BLASTX nr result

ID: Coptis21_contig00006379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006379
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526938.1| hypothetical protein RCOM_0530890 [Ricinus c...   196   5e-48
ref|XP_002268221.1| PREDICTED: uncharacterized protein LOC100256...   162   6e-38
gb|ADC68622.1| hypothetical protein [Solanum lycopersicum] gi|36...   159   9e-37
ref|XP_002300083.1| predicted protein [Populus trichocarpa] gi|2...   153   5e-35
ref|XP_002870685.1| hypothetical protein ARALYDRAFT_493913 [Arab...   145   1e-32

>ref|XP_002526938.1| hypothetical protein RCOM_0530890 [Ricinus communis]
           gi|223533690|gb|EEF35425.1| hypothetical protein
           RCOM_0530890 [Ricinus communis]
          Length = 180

 Score =  196 bits (498), Expect = 5e-48
 Identities = 96/180 (53%), Positives = 120/180 (66%), Gaps = 1/180 (0%)
 Frame = +2

Query: 29  MKREGRQHGMVRTCMILPSPLNPRPNSRVVNEFETQPTAGQYTKVSSKPTNHSKFTGKCG 208
           MKREGRQHGMVRTC ILPSP NPRP+SR +N F++ PTAG +TKV  +PTNHSKFTGKCG
Sbjct: 1   MKREGRQHGMVRTCRILPSPWNPRPDSRFINRFDSPPTAGLFTKVLPRPTNHSKFTGKCG 60

Query: 209 KSKCEGCHTHPVCKSKSKAKGAQKLKSSDVEKNHQLIAWRVVDKGNNLNFIGKSGKELLR 388
           K +C GCH HP CKSK K KG QKLKS DV  N++L++WRVVD    LNF G S   +L 
Sbjct: 61  KPRCNGCHMHPSCKSKDKTKGTQKLKSHDVLSNYRLMSWRVVDGKPGLNFSGFSASRILD 120

Query: 389 NMSNDYMXXXXXXXXXXXXXXSPALTRNEVEEGIRVMDFYDVGFVMEHVE-DEDWCIVGE 565
           +M +D                      +++++G     + DVGF+++ VE DEDWC+V E
Sbjct: 121 HMDDDERYVDDDDYEETIAANVDDGDDDDIDDGDDT-SYCDVGFLLDQVEGDEDWCLVAE 179


>ref|XP_002268221.1| PREDICTED: uncharacterized protein LOC100256024 [Vitis vinifera]
          Length = 218

 Score =  162 bits (411), Expect = 6e-38
 Identities = 93/217 (42%), Positives = 114/217 (52%), Gaps = 38/217 (17%)
 Frame = +2

Query: 29  MKREGRQHGMVRTCMILPSPLNPRPNSRVVNEFETQPTAGQYTKVSSKPTNHSKFTGKCG 208
           MKREGRQHGMVR+  ILP P NP    R VN F++ PTAG +TKVSSKPTNHSKFTG C 
Sbjct: 1   MKREGRQHGMVRSYRILPPPWNPNSQERFVNRFDSPPTAGVFTKVSSKPTNHSKFTGACC 60

Query: 209 KSKCEGCHTHPVCKSKSKAKGAQKLKSSDVEKNHQLIAWRVVDKGNNLNFIGKSGKELLR 388
           ++KC  CH  P CKSK K KG QK+K  D+  NH+LI WR+V+    LNF G S  E+L 
Sbjct: 61  RTKCLDCHLLPACKSKGKTKGTQKMKPRDMVSNHRLITWRLVEGKPGLNFNGISATEVLD 120

Query: 389 NMSND-----------------------YMXXXXXXXXXXXXXXSPALTRNEVEE-GIRV 496
           ++S +                       Y                P     E+E  GI++
Sbjct: 121 HLSREDFYDDQYYNDEDEDEVEACYDGHYDEEKIEDSGHACPDDGPMAEEKEIEAGGIQI 180

Query: 497 M-------------DFYDVGFVMEHVE-DEDWCIVGE 565
                          FY+VGFV E V+ DE WC+V E
Sbjct: 181 SGESDECDVDDDDNSFYEVGFVWEQVDGDEGWCLVRE 217


>gb|ADC68622.1| hypothetical protein [Solanum lycopersicum]
           gi|365222884|gb|AEW69794.1| Hop-interacting protein
           THI031 [Solanum lycopersicum]
          Length = 191

 Score =  159 bits (401), Expect = 9e-37
 Identities = 90/191 (47%), Positives = 108/191 (56%), Gaps = 14/191 (7%)
 Frame = +2

Query: 29  MKREGRQHGMVRTCMILPSPLNPRPNSRVVNEFETQPTAGQYTKVSSKPTNHSKFTGKCG 208
           M+REGRQHGMVRT  ILPSP NPRP  R +N+  + PTAG + KV +KP+NHSKFTGKCG
Sbjct: 1   MRREGRQHGMVRTYPILPSPWNPRPEPRYMNKSNSPPTAGLFAKVPTKPSNHSKFTGKCG 60

Query: 209 KSKCEGCHTHPVCKSKSKAKGAQKLKS-SDVEKNHQLIAWRVVDKGNNLNFIGKSGKELL 385
           + +C  CH HP  KSK K KG QKLK   DV     L+ WRVVD     NF G S   +L
Sbjct: 61  RPRCTSCHVHPAAKSKDKTKGTQKLKGCGDVV---SLVTWRVVDARPGFNFSGFSATGIL 117

Query: 386 RNMSND---YM---------XXXXXXXXXXXXXXSPALTRNEVEEGIRVMDFYDVGFVME 529
            ++ +D   YM                       SPA+     +     M F +VGFV E
Sbjct: 118 DHLDSDSSYYMDHEIYYDEDYGYGDQELVVDSDGSPAIGVEIEDNDEEKMSFCEVGFVWE 177

Query: 530 HV-EDEDWCIV 559
            V EDEDWC+V
Sbjct: 178 DVEEDEDWCVV 188


>ref|XP_002300083.1| predicted protein [Populus trichocarpa] gi|222847341|gb|EEE84888.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  153 bits (386), Expect = 5e-35
 Identities = 85/195 (43%), Positives = 111/195 (56%), Gaps = 16/195 (8%)
 Frame = +2

Query: 29  MKREGRQHGMVRTCMILPSPLNPRPNS-RVVNEFETQPTAGQYTKVSSKPTNHSKFTGKC 205
           M+REGR HGMVR   +LP P NP+P   R  N+F+T  TAG +TKVSSKPTNHSKFTGKC
Sbjct: 1   MRREGRPHGMVRAYAVLPPPWNPKPGGDRKFNKFDTPTTAGLFTKVSSKPTNHSKFTGKC 60

Query: 206 GKSKCEGCHTHPVCKSKSKAKGAQKLKSSDV--EKNHQLIAWRVVDKGNNLNFIGKSGKE 379
           GK +C  CH  P CK+K K KG+ K+KS DV    N Q IAWRVV+  +  N  G S   
Sbjct: 61  GKPRCLECHLQPCCKAKHKTKGSHKVKSQDVLSNSNAQFIAWRVVNGRHGSNLSGFSATG 120

Query: 380 LLRNMS----NDYMXXXXXXXXXXXXXXSPALTRNEVEEGIRV--------MDFYDVGFV 523
           +L +++    +D+                     N + +G+ +        M + DVGF 
Sbjct: 121 MLNHLASTGDHDHADEVDDSGHENDQEFVDDDDENYIGDGVNIKNIEEEDGMSYCDVGFE 180

Query: 524 MEHVE-DEDWCIVGE 565
           ++  E DEDWC+V E
Sbjct: 181 VDLAEGDEDWCLVAE 195


>ref|XP_002870685.1| hypothetical protein ARALYDRAFT_493913 [Arabidopsis lyrata subsp.
           lyrata] gi|297316521|gb|EFH46944.1| hypothetical protein
           ARALYDRAFT_493913 [Arabidopsis lyrata subsp. lyrata]
          Length = 213

 Score =  145 bits (365), Expect = 1e-32
 Identities = 70/128 (54%), Positives = 93/128 (72%), Gaps = 2/128 (1%)
 Frame = +2

Query: 29  MKREGRQHGMVRTCMILPSPLNPRPNSRVVNEFETQPTAGQYTKVSSKPTNHSKFTGKCG 208
           MKREG+QHGMVRT  ILP  LNPRP S++VN   ++PTAG +TKV+SKPTNHSKFTGKCG
Sbjct: 1   MKREGKQHGMVRTYRILPPSLNPRPESKLVNPLTSRPTAGLFTKVTSKPTNHSKFTGKCG 60

Query: 209 KSKCEGCHTHPVCKSKSKAKGAQKLKSSDVEKNHQLIAWRVVDKG--NNLNFIGKSGKEL 382
           +++C  CH HP+ KSK+K KG+ K++S+DV   ++++ W+V   G    L   G S   +
Sbjct: 61  QARCLDCHMHPITKSKAKTKGSSKVRSNDV--TYKMLTWQVAAGGPRPGLKLSGFSATGI 118

Query: 383 LRNMSNDY 406
           L  MS+DY
Sbjct: 119 LDLMSDDY 126


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