BLASTX nr result

ID: Coptis21_contig00006400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006400
         (962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238508.1| uncharacterized protein LOC100305648 [Glycin...   244   3e-62
ref|XP_002279539.1| PREDICTED: probable signal peptidase complex...   239   9e-61
ref|NP_001238488.1| uncharacterized protein LOC100499695 [Glycin...   238   1e-60
gb|AFK49171.1| unknown [Lotus japonicus]                              236   5e-60
ref|XP_002315176.1| predicted protein [Populus trichocarpa] gi|1...   231   1e-58

>ref|NP_001238508.1| uncharacterized protein LOC100305648 [Glycine max]
           gi|255626189|gb|ACU13439.1| unknown [Glycine max]
          Length = 184

 Score =  244 bits (622), Expect = 3e-62
 Identities = 125/181 (69%), Positives = 136/181 (75%)
 Frame = -1

Query: 851 KTPKKANLLDQNAIKNTLDESISEIVKSRGYPEDVKLSNXXXXXXXXXXXXXXIAQFYPK 672
           K PKKANLLD ++IK+ LDES+SE+V SRGY EDV+LSN               AQFY K
Sbjct: 4   KVPKKANLLDHHSIKHILDESVSEVVTSRGYVEDVRLSNARLFIGAIIIVIALFAQFYKK 63

Query: 671 KFPENKDVLIACIVLYVIFNGLLQLVIYTKEKNAILFTLPPTGSFNSTGLVISSKLPRFS 492
           KFPEN+D LIACI LYVIFNGLLQL+IYTKEKNAILFT PP GSF STGLV+SSKLPRFS
Sbjct: 64  KFPENRDFLIACIALYVIFNGLLQLIIYTKEKNAILFTYPPVGSFTSTGLVVSSKLPRFS 123

Query: 491 DMYTLXXXXXXXXXXSAGKPVQFTKSVTKWFTKDGILVEGLFWKDVNGLINQYTGESSKN 312
           DMYTL          SA +PV FTKSVT+WFTKDGILVEGLFWKDV  LI QYT E  K 
Sbjct: 124 DMYTLTIASADPKSISANEPVHFTKSVTQWFTKDGILVEGLFWKDVEALIVQYTKEPKKG 183

Query: 311 K 309
           K
Sbjct: 184 K 184


>ref|XP_002279539.1| PREDICTED: probable signal peptidase complex subunit 2 isoform 1
           [Vitis vinifera] gi|296086093|emb|CBI31534.3| unnamed
           protein product [Vitis vinifera]
          Length = 195

 Score =  239 bits (609), Expect = 9e-61
 Identities = 123/195 (63%), Positives = 142/195 (72%), Gaps = 5/195 (2%)
 Frame = -1

Query: 878 MASTDISPKKTPKKANLLDQNAIKNTLDESISEIVKSRGYPEDVKLSNXXXXXXXXXXXX 699
           MAS + +  K PKKANLLD ++IK+ LDE +SEIV SRGY EDV++SN            
Sbjct: 1   MASNNNNSNKNPKKANLLDHHSIKHILDEYVSEIVTSRGYVEDVRMSNVRLLMGSIIIII 60

Query: 698 XXIAQFYPKKFPENKDVLIACIVLY-----VIFNGLLQLVIYTKEKNAILFTLPPTGSFN 534
             +AQFYPKKFPEN+D LI CI+LY     ++FNGLLQL+IYTKEKNAILFT PP G FN
Sbjct: 61  ALVAQFYPKKFPENRDFLIVCILLYPFCCYILFNGLLQLIIYTKEKNAILFTHPPEGFFN 120

Query: 533 STGLVISSKLPRFSDMYTLXXXXXXXXXXSAGKPVQFTKSVTKWFTKDGILVEGLFWKDV 354
           STGLV+SSKLPRFSD+YTL          +A  PV+FTKSVT+WFT DGILVEGLFWKDV
Sbjct: 121 STGLVVSSKLPRFSDLYTLSIASADPKSKAAKDPVEFTKSVTQWFTTDGILVEGLFWKDV 180

Query: 353 NGLINQYTGESSKNK 309
            GLIN Y  E  KNK
Sbjct: 181 EGLINDYAREPKKNK 195


>ref|NP_001238488.1| uncharacterized protein LOC100499695 [Glycine max]
           gi|255625849|gb|ACU13269.1| unknown [Glycine max]
          Length = 184

 Score =  238 bits (608), Expect = 1e-60
 Identities = 122/181 (67%), Positives = 135/181 (74%)
 Frame = -1

Query: 851 KTPKKANLLDQNAIKNTLDESISEIVKSRGYPEDVKLSNXXXXXXXXXXXXXXIAQFYPK 672
           K PKKANLLD ++IK+ LDES+SE+V SRG+ EDV+LSN               AQFY K
Sbjct: 4   KAPKKANLLDHHSIKHILDESVSEVVTSRGFVEDVRLSNVRLLIGAIIIVIALFAQFYKK 63

Query: 671 KFPENKDVLIACIVLYVIFNGLLQLVIYTKEKNAILFTLPPTGSFNSTGLVISSKLPRFS 492
           KFPEN+D LIACI LYVIFNGLLQL+IYTKEKNAILFT PP GSF STGLV+SSKLPRFS
Sbjct: 64  KFPENRDFLIACIALYVIFNGLLQLIIYTKEKNAILFTYPPVGSFTSTGLVVSSKLPRFS 123

Query: 491 DMYTLXXXXXXXXXXSAGKPVQFTKSVTKWFTKDGILVEGLFWKDVNGLINQYTGESSKN 312
           DMYTL          SA   V FTKSVT+WFTKDG+LVEGLFWKDV  LI QYT E  K+
Sbjct: 124 DMYTLTIAGADPKSISANDQVHFTKSVTQWFTKDGVLVEGLFWKDVEALIVQYTKEPKKS 183

Query: 311 K 309
           K
Sbjct: 184 K 184


>gb|AFK49171.1| unknown [Lotus japonicus]
          Length = 184

 Score =  236 bits (603), Expect = 5e-60
 Identities = 121/181 (66%), Positives = 135/181 (74%)
 Frame = -1

Query: 851 KTPKKANLLDQNAIKNTLDESISEIVKSRGYPEDVKLSNXXXXXXXXXXXXXXIAQFYPK 672
           K+ KKANLLD N+IK+ LDES+SEIV SRGY EDV+LSN               AQFY K
Sbjct: 4   KSLKKANLLDHNSIKHILDESVSEIVTSRGYVEDVRLSNVRLLVGTVIIVIALFAQFYKK 63

Query: 671 KFPENKDVLIACIVLYVIFNGLLQLVIYTKEKNAILFTLPPTGSFNSTGLVISSKLPRFS 492
           KFPEN+D L+ACI LYVIFNG+LQL+IYTKEKNAILFT PP GSF STGLV+SSKLPRFS
Sbjct: 64  KFPENRDFLLACIALYVIFNGVLQLIIYTKEKNAILFTYPPAGSFTSTGLVVSSKLPRFS 123

Query: 491 DMYTLXXXXXXXXXXSAGKPVQFTKSVTKWFTKDGILVEGLFWKDVNGLINQYTGESSKN 312
           DMYTL          SA +P   TKSVT+WFTKDG+LVEGLFWKDV  LI QYT E  K+
Sbjct: 124 DMYTLTIASADPKSISANEPKHLTKSVTQWFTKDGVLVEGLFWKDVEALIAQYTKEPKKS 183

Query: 311 K 309
           K
Sbjct: 184 K 184


>ref|XP_002315176.1| predicted protein [Populus trichocarpa] gi|118489054|gb|ABK96334.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222864216|gb|EEF01347.1| predicted protein [Populus
           trichocarpa]
          Length = 191

 Score =  231 bits (590), Expect = 1e-58
 Identities = 121/197 (61%), Positives = 142/197 (72%)
 Frame = -1

Query: 899 IEE*EEEMASTDISPKKTPKKANLLDQNAIKNTLDESISEIVKSRGYPEDVKLSNXXXXX 720
           ++E + EMA+      K PKKANLLD ++IK+ LDES+SEIV SRGY EDV++SN     
Sbjct: 1   MQEKKTEMAN------KKPKKANLLDHHSIKHILDESVSEIVTSRGYEEDVRMSNIRLFF 54

Query: 719 XXXXXXXXXIAQFYPKKFPENKDVLIACIVLYVIFNGLLQLVIYTKEKNAILFTLPPTGS 540
                     AQFY KKFP+N++ LI CIVLY++FNGLLQL+I+ KEKNAIL T PP GS
Sbjct: 55  GTIIIVIALFAQFYNKKFPQNREFLIGCIVLYIVFNGLLQLIIHLKEKNAILVTYPPKGS 114

Query: 539 FNSTGLVISSKLPRFSDMYTLXXXXXXXXXXSAGKPVQFTKSVTKWFTKDGILVEGLFWK 360
           F STGLV+SSKLPRFSD YTL          SAGKPVQFTKSVT+ FTKDG+LVEGLFWK
Sbjct: 115 FTSTGLVVSSKLPRFSDEYTLTIASADPKSISAGKPVQFTKSVTQCFTKDGVLVEGLFWK 174

Query: 359 DVNGLINQYTGESSKNK 309
           DV  LIN Y  E  K+K
Sbjct: 175 DVEALINDYAAEPKKSK 191


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