BLASTX nr result

ID: Coptis21_contig00006358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006358
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313041.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002524173.1| conserved hypothetical protein [Ricinus comm...    67   1e-09
ref|NP_565742.1| putative transmembrane protein 97 [Arabidopsis ...    66   3e-09
ref|XP_002889539.1| hypothetical protein ARALYDRAFT_470516 [Arab...    66   3e-09
ref|XP_002881222.1| hypothetical protein ARALYDRAFT_482166 [Arab...    65   8e-09

>ref|XP_002313041.1| predicted protein [Populus trichocarpa] gi|222849449|gb|EEE86996.1|
           predicted protein [Populus trichocarpa]
          Length = 145

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/53 (67%), Positives = 42/53 (79%)
 Frame = -1

Query: 312 GVSTFTSMVAILSELLGSQKASDKLLMVYGPFLGVAVIAVLRGLVPASKKTSG 154
           G S  TSMVAIL+ELLGS KASD LLM+Y PFLG+ V+ +LRGL+  S KTSG
Sbjct: 93  GSSALTSMVAILAELLGSGKASDDLLMMYSPFLGLGVLCILRGLIQNSSKTSG 145


>ref|XP_002524173.1| conserved hypothetical protein [Ricinus communis]
           gi|223536542|gb|EEF38188.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 161

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/52 (59%), Positives = 43/52 (82%)
 Frame = -1

Query: 312 GVSTFTSMVAILSELLGSQKASDKLLMVYGPFLGVAVIAVLRGLVPASKKTS 157
           G S FTSMVAI++EL+GS +ASDKL+M++ P LG+ ++A+LRGLVP S  T+
Sbjct: 101 GTSIFTSMVAIVAELIGSGRASDKLMMIHAPCLGIGLLAILRGLVPHSGNTA 152


>ref|NP_565742.1| putative transmembrane protein 97 [Arabidopsis thaliana]
           gi|3831458|gb|AAC69940.1| expressed protein [Arabidopsis
           thaliana] gi|21618093|gb|AAM67143.1| unknown
           [Arabidopsis thaliana] gi|28466853|gb|AAO44035.1|
           At2g32380 [Arabidopsis thaliana]
           gi|110736581|dbj|BAF00256.1| hypothetical protein
           [Arabidopsis thaliana] gi|330253581|gb|AEC08675.1|
           putative transmembrane protein 97 [Arabidopsis thaliana]
          Length = 168

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/53 (58%), Positives = 41/53 (77%)
 Frame = -1

Query: 312 GVSTFTSMVAILSELLGSQKASDKLLMVYGPFLGVAVIAVLRGLVPASKKTSG 154
           G S  TSM AIL E++GS KAS+KLLM+Y PF+GV ++A+LRGL+  S K+ G
Sbjct: 101 GASVVTSMAAILGEMIGSGKASEKLLMMYVPFMGVGILALLRGLLSQSNKSGG 153


>ref|XP_002889539.1| hypothetical protein ARALYDRAFT_470516 [Arabidopsis lyrata subsp.
           lyrata] gi|297335381|gb|EFH65798.1| hypothetical protein
           ARALYDRAFT_470516 [Arabidopsis lyrata subsp. lyrata]
          Length = 168

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/54 (59%), Positives = 41/54 (75%)
 Frame = -1

Query: 312 GVSTFTSMVAILSELLGSQKASDKLLMVYGPFLGVAVIAVLRGLVPASKKTSGT 151
           G S  TSM AIL E++GS KASD+LLM+Y PF+G  ++AVLRGLV  S K +G+
Sbjct: 101 GASVVTSMAAILGEMIGSGKASDRLLMMYVPFMGFGILAVLRGLVCRSTKNTGS 154


>ref|XP_002881222.1| hypothetical protein ARALYDRAFT_482166 [Arabidopsis lyrata subsp.
           lyrata] gi|297327061|gb|EFH57481.1| hypothetical protein
           ARALYDRAFT_482166 [Arabidopsis lyrata subsp. lyrata]
          Length = 168

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 29/53 (54%), Positives = 41/53 (77%)
 Frame = -1

Query: 312 GVSTFTSMVAILSELLGSQKASDKLLMVYGPFLGVAVIAVLRGLVPASKKTSG 154
           G S  TSM AIL E++GS KAS+KLL++Y PF+G+ ++A+LRGL+  S K+ G
Sbjct: 101 GASVVTSMAAILGEMIGSGKASEKLLIIYVPFMGIGILALLRGLLSQSNKSGG 153


Top