BLASTX nr result

ID: Coptis21_contig00006387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006387
         (1031 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]           241   3e-61
ref|XP_003599577.1| hypothetical protein MTR_3g035650 [Medicago ...   223   5e-56
ref|XP_003627937.1| hypothetical protein MTR_8g040260 [Medicago ...   187   5e-45
emb|CAK18872.1| hypothetical protein precursor [Phillyrea latifo...   168   2e-39
ref|YP_001312258.1| hypothetical protein CYtaCp093 [Cycas taitun...   144   5e-32

>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
          Length = 265

 Score =  241 bits (614), Expect = 3e-61
 Identities = 121/125 (96%), Positives = 121/125 (96%)
 Frame = +2

Query: 38  SPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFF 217
           SPGGILNALATALHGS RT PSIHRLRLGLLG LIPFAPLAFVSQCQCRPSRVLSPLVFF
Sbjct: 3   SPGGILNALATALHGSSRTTPSIHRLRLGLLGSLIPFAPLAFVSQCQCRPSRVLSPLVFF 62

Query: 218 PISAHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVL 397
           PIS HFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVL
Sbjct: 63  PISMHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVL 122

Query: 398 PRLLA 412
           PRLLA
Sbjct: 123 PRLLA 127



 Score = 73.9 bits (180), Expect(2) = 9e-15
 Identities = 37/52 (71%), Positives = 41/52 (78%)
 Frame = +1

Query: 505 AGTELADAYSPDTVIASSPGKEVHDPQAFYLHAALLRQAFAHCGKFPTAASR 660
           A + L    + +TVI SSP KEV DP AF+LHAALLRQAFAHCGKFPTAASR
Sbjct: 118 ASSVLPRLLAQNTVIVSSPRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASR 169



 Score = 33.1 bits (74), Expect(2) = 9e-15
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +3

Query: 756 VWLIILSDQLLIIALV 803
           VWLIILSDQLLIIALV
Sbjct: 179 VWLIILSDQLLIIALV 194



 Score = 73.6 bits (179), Expect = 8e-11
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = +1

Query: 928  VLTRYSPVRHWKHHFPSDLHVLSMPPAFILSQDR 1029
            VLTRYSPVRHWKHHFP DLHVLSMPPAFILSQD+
Sbjct: 194  VLTRYSPVRHWKHHFPFDLHVLSMPPAFILSQDQ 227


>ref|XP_003599577.1| hypothetical protein MTR_3g035650 [Medicago truncatula]
            gi|355488625|gb|AES69828.1| hypothetical protein
            MTR_3g035650 [Medicago truncatula]
          Length = 128

 Score =  223 bits (569), Expect = 5e-56
 Identities = 119/164 (72%), Positives = 121/164 (73%)
 Frame = +2

Query: 524  MLIPQIPSLLLLREKKFTTRRPSTSTRHCSVRLSPIAENSPLLPPVXXXXXXXXXXXXXX 703
            MLIP+IPSL LL+EKKF TRRP TSTRHCSVRLSPIAENSPL                  
Sbjct: 1    MLIPRIPSLFLLQEKKFMTRRPFTSTRHCSVRLSPIAENSPL------------------ 42

Query: 704  XXXXXXXXXXXXXXXXXSVADHPLGPATDHRLGKLLPHQLANQTRAPPRADSSFCSSAYG 883
                              VADHPLGPATDHRLGKLLPHQLANQTRAPP ADSSF SSAYG
Sbjct: 43   ------------------VADHPLGPATDHRLGKLLPHQLANQTRAPPWADSSFRSSAYG 84

Query: 884  VLAAVSSCCSPPKGRFLRVTHPSATGNTTSRPTCMC*ACRQRSS 1015
            VLAAVSSCCSPPKGRFLRVTHPSATGNTTSR TCMC ACRQRSS
Sbjct: 85   VLAAVSSCCSPPKGRFLRVTHPSATGNTTSRSTCMCKACRQRSS 128


>ref|XP_003627937.1| hypothetical protein MTR_8g040260 [Medicago truncatula]
            gi|355521959|gb|AET02413.1| hypothetical protein
            MTR_8g040260 [Medicago truncatula]
          Length = 241

 Score =  187 bits (474), Expect = 5e-45
 Identities = 100/151 (66%), Positives = 102/151 (67%)
 Frame = +2

Query: 563  EKKFTTRRPSTSTRHCSVRLSPIAENSPLLPPVXXXXXXXXXXXXXXXXXXXXXXXXXXX 742
            EKKF TRRP TSTRHCS+RLS IAENS L                               
Sbjct: 127  EKKFMTRRPFTSTRHCSIRLSRIAENSSL------------------------------- 155

Query: 743  XXXXSVADHPLGPATDHRLGKLLPHQLANQTRAPPRADSSFCSSAYGVLAAVSSCCSPPK 922
                 V DHPLGP TDH LGKLLPHQLANQTRAPP ADSSF SSAYGVLA VSSCCSPPK
Sbjct: 156  -----VDDHPLGPTTDHHLGKLLPHQLANQTRAPPWADSSFRSSAYGVLATVSSCCSPPK 210

Query: 923  GRFLRVTHPSATGNTTSRPTCMC*ACRQRSS 1015
            G+FLRVTHPSATGNTTSR  CMC ACRQRSS
Sbjct: 211  GKFLRVTHPSATGNTTSRSICMCKACRQRSS 241



 Score =  120 bits (302), Expect = 4e-25
 Identities = 67/104 (64%), Positives = 70/104 (67%)
 Frame = +1

Query: 103 YPSFTARTTGVSNPIRSPSFRLXXXXXXXXXXFAVGVLSDLCAFHRSTGNSLCPYRTPAW 282
           YPSFTARTT VSNPIRSPSFRL          FA+GV SDL AFH STGNSL        
Sbjct: 38  YPSFTARTTRVSNPIRSPSFRLSVLVSAQQSAFAIGVPSDLYAFHHSTGNSL-------- 89

Query: 283 QFPPPVQG*ALGFDGGLEKPPTDALRPIIPDNACILCLTAAAGT 414
                    +L FDG L+KPPTDALRPII DNACILCLTAAAGT
Sbjct: 90  ---------SLRFDGELKKPPTDALRPIISDNACILCLTAAAGT 124


>emb|CAK18872.1| hypothetical protein precursor [Phillyrea latifolia]
          Length = 84

 Score =  168 bits (426), Expect = 2e-39
 Identities = 82/83 (98%), Positives = 82/83 (98%)
 Frame = +2

Query: 35  YSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVF 214
           YSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVF
Sbjct: 2   YSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVF 61

Query: 215 FPISAHFTAPPEIPSAPTVLQLG 283
           FPIS HFTAPPEIPSAPTVLQLG
Sbjct: 62  FPISTHFTAPPEIPSAPTVLQLG 84


>ref|YP_001312258.1| hypothetical protein CYtaCp093 [Cycas taitungensis]
           gi|150251548|ref|YP_001312280.1| hypothetical protein
           CYtaCp115 [Cycas taitungensis]
           gi|452848925|ref|YP_007474603.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
           gi|452849010|ref|YP_007474689.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
           gi|149941576|dbj|BAF65000.1| hypothetical protein
           (chloroplast) [Cycas taitungensis]
           gi|149941598|dbj|BAF65022.1| hypothetical protein
           (chloroplast) [Cycas taitungensis]
           gi|372863080|gb|AEX99153.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
           gi|372863165|gb|AEX99238.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
          Length = 75

 Score =  144 bits (362), Expect = 5e-32
 Identities = 71/73 (97%), Positives = 72/73 (98%)
 Frame = +2

Query: 194 VLSPLVFFPISAHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFR 373
           +LSPLVFFPIS HFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFR
Sbjct: 1   MLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFR 60

Query: 374 ITLASSVLPRLLA 412
           ITLASSVLPRLLA
Sbjct: 61  ITLASSVLPRLLA 73


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