BLASTX nr result

ID: Coptis21_contig00006357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006357
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273917.1| PREDICTED: uncharacterized protein LOC100242...   155   1e-35
ref|XP_002276709.1| PREDICTED: uncharacterized protein LOC100250...   153   6e-35
ref|XP_002310110.1| predicted protein [Populus trichocarpa] gi|2...   150   3e-34
ref|NP_001237336.1| uncharacterized protein LOC100306344 [Glycin...   148   1e-33
ref|XP_002510707.1| conserved hypothetical protein [Ricinus comm...   148   2e-33

>ref|XP_002273917.1| PREDICTED: uncharacterized protein LOC100242710 [Vitis vinifera]
           gi|297745580|emb|CBI40745.3| unnamed protein product
           [Vitis vinifera]
          Length = 171

 Score =  155 bits (392), Expect = 1e-35
 Identities = 94/176 (53%), Positives = 109/176 (61%), Gaps = 16/176 (9%)
 Frame = +2

Query: 74  MASLANSFITATNTPSHFFSSDFASP---------GRNLSLIPVYQKKGKFPTLKRSLTV 226
           MA+ +NS +       HF S     P           NLS  P +  K +F T KR+LTV
Sbjct: 1   MAAFSNSLV-------HFSSGACLKPVDRYLGSLGPTNLSFNPNHVGKVQFFTSKRALTV 53

Query: 227 QAGYSGDAGRPSSASXXXXXXXXXXXXXXXXXCVYAPQISKALAGTDRKDLMRKLPKFIY 406
           QA YS D G+ S+A+                 CVYAPQISKALAG DRKDLMRKLPKFIY
Sbjct: 54  QAAYSDDGGKQSNANFFLGGFVLGGLIVGTLGCVYAPQISKALAGADRKDLMRKLPKFIY 113

Query: 407 DEEKALERTRKILAEKIEQLNSAIDDVSSQLR-------ADDTPNGVAVVADEIEA 553
           DEEKALE+TRKILA+KI+QLNSAIDDVSSQLR       ADD PNG  + +DE+EA
Sbjct: 114 DEEKALEKTRKILAQKIDQLNSAIDDVSSQLRSEDSPDEADDAPNGATINSDEMEA 169


>ref|XP_002276709.1| PREDICTED: uncharacterized protein LOC100250729 [Vitis vinifera]
          Length = 162

 Score =  153 bits (386), Expect = 6e-35
 Identities = 92/163 (56%), Positives = 104/163 (63%), Gaps = 2/163 (1%)
 Frame = +2

Query: 74  MASLANSFITATNTPSHFF--SSDFASPGRNLSLIPVYQKKGKFPTLKRSLTVQAGYSGD 247
           M++ +N  ++  N  + F   SS       NLSL        K    K  LT++A  +GD
Sbjct: 1   MSAFSNPLVSIRNPRTQFLYGSSLKLVDQSNLSLCSTSAGNTKHLANKSLLTIRA--AGD 58

Query: 248 AGRPSSASXXXXXXXXXXXXXXXXXCVYAPQISKALAGTDRKDLMRKLPKFIYDEEKALE 427
            GRPSSAS                 CVYAPQISKALAG DRKDLMRKLPKFIYDEEKALE
Sbjct: 59  GGRPSSASIFVGGFILGGIVVGTLGCVYAPQISKALAGADRKDLMRKLPKFIYDEEKALE 118

Query: 428 RTRKILAEKIEQLNSAIDDVSSQLRADDTPNGVAVVADEIEAT 556
           +TRKIL EKI QLNSAIDDVS+QLRADD PNG AV  DEIEA+
Sbjct: 119 KTRKILTEKIAQLNSAIDDVSAQLRADDAPNGSAVNPDEIEAS 161


>ref|XP_002310110.1| predicted protein [Populus trichocarpa] gi|222853013|gb|EEE90560.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  150 bits (380), Expect = 3e-34
 Identities = 86/165 (52%), Positives = 108/165 (65%), Gaps = 4/165 (2%)
 Frame = +2

Query: 74  MASLANSFITATNTPSHFFSSDFASPGRNLSLIPV----YQKKGKFPTLKRSLTVQAGYS 241
           M +L+ S ++ T   +HF S+  +   ++  LI V       KGK  T K+SLT+QA  S
Sbjct: 1   MTALSTSLLSITTPQAHFSSAGSSLKPKDQCLICVRPGNLSSKGKPTTHKKSLTIQA--S 58

Query: 242 GDAGRPSSASXXXXXXXXXXXXXXXXXCVYAPQISKALAGTDRKDLMRKLPKFIYDEEKA 421
           G+ G  S A                  CVYAPQISKALAG DRKDLMRKLPKFIYDEEKA
Sbjct: 59  GERGGSSGAGIFIGGFILGGMVAGTLGCVYAPQISKALAGADRKDLMRKLPKFIYDEEKA 118

Query: 422 LERTRKILAEKIEQLNSAIDDVSSQLRADDTPNGVAVVADEIEAT 556
           LE+TR++LA+KI QLNSAID+VS+QL  +D PNG AV +DEI+A+
Sbjct: 119 LEKTRQVLADKIAQLNSAIDEVSAQLHPEDAPNGTAVASDEIQAS 163


>ref|NP_001237336.1| uncharacterized protein LOC100306344 [Glycine max]
           gi|255628263|gb|ACU14476.1| unknown [Glycine max]
          Length = 163

 Score =  148 bits (374), Expect = 1e-33
 Identities = 79/115 (68%), Positives = 90/115 (78%)
 Frame = +2

Query: 209 KRSLTVQAGYSGDAGRPSSASXXXXXXXXXXXXXXXXXCVYAPQISKALAGTDRKDLMRK 388
           +R LT+QA YS D GRPSSAS                 CVYAPQISKALAG DRK+LMRK
Sbjct: 48  RRPLTIQATYS-DGGRPSSASVFVGGFLLGGLIVGTLGCVYAPQISKALAGADRKELMRK 106

Query: 389 LPKFIYDEEKALERTRKILAEKIEQLNSAIDDVSSQLRADDTPNGVAVVADEIEA 553
           LPKFIYDEEKALE+TRK+LAEKIEQLN+AIDDVS+QLR+++  NGVAV +DEIEA
Sbjct: 107 LPKFIYDEEKALEKTRKVLAEKIEQLNAAIDDVSAQLRSEEASNGVAVNSDEIEA 161


>ref|XP_002510707.1| conserved hypothetical protein [Ricinus communis]
           gi|223551408|gb|EEF52894.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 166

 Score =  148 bits (373), Expect = 2e-33
 Identities = 83/122 (68%), Positives = 92/122 (75%)
 Frame = +2

Query: 188 KGKFPTLKRSLTVQAGYSGDAGRPSSASXXXXXXXXXXXXXXXXXCVYAPQISKALAGTD 367
           K +  T +RSLTV+A  + D GRPSS S                 CVYAPQISKALAGTD
Sbjct: 46  KVQLTTSRRSLTVRA--ASDDGRPSSGSIFVGGFVLGGLIVGALGCVYAPQISKALAGTD 103

Query: 368 RKDLMRKLPKFIYDEEKALERTRKILAEKIEQLNSAIDDVSSQLRADDTPNGVAVVADEI 547
           RKDLMRKLPKFIYDEEKALE+TRK+L EKI QLNSAIDDVS+QLR+DD+PNGVA V DEI
Sbjct: 104 RKDLMRKLPKFIYDEEKALEKTRKVLTEKIAQLNSAIDDVSAQLRSDDSPNGVA-VNDEI 162

Query: 548 EA 553
           EA
Sbjct: 163 EA 164


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