BLASTX nr result

ID: Coptis21_contig00006381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006381
         (1141 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15188.3| unnamed protein product [Vitis vinifera]              289   8e-76
ref|XP_002284602.1| PREDICTED: vesicle transport v-SNARE 13 [Vit...   289   8e-76
gb|ABB29948.1| vesicle transport v-SNARE 11-like [Solanum tubero...   282   1e-73
ref|XP_002530011.1| vesicle transport V-snare protein vti1a, put...   281   2e-73
gb|ABA40452.1| unknown [Solanum tuberosum]                            280   6e-73

>emb|CBI15188.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score =  289 bits (740), Expect = 8e-76
 Identities = 153/198 (77%), Positives = 168/198 (84%), Gaps = 2/198 (1%)
 Frame = +2

Query: 158 MSEVFEGYERQYCELSANLSKKCTSASLLDXXXXXXXXXXXXXXXXDAEALIRKMDLEAR 337
           MS+VFEGYERQYCELSANLS+KCT+ASLL+                DA+ALIRKMDLEAR
Sbjct: 59  MSQVFEGYERQYCELSANLSRKCTAASLLNGEQKKQKVSEIKAGLDDADALIRKMDLEAR 118

Query: 338 SLQPSVKAMLLAKLREYKSDLNNLKTEVKKVTSAS--QGSREELLESGLADTKMVSADQK 511
           SLQPSVKAMLLAKLREYK+DLNN+K EVK++TSA+  Q +R+ LLESG+ADT  VSADQK
Sbjct: 119 SLQPSVKAMLLAKLREYKTDLNNVKNEVKRITSANTNQAARDNLLESGMADTMTVSADQK 178

Query: 512 GRLLMSTERLNQSSDRIKESRRTMLETEELGVSILQDLHNQRQSLLHAGNTLHGVDDYIG 691
            RLLMST RLNQS DRIKESRRTMLETEELGVSILQDLH QRQSLLHA NTLHGVDD I 
Sbjct: 179 TRLLMSTGRLNQSGDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTLHGVDDNIS 238

Query: 692 KSKKVLTAMSRRMTRNKW 745
           KSKK+LTAMSRRM+RNKW
Sbjct: 239 KSKKILTAMSRRMSRNKW 256


>ref|XP_002284602.1| PREDICTED: vesicle transport v-SNARE 13 [Vitis vinifera]
          Length = 221

 Score =  289 bits (740), Expect = 8e-76
 Identities = 153/198 (77%), Positives = 168/198 (84%), Gaps = 2/198 (1%)
 Frame = +2

Query: 158 MSEVFEGYERQYCELSANLSKKCTSASLLDXXXXXXXXXXXXXXXXDAEALIRKMDLEAR 337
           MS+VFEGYERQYCELSANLS+KCT+ASLL+                DA+ALIRKMDLEAR
Sbjct: 1   MSQVFEGYERQYCELSANLSRKCTAASLLNGEQKKQKVSEIKAGLDDADALIRKMDLEAR 60

Query: 338 SLQPSVKAMLLAKLREYKSDLNNLKTEVKKVTSAS--QGSREELLESGLADTKMVSADQK 511
           SLQPSVKAMLLAKLREYK+DLNN+K EVK++TSA+  Q +R+ LLESG+ADT  VSADQK
Sbjct: 61  SLQPSVKAMLLAKLREYKTDLNNVKNEVKRITSANTNQAARDNLLESGMADTMTVSADQK 120

Query: 512 GRLLMSTERLNQSSDRIKESRRTMLETEELGVSILQDLHNQRQSLLHAGNTLHGVDDYIG 691
            RLLMST RLNQS DRIKESRRTMLETEELGVSILQDLH QRQSLLHA NTLHGVDD I 
Sbjct: 121 TRLLMSTGRLNQSGDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTLHGVDDNIS 180

Query: 692 KSKKVLTAMSRRMTRNKW 745
           KSKK+LTAMSRRM+RNKW
Sbjct: 181 KSKKILTAMSRRMSRNKW 198


>gb|ABB29948.1| vesicle transport v-SNARE 11-like [Solanum tuberosum]
          Length = 221

 Score =  282 bits (722), Expect = 1e-73
 Identities = 146/198 (73%), Positives = 168/198 (84%), Gaps = 2/198 (1%)
 Frame = +2

Query: 158 MSEVFEGYERQYCELSANLSKKCTSASLLDXXXXXXXXXXXXXXXXDAEALIRKMDLEAR 337
           MS+VFEGYERQYCELSANL+KKC SA++LD                DAEALIRKMDLEAR
Sbjct: 1   MSQVFEGYERQYCELSANLTKKCNSATILDGEQKKQKVSEIKAGLDDAEALIRKMDLEAR 60

Query: 338 SLQPSVKAMLLAKLREYKSDLNNLKTEVKKVTS--ASQGSREELLESGLADTKMVSADQK 511
           SL P+VKA LLAKLREYKSDLNNLKTEVK++TS  A+Q +R+ELLESG+AD  MVSADQ+
Sbjct: 61  SLPPNVKATLLAKLREYKSDLNNLKTEVKRITSGNANQAARDELLESGMADANMVSADQR 120

Query: 512 GRLLMSTERLNQSSDRIKESRRTMLETEELGVSILQDLHNQRQSLLHAGNTLHGVDDYIG 691
            RL+MSTERLN+SSDRI++SR+TMLETE+LGVSILQDLH QRQSLLHA +TLHGVDD I 
Sbjct: 121 QRLMMSTERLNRSSDRIRDSRKTMLETEDLGVSILQDLHQQRQSLLHAHDTLHGVDDNIS 180

Query: 692 KSKKVLTAMSRRMTRNKW 745
           +SKK+LT MSRRM+RNKW
Sbjct: 181 RSKKILTTMSRRMSRNKW 198


>ref|XP_002530011.1| vesicle transport V-snare protein vti1a, putative [Ricinus
           communis] gi|223530490|gb|EEF32373.1| vesicle transport
           V-snare protein vti1a, putative [Ricinus communis]
          Length = 220

 Score =  281 bits (720), Expect = 2e-73
 Identities = 147/198 (74%), Positives = 164/198 (82%), Gaps = 2/198 (1%)
 Frame = +2

Query: 158 MSEVFEGYERQYCELSANLSKKCTSASLLDXXXXXXXXXXXXXXXXDAEALIRKMDLEAR 337
           MSEVFEGYERQYCELSANLS+KCT+A  LD                DAE+LIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANLSRKCTTAGALDGEQKKQKLSEVKAGLEDAESLIRKMDLEAR 60

Query: 338 SLQPSVKAMLLAKLREYKSDLNNLKTEVKKVTSASQGS--REELLESGLADTKMVSADQK 511
           SLQP+VKA+LLAKLREYKSDLNNLK+EVK++ S +  S  R+ELLESG+AD    SADQ+
Sbjct: 61  SLQPNVKAVLLAKLREYKSDLNNLKSEVKRIASGNLNSAARDELLESGMADALTASADQR 120

Query: 512 GRLLMSTERLNQSSDRIKESRRTMLETEELGVSILQDLHNQRQSLLHAGNTLHGVDDYIG 691
            RL+M+TERLN SSDR+K+SRRTMLETEELGVSILQDLH QRQSLLHA NTLHGVDD IG
Sbjct: 121 SRLMMTTERLNHSSDRVKDSRRTMLETEELGVSILQDLHQQRQSLLHAHNTLHGVDDNIG 180

Query: 692 KSKKVLTAMSRRMTRNKW 745
           KSKKVLTAM+RRM RNKW
Sbjct: 181 KSKKVLTAMARRMNRNKW 198


>gb|ABA40452.1| unknown [Solanum tuberosum]
          Length = 221

 Score =  280 bits (715), Expect = 6e-73
 Identities = 145/198 (73%), Positives = 167/198 (84%), Gaps = 2/198 (1%)
 Frame = +2

Query: 158 MSEVFEGYERQYCELSANLSKKCTSASLLDXXXXXXXXXXXXXXXXDAEALIRKMDLEAR 337
           MS+VFEGYERQYCELSANL+KKC SA++LD                DAEALIRKMDLEAR
Sbjct: 1   MSQVFEGYERQYCELSANLTKKCNSATILDGEQKKQKVSEIKAGLDDAEALIRKMDLEAR 60

Query: 338 SLQPSVKAMLLAKLREYKSDLNNLKTEVKKVTS--ASQGSREELLESGLADTKMVSADQK 511
           SL P+VKA LLAKLREYKSDLNNLKTEVK++TS  A+Q +R+ELLESG+AD  MVSADQ+
Sbjct: 61  SLPPNVKATLLAKLREYKSDLNNLKTEVKRITSGNANQAARDELLESGMADANMVSADQR 120

Query: 512 GRLLMSTERLNQSSDRIKESRRTMLETEELGVSILQDLHNQRQSLLHAGNTLHGVDDYIG 691
            RL+MSTERLN+SS RI++SR+TMLETE+LGVSILQDLH QRQSLLHA +TLHGVDD I 
Sbjct: 121 QRLMMSTERLNRSSGRIRDSRKTMLETEDLGVSILQDLHQQRQSLLHAHDTLHGVDDNIS 180

Query: 692 KSKKVLTAMSRRMTRNKW 745
           +SKK+LT MSRRM+RNKW
Sbjct: 181 RSKKILTTMSRRMSRNKW 198


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