BLASTX nr result

ID: Coptis21_contig00006338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006338
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313270.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_002273526.2| PREDICTED: dihydropyrimidinase-like [Vitis v...    59   4e-07
ref|XP_002530842.1| dihydropyrimidinase, putative [Ricinus commu...    59   4e-07
ref|XP_003545693.1| PREDICTED: dihydropyrimidinase-like [Glycine...    59   5e-07
ref|XP_003531539.1| PREDICTED: LOW QUALITY PROTEIN: dihydropyrim...    58   9e-07

>ref|XP_002313270.1| predicted protein [Populus trichocarpa] gi|222849678|gb|EEE87225.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/47 (72%), Positives = 37/47 (78%), Gaps = 2/47 (4%)
 Frame = -1

Query: 137 SESNQIPEFCDVYGDFECG--SSSKLLIKGGTVVNAHHQEVADVYVE 3
           S+SNQ  E    YG+  CG  SS+KLLIKGGTVVNAHHQEVADVYVE
Sbjct: 23  SQSNQFCEAGIGYGEVGCGLSSSTKLLIKGGTVVNAHHQEVADVYVE 69


>ref|XP_002273526.2| PREDICTED: dihydropyrimidinase-like [Vitis vinifera]
           gi|296083879|emb|CBI24267.3| unnamed protein product
           [Vitis vinifera]
          Length = 536

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/52 (61%), Positives = 37/52 (71%), Gaps = 7/52 (13%)
 Frame = -1

Query: 137 SESNQIPEFCDV---YGDFEC----GSSSKLLIKGGTVVNAHHQEVADVYVE 3
           S  ++  EFCD    +GD  C     S+SKLLIKGGTVVNAHHQE+ADVYVE
Sbjct: 23  SRISKSSEFCDAGTGFGDSGCVVSSKSASKLLIKGGTVVNAHHQEIADVYVE 74


>ref|XP_002530842.1| dihydropyrimidinase, putative [Ricinus communis]
           gi|223529606|gb|EEF31555.1| dihydropyrimidinase,
           putative [Ricinus communis]
          Length = 503

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/51 (64%), Positives = 35/51 (68%), Gaps = 6/51 (11%)
 Frame = -1

Query: 137 SESNQIPEFCDVYGDFECG------SSSKLLIKGGTVVNAHHQEVADVYVE 3
           S SNQ  E    YG+  CG      SSSK+LIKGGTVVNAH QEVADVYVE
Sbjct: 28  SSSNQFCEVGSGYGETGCGIQSSSSSSSKILIKGGTVVNAHSQEVADVYVE 78


>ref|XP_003545693.1| PREDICTED: dihydropyrimidinase-like [Glycine max]
          Length = 524

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/45 (71%), Positives = 35/45 (77%)
 Frame = -1

Query: 137 SESNQIPEFCDVYGDFECGSSSKLLIKGGTVVNAHHQEVADVYVE 3
           S+SNQ   FCD       G+SSKLLIKGGTVVNAHHQ+VADVYVE
Sbjct: 27  SQSNQ---FCDA------GTSSKLLIKGGTVVNAHHQQVADVYVE 62


>ref|XP_003531539.1| PREDICTED: LOW QUALITY PROTEIN: dihydropyrimidinase-like [Glycine
           max]
          Length = 514

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/45 (71%), Positives = 34/45 (75%)
 Frame = -1

Query: 137 SESNQIPEFCDVYGDFECGSSSKLLIKGGTVVNAHHQEVADVYVE 3
           S SNQ   FCD       G+SSKLLIKGGTVVNAHHQ+VADVYVE
Sbjct: 17  SRSNQ---FCDA------GTSSKLLIKGGTVVNAHHQQVADVYVE 52


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