365 bits (937), Expect = 4e-99
 Identities = 187/195 (95%), Positives = 191/195 (97%)
 Frame = -2

Query: 585 MAGVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 406
           MA VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 405 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEEVRTERGSDVIIVLV 226
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNT+KW+EEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRTERGSDVIIVLV 120

Query: 225 GNKTDLVDKRQVSIEEGDTKSRDDGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 46
           GNKTDLVDKRQVSIEEGD KSR+ G+MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDAKSREFGIMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 45  QEDMVDVNLKSTVNS 1
           QEDMVDVNLK TVNS
Sbjct: 181 QEDMVDVNLKPTVNS 195


>ref|XP_002871412.1| hypothetical protein ARALYDRAFT_487852 [Arabidopsis lyrata subsp.
           lyrata] gi|297317249|gb|EFH47671.1| hypothetical protein
           ARALYDRAFT_487852 [Arabidopsis lyrata subsp. lyrata]
          Length = 207

 Score =  363 bits (932), Expect = 1e-98
 Identities = 186/195 (95%), Positives = 191/195 (97%)
 Frame = -2

Query: 585 MAGVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 406
           MA VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 405 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEEVRTERGSDVIIVLV 226
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIE+VRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120

Query: 225 GNKTDLVDKRQVSIEEGDTKSRDDGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 46
           GNKTDLVDKRQVSIEEGD K+RD GV+FIETSAKAGFNIKPLFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 45  QEDMVDVNLKSTVNS 1
           QEDMVDVNLK++ NS
Sbjct: 181 QEDMVDVNLKTSTNS 195


>ref|XP_002307084.1| predicted protein [Populus trichocarpa] gi|222856533|gb|EEE94080.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  363 bits (931), Expect = 2e-98
 Identities = 186/195 (95%), Positives = 190/195 (97%)
 Frame = -2

Query: 585 MAGVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 406
           MA VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60

Query: 405 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEEVRTERGSDVIIVLV 226
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEEVRTERG DVI+VLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEEVRTERGGDVIVVLV 120

Query: 225 GNKTDLVDKRQVSIEEGDTKSRDDGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 46
           GNKTDLVDKRQVSIEEGD K+R+ GVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDGKAREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 45  QEDMVDVNLKSTVNS 1
           QEDMVDVNLK TVNS
Sbjct: 181 QEDMVDVNLKPTVNS 195


>ref|XP_002271220.2| PREDICTED: ras-related protein RABH1e-like [Vitis vinifera]
          Length = 207

 Score =  362 bits (930), Expect = 2e-98
 Identities = 186/195 (95%), Positives = 190/195 (97%)
 Frame = -2

Query: 585 MAGVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 406
           MA VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MAVVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDATYQATIGIDFLSKTMYLEDRTIRL 60

Query: 405 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEEVRTERGSDVIIVLV 226
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDV NRQSFLNTSKWIEEVRTERG+DVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVGNRQSFLNTSKWIEEVRTERGTDVIIVLV 120

Query: 225 GNKTDLVDKRQVSIEEGDTKSRDDGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 46
           GNKTDLVDKRQVSIEEGDTKSRD GVMFIETSAKAGFNIKPLFRKIA+ALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDTKSRDFGVMFIETSAKAGFNIKPLFRKIASALPGMETLSSTK 180

Query: 45  QEDMVDVNLKSTVNS 1
           QEDMVDVNLK +VNS
Sbjct: 181 QEDMVDVNLKPSVNS 195


>ref|NP_196588.3| RAB GTPase H1E [Arabidopsis thaliana]
           gi|75334962|sp|Q9LFT9.1|RAH1E_ARATH RecName:
           Full=Ras-related protein RABH1e; Short=AtRABH1e
           gi|8953407|emb|CAB96682.1| GTP-binding protein
           [Arabidopsis thaliana] gi|332004131|gb|AED91514.1| RAB
           GTPase H1E [Arabidopsis thaliana]
          Length = 207

 Score =  362 bits (930), Expect = 2e-98
 Identities = 186/195 (95%), Positives = 191/195 (97%)
 Frame = -2

Query: 585 MAGVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 406
           MA VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 405 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEEVRTERGSDVIIVLV 226
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIE+VRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120

Query: 225 GNKTDLVDKRQVSIEEGDTKSRDDGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 46
           GNKTDLVDKRQVSIEEGD K+RD GV+FIETSAKAGFNIKPLFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 45  QEDMVDVNLKSTVNS 1
           QEDMVDVNLK++ NS
Sbjct: 181 QEDMVDVNLKTSSNS 195