BLASTX nr result

ID: Coptis21_contig00006369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006369
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237351.1| uncharacterized protein LOC100306601 [Glycin...   174   3e-41
ref|XP_002268262.1| PREDICTED: thioredoxin X, chloroplastic [Vit...   173   4e-41
ref|NP_001236422.1| uncharacterized protein LOC100500584 [Glycin...   172   8e-41
ref|XP_003633059.1| PREDICTED: LOW QUALITY PROTEIN: thioredoxin ...   169   7e-40
gb|AFK48874.1| unknown [Medicago truncatula]                          168   1e-39

>ref|NP_001237351.1| uncharacterized protein LOC100306601 [Glycine max]
           gi|255629033|gb|ACU14861.1| unknown [Glycine max]
          Length = 198

 Score =  174 bits (440), Expect = 3e-41
 Identities = 95/188 (50%), Positives = 127/188 (67%), Gaps = 10/188 (5%)
 Frame = +2

Query: 119 MSIIPTSFHSSMLSIPTTP-SAYTLHKPHYTCSIFKTNHSLLPFRNQLKSRFQQCP---- 283
           +S  P +  +  LS+P  P    T+     T S     HS      Q  S  +  P    
Sbjct: 11  LSFHPENMDAMTLSLPLPPVPVCTVPASASTSSSVSLTHSWSATARQRLSSHRTRPIFRN 70

Query: 284 ---SLQKVNSITCG--VTLIDQTQFSETVLKSDVPVLVEFVAEWCGPCRLIAPAIEWASQ 448
              ++ K+  +TCG  VT I++TQF +TVLK++ PVLVEFVA WCGPCRLI+P++E  ++
Sbjct: 71  YSSAVPKLTVVTCGAAVTEINETQFKDTVLKANRPVLVEFVATWCGPCRLISPSMESLAK 130

Query: 449 EYKDKLKVVKIDHDSNPQLIEEYRVYGLPALTLFHKGKEIGESRREGAMTKVKLKEYLDG 628
           EY+D+L VVKIDHD+NP+LIEEY+VYGLP L LF  G+E+ ESRREGA+TKVKLKEY+D 
Sbjct: 131 EYEDRLTVVKIDHDANPRLIEEYKVYGLPTLILFKNGQEVPESRREGAITKVKLKEYVDA 190

Query: 629 VLESIAVA 652
           +LESI+V+
Sbjct: 191 LLESISVS 198


>ref|XP_002268262.1| PREDICTED: thioredoxin X, chloroplastic [Vitis vinifera]
          Length = 176

 Score =  173 bits (439), Expect = 4e-41
 Identities = 94/172 (54%), Positives = 124/172 (72%), Gaps = 2/172 (1%)
 Frame = +2

Query: 143 HSSMLSIPTTPSAYTLHKPH-YTCSIFKTNHSLLPFRNQLKSRFQQCPSLQKVNSITCGV 319
           +S  +S+ + P    +  P     S F    +L   R+Q K  F+ C  +++  ++TCGV
Sbjct: 7   NSMPISVSSLPPVRVVASPRKLEFSSFTPKTTLFGSRSQRKIGFR-CSPVRRA-AVTCGV 64

Query: 320 -TLIDQTQFSETVLKSDVPVLVEFVAEWCGPCRLIAPAIEWASQEYKDKLKVVKIDHDSN 496
            T I ++QFS+ VLK+D PVLVEFVA WCGPCRLI+PA+E  +QEY D+L VVKIDHD+N
Sbjct: 65  VTEIKESQFSDVVLKADEPVLVEFVATWCGPCRLISPAMEAIAQEYGDRLTVVKIDHDAN 124

Query: 497 PQLIEEYRVYGLPALTLFHKGKEIGESRREGAMTKVKLKEYLDGVLESIAVA 652
           P+LIEEY+VYGLP L LF  G+E+ ESRREGA+TK KLKEY+D +LESI+VA
Sbjct: 125 PRLIEEYKVYGLPTLILFKNGQEVPESRREGAITKGKLKEYVDALLESISVA 176


>ref|NP_001236422.1| uncharacterized protein LOC100500584 [Glycine max]
           gi|255630681|gb|ACU15700.1| unknown [Glycine max]
          Length = 181

 Score =  172 bits (436), Expect = 8e-41
 Identities = 95/183 (51%), Positives = 127/183 (69%), Gaps = 5/183 (2%)
 Frame = +2

Query: 119 MSIIPTSFHSSMLSIPTTPSAYTLHKPHYTCSI---FKTNHSLLPFRNQLKSRFQQCPSL 289
           +S+ P    +   S  T+ S    H   Y+CS      ++ + L FRN   +     P L
Sbjct: 9   LSLPPVPVRTVSASASTSSSVPLTHS--YSCSARQRLSSHRTRLSFRNHSSA----VPKL 62

Query: 290 QKVNSITCG--VTLIDQTQFSETVLKSDVPVLVEFVAEWCGPCRLIAPAIEWASQEYKDK 463
               ++TCG  VT I++TQF +TVLK++ PVLVEFVA WCGPCRLI+ A+E  ++EY+D+
Sbjct: 63  ----TVTCGAAVTEINETQFKDTVLKANRPVLVEFVATWCGPCRLISSAMESLAKEYEDR 118

Query: 464 LKVVKIDHDSNPQLIEEYRVYGLPALTLFHKGKEIGESRREGAMTKVKLKEYLDGVLESI 643
           L VVKIDHD+NPQLIEEY+VYGLP L LF  G+E+ ESRREGA+TK+KLKEY+D +LESI
Sbjct: 119 LTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYVDALLESI 178

Query: 644 AVA 652
           +V+
Sbjct: 179 SVS 181


>ref|XP_003633059.1| PREDICTED: LOW QUALITY PROTEIN: thioredoxin X, chloroplastic-like
           [Vitis vinifera]
          Length = 175

 Score =  169 bits (428), Expect = 7e-40
 Identities = 95/178 (53%), Positives = 124/178 (69%), Gaps = 1/178 (0%)
 Frame = +2

Query: 122 SIIPTSFHSSMLSIPTTPSAYTLHKPHYTCSIFKTNHSLLPFRNQLKSRFQQCPSLQKVN 301
           +I+  S   S+ S+P   +  +  K  +  S F    +L   R+Q K  F+  P   +  
Sbjct: 3   TILSNSMPISVSSLPPVRAVPSPRKLEF--SSFTPKTTLFGSRSQRKLGFRCSP---RRA 57

Query: 302 SITCG-VTLIDQTQFSETVLKSDVPVLVEFVAEWCGPCRLIAPAIEWASQEYKDKLKVVK 478
           ++TCG VT I ++QFS+ VLK+D PVLVEFVA WCGPCRLI+ A+E  + EY D+L VVK
Sbjct: 58  AVTCGGVTEIKESQFSDVVLKADGPVLVEFVATWCGPCRLISLAMEAIAXEYGDRLTVVK 117

Query: 479 IDHDSNPQLIEEYRVYGLPALTLFHKGKEIGESRREGAMTKVKLKEYLDGVLESIAVA 652
           IDHD+NPQLIEEY+VYGLP L LF  G+E+ ESRREGA+TK KLKEY+D +LESI+VA
Sbjct: 118 IDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKGKLKEYVDALLESISVA 175


>gb|AFK48874.1| unknown [Medicago truncatula]
          Length = 181

 Score =  168 bits (426), Expect = 1e-39
 Identities = 92/186 (49%), Positives = 124/186 (66%), Gaps = 9/186 (4%)
 Frame = +2

Query: 119 MSIIPTSFHSSMLSIPTTPSAYTLHKPHYTCSIFKTNHSLLPFRNQLKSRFQQCPSLQKV 298
           M  + ++  S  L++PT P          T SI  ++   LP  ++ +  + Q  S    
Sbjct: 1   MDTVTSTSASLTLTLPTLPVRTI------TASISVSSSLPLPRSHRQQRLYSQKRSFSNS 54

Query: 299 NS---------ITCGVTLIDQTQFSETVLKSDVPVLVEFVAEWCGPCRLIAPAIEWASQE 451
           +S         ++CG+T I+++QF+ TVLKS+ PVLVEFVA WCGPCRLI PA+E  +QE
Sbjct: 55  SSSSVAVPRFTVSCGITEINESQFNVTVLKSERPVLVEFVATWCGPCRLITPAMESIAQE 114

Query: 452 YKDKLKVVKIDHDSNPQLIEEYRVYGLPALTLFHKGKEIGESRREGAMTKVKLKEYLDGV 631
           Y D+L VVKIDHD+NPQLIEEY+VYGLP L LF  G+E   SR+EGA+TKVKLK++LD +
Sbjct: 115 YADRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGEEFPGSRKEGAITKVKLKQHLDAL 174

Query: 632 LESIAV 649
           LESI+V
Sbjct: 175 LESISV 180


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