BLASTX nr result

ID: Coptis21_contig00006415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006415
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138042.1| PREDICTED: CBS domain-containing protein CBS...   150   3e-34
ref|XP_002318739.1| predicted protein [Populus trichocarpa] gi|2...   147   2e-33
gb|ABK94323.1| unknown [Populus trichocarpa]                          147   2e-33
ref|XP_002283958.1| PREDICTED: CBS domain-containing protein CBS...   143   3e-32
ref|XP_003634219.1| PREDICTED: CBS domain-containing protein CBS...   143   3e-32

>ref|XP_004138042.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like [Cucumis
           sativus] gi|449520507|ref|XP_004167275.1| PREDICTED: CBS
           domain-containing protein CBSCBSPB5-like [Cucumis
           sativus]
          Length = 540

 Score =  150 bits (378), Expect = 3e-34
 Identities = 76/120 (63%), Positives = 90/120 (75%)
 Frame = -1

Query: 710 RLHRFNCDTRSLTDLITSILQRMGDDIDRNQLPHILYEDEDNDKVVLASDGDLAAAVDHA 531
           R+HRF+CDTRSLTD+IT+ILQR+GDDIDRN+LP ILYEDED+DKVVL SD DLAAAV+HA
Sbjct: 418 RMHRFSCDTRSLTDVITAILQRVGDDIDRNKLPQILYEDEDHDKVVLGSDSDLAAAVEHA 477

Query: 530 RQVGMKGLRLHLDYLXXXXXXXXXGSLDYAQKDAWATAYSSXXXXXXXXXXXXXXAYLRR 351
           R  G KGLRLHL+Y          G++DYAQ+DAWA+AYS+              AYLRR
Sbjct: 478 RLAGWKGLRLHLEYPGSHGRRRDAGNMDYAQRDAWASAYSAVAAGAALVAGLGVLAYLRR 537


>ref|XP_002318739.1| predicted protein [Populus trichocarpa] gi|222859412|gb|EEE96959.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score =  147 bits (371), Expect = 2e-33
 Identities = 77/121 (63%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
 Frame = -1

Query: 710 RLHRFNCDTRSLTDLITSILQRMGDDIDRNQLPHILYEDEDNDKVVLASDGDLAAAVDHA 531
           R+HRF C+TRSLTDLITSILQR+GDDI+RN LP ILYEDED+DKVVLASD DL  AV+HA
Sbjct: 412 RMHRFTCETRSLTDLITSILQRLGDDINRNNLPQILYEDEDHDKVVLASDSDLTTAVEHA 471

Query: 530 RQVGMKGLRLHLDYL-XXXXXXXXXGSLDYAQKDAWATAYSSXXXXXXXXXXXXXXAYLR 354
           R  G+KGLRLHLDY            SLDYAQ DAWA+AYS+              AYLR
Sbjct: 472 RSAGLKGLRLHLDYTGTRRRRGSSSESLDYAQADAWASAYSAVAAGAALVAGLGVLAYLR 531

Query: 353 R 351
           R
Sbjct: 532 R 532


>gb|ABK94323.1| unknown [Populus trichocarpa]
          Length = 541

 Score =  147 bits (371), Expect = 2e-33
 Identities = 77/121 (63%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
 Frame = -1

Query: 710 RLHRFNCDTRSLTDLITSILQRMGDDIDRNQLPHILYEDEDNDKVVLASDGDLAAAVDHA 531
           R+HRF C+TRSLTDLITSILQR+GDDI+RN LP ILYEDED+DKVVLASD DL  AV+HA
Sbjct: 418 RMHRFTCETRSLTDLITSILQRLGDDINRNNLPQILYEDEDHDKVVLASDSDLTTAVEHA 477

Query: 530 RQVGMKGLRLHLDYL-XXXXXXXXXGSLDYAQKDAWATAYSSXXXXXXXXXXXXXXAYLR 354
           R  G+KGLRLHLDY            SLDYAQ DAWA+AYS+              AYLR
Sbjct: 478 RSAGLKGLRLHLDYTGTRRRRGSSSESLDYAQADAWASAYSAVAAGAALVAGLGVLAYLR 537

Query: 353 R 351
           R
Sbjct: 538 R 538


>ref|XP_002283958.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like isoform 1
           [Vitis vinifera]
          Length = 546

 Score =  143 bits (361), Expect = 3e-32
 Identities = 76/124 (61%), Positives = 88/124 (70%), Gaps = 2/124 (1%)
 Frame = -1

Query: 710 RLHRFNCDTRSLTDLITSILQRMGDDIDRNQLPHILYEDEDNDKVVLASDGDLAAAVDHA 531
           R+HRF CDTRSLTD+ITSILQR+GDDIDRN LP ILYEDED+DKVVLASD DL AA++HA
Sbjct: 422 RMHRFTCDTRSLTDVITSILQRVGDDIDRNNLPQILYEDEDHDKVVLASDNDLVAAMEHA 481

Query: 530 RQVGMKGLRLHLDY--LXXXXXXXXXGSLDYAQKDAWATAYSSXXXXXXXXXXXXXXAYL 357
           R  G KGLRLHLDY            G L+YAQ++AWA+AYS+              AYL
Sbjct: 482 RLAGWKGLRLHLDYSGTRPLRRDSGTGGLEYAQREAWASAYSAVAAGAAFVAGMGLLAYL 541

Query: 356 RRYS 345
           +R S
Sbjct: 542 KRSS 545


>ref|XP_003634219.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like isoform 2
           [Vitis vinifera] gi|297734436|emb|CBI15683.3| unnamed
           protein product [Vitis vinifera]
          Length = 541

 Score =  143 bits (361), Expect = 3e-32
 Identities = 76/124 (61%), Positives = 88/124 (70%), Gaps = 2/124 (1%)
 Frame = -1

Query: 710 RLHRFNCDTRSLTDLITSILQRMGDDIDRNQLPHILYEDEDNDKVVLASDGDLAAAVDHA 531
           R+HRF CDTRSLTD+ITSILQR+GDDIDRN LP ILYEDED+DKVVLASD DL AA++HA
Sbjct: 417 RMHRFTCDTRSLTDVITSILQRVGDDIDRNNLPQILYEDEDHDKVVLASDNDLVAAMEHA 476

Query: 530 RQVGMKGLRLHLDY--LXXXXXXXXXGSLDYAQKDAWATAYSSXXXXXXXXXXXXXXAYL 357
           R  G KGLRLHLDY            G L+YAQ++AWA+AYS+              AYL
Sbjct: 477 RLAGWKGLRLHLDYSGTRPLRRDSGTGGLEYAQREAWASAYSAVAAGAAFVAGMGLLAYL 536

Query: 356 RRYS 345
           +R S
Sbjct: 537 KRSS 540


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