BLASTX nr result

ID: Coptis21_contig00006362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006362
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24060.3| unnamed protein product [Vitis vinifera]              124   2e-26
ref|XP_002265949.1| PREDICTED: uncharacterized protein LOC100244...   124   2e-26
ref|XP_004172869.1| PREDICTED: uncharacterized LOC101216928 [Cuc...   120   1e-25
ref|XP_004152859.1| PREDICTED: uncharacterized protein LOC101216...   120   1e-25
ref|XP_002331407.1| predicted protein [Populus trichocarpa] gi|2...    99   6e-19

>emb|CBI24060.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score =  124 bits (310), Expect = 2e-26
 Identities = 86/194 (44%), Positives = 114/194 (58%), Gaps = 33/194 (17%)
 Frame = -2

Query: 484 RPSINLSLFTN--------FSDENGSNNSSKSPRNFEYGVVGLGIVAAMND---AHQDVI 338
           R ++NLSLFTN        +S ++  ++++KSPRNFE GVVGLGIVAA+ND    H+ + 
Sbjct: 64  RLAMNLSLFTNSFEPKSQVWSLDSKVSSTTKSPRNFEGGVVGLGIVAALNDLDNTHESLS 123

Query: 337 SS-VKTTKLDKMS-KSEPIPIV---LSKPVVEK--------DEVMELSESYTCVVSHLGH 197
           S   K + L   S +S PIPI       P VEK        +  ME+SESYTCV+SH G+
Sbjct: 124 SKPCKASILAATSPRSNPIPIANRAKHMPKVEKCRPSSGMMEMEMEMSESYTCVISHCGN 183

Query: 196 G--RKKEYFDDERIWGKSGYRGGVFFTSPLKDT-------GEGIMLFPSADFLTSCYLCK 44
              +K+ YFDD+     +G    +    P+  T        E    F +ADFL+SCYLC+
Sbjct: 184 NLIKKRVYFDDK----PNGVVDDITTAVPISSTDAAYWVASEAAPPFKTADFLSSCYLCQ 239

Query: 43  KKLHGLDIFMYRGD 2
           KKLHGLDIFMYRG+
Sbjct: 240 KKLHGLDIFMYRGE 253


>ref|XP_002265949.1| PREDICTED: uncharacterized protein LOC100244902 isoform 1 [Vitis
           vinifera]
          Length = 267

 Score =  124 bits (310), Expect = 2e-26
 Identities = 86/194 (44%), Positives = 114/194 (58%), Gaps = 33/194 (17%)
 Frame = -2

Query: 484 RPSINLSLFTN--------FSDENGSNNSSKSPRNFEYGVVGLGIVAAMND---AHQDVI 338
           R ++NLSLFTN        +S ++  ++++KSPRNFE GVVGLGIVAA+ND    H+ + 
Sbjct: 28  RLAMNLSLFTNSFEPKSQVWSLDSKVSSTTKSPRNFEGGVVGLGIVAALNDLDNTHESLS 87

Query: 337 SS-VKTTKLDKMS-KSEPIPIV---LSKPVVEK--------DEVMELSESYTCVVSHLGH 197
           S   K + L   S +S PIPI       P VEK        +  ME+SESYTCV+SH G+
Sbjct: 88  SKPCKASILAATSPRSNPIPIANRAKHMPKVEKCRPSSGMMEMEMEMSESYTCVISHCGN 147

Query: 196 G--RKKEYFDDERIWGKSGYRGGVFFTSPLKDT-------GEGIMLFPSADFLTSCYLCK 44
              +K+ YFDD+     +G    +    P+  T        E    F +ADFL+SCYLC+
Sbjct: 148 NLIKKRVYFDDK----PNGVVDDITTAVPISSTDAAYWVASEAAPPFKTADFLSSCYLCQ 203

Query: 43  KKLHGLDIFMYRGD 2
           KKLHGLDIFMYRG+
Sbjct: 204 KKLHGLDIFMYRGE 217


>ref|XP_004172869.1| PREDICTED: uncharacterized LOC101216928 [Cucumis sativus]
          Length = 236

 Score =  120 bits (302), Expect = 1e-25
 Identities = 87/184 (47%), Positives = 113/184 (61%), Gaps = 22/184 (11%)
 Frame = -2

Query: 487 KRPSINLSLFTNFSDENGSNNSSKSPRNFEYGVVGLGIVAAMNDA---HQDVISSVKTTK 317
           ++P+I +SLFT  S  + S++ +KSPR+FE GVVGLGIVAAM D+   H+  +SS   + 
Sbjct: 8   RKPTIGISLFTALSG-SFSSDKTKSPRDFEKGVVGLGIVAAMTDSDKIHEAFVSSKAVSP 66

Query: 316 LDKMSKSEPIPIVLS-KPV--------VEKDE----VMELSESYTCVVSHLGHG--RKKE 182
                +S  IPIV S KP         +EK+     V ELSESYTCV SH G+    K+ 
Sbjct: 67  -----RSCSIPIVSSAKPAANFRGGFNLEKETLPEVVDELSESYTCVTSHFGNRLFEKRV 121

Query: 181 YFDDER--IWGKSG--YRGGVFFTSPLKDTGEGIMLFPSADFLTSCYLCKKKLHGLDIFM 14
           YF+ E   + G+S    R GVF TSP+   G     F +A+FL+SCYLC K LHGLDIFM
Sbjct: 122 YFNGELDLVNGRSSNIVRSGVFSTSPMS-FGVAERGFCAAEFLSSCYLCSKHLHGLDIFM 180

Query: 13  YRGD 2
           YRG+
Sbjct: 181 YRGE 184


>ref|XP_004152859.1| PREDICTED: uncharacterized protein LOC101216928 [Cucumis sativus]
          Length = 234

 Score =  120 bits (302), Expect = 1e-25
 Identities = 87/184 (47%), Positives = 113/184 (61%), Gaps = 22/184 (11%)
 Frame = -2

Query: 487 KRPSINLSLFTNFSDENGSNNSSKSPRNFEYGVVGLGIVAAMNDA---HQDVISSVKTTK 317
           ++P+I +SLFT  S  + S++ +KSPR+FE GVVGLGIVAAM D+   H+  +SS   + 
Sbjct: 8   RKPTIGISLFTALSG-SFSSDKTKSPRDFEKGVVGLGIVAAMTDSDKIHEAFVSSKAVSP 66

Query: 316 LDKMSKSEPIPIVLS-KPV--------VEKDE----VMELSESYTCVVSHLGHG--RKKE 182
                +S  IPIV S KP         +EK+     V ELSESYTCV SH G+    K+ 
Sbjct: 67  -----RSCSIPIVSSAKPAANFRGGFNLEKETLPEVVDELSESYTCVTSHFGNRLFEKRV 121

Query: 181 YFDDER--IWGKSG--YRGGVFFTSPLKDTGEGIMLFPSADFLTSCYLCKKKLHGLDIFM 14
           YF+ E   + G+S    R GVF TSP+   G     F +A+FL+SCYLC K LHGLDIFM
Sbjct: 122 YFNGELDLVNGRSSNIVRSGVFSTSPMS-FGVAERGFCAAEFLSSCYLCSKHLHGLDIFM 180

Query: 13  YRGD 2
           YRG+
Sbjct: 181 YRGE 184


>ref|XP_002331407.1| predicted protein [Populus trichocarpa] gi|222873621|gb|EEF10752.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 76/190 (40%), Positives = 98/190 (51%), Gaps = 28/190 (14%)
 Frame = -2

Query: 487 KRPSINLSLFTNFSDENGSNNSSKSPRNFEYG--VVGLGIVAAMNDAHQDVISSVKTTKL 314
           KRP I+LSLFT  ++     N  KSPRNF+ G   VGLGIVAAM++       S K +  
Sbjct: 4   KRPRISLSLFTTLTETFSMAN--KSPRNFKNGGSAVGLGIVAAMDE-------SDKVSDF 54

Query: 313 DKMSKSEPIPIV-LSKPV------------VEKDEVM--ELSESYTCVVSHLGHG--RKK 185
               +S P+P+V L KP              +K  V+  E  ESYTCV+SH+G+   +K 
Sbjct: 55  ALSPRSSPVPVVSLKKPASCFKEGGIGVWNFDKGGVVVDENDESYTCVISHVGNNVIKKS 114

Query: 184 EYFDDERI-----WGKSG----YRGGVFFTSPLKDTGEGIMLFPSADFLTSCYLCKKKLH 32
            Y+DD+       W   G    Y        P+         F S DFL+SC+LCKK L 
Sbjct: 115 VYYDDKVCVDSVSWFDVGSGLLYAASPAVMMPIDVATAERREFWSKDFLSSCHLCKKLLE 174

Query: 31  GLDIFMYRGD 2
           GLDIFMYRG+
Sbjct: 175 GLDIFMYRGE 184


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