BLASTX nr result
ID: Coptis21_contig00006334
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00006334
(1210 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001237921.1| PHD1 [Glycine max] gi|115394660|gb|ABI97246.... 338 9e-95
ref|XP_002276418.2| PREDICTED: PHD finger protein ALFIN-LIKE 5 i... 338 1e-94
ref|XP_003633111.1| PREDICTED: PHD finger protein ALFIN-LIKE 5-l... 334 1e-93
ref|XP_002514076.1| DNA binding protein, putative [Ricinus commu... 334 1e-93
ref|XP_002280895.1| PREDICTED: PHD finger protein ALFIN-LIKE 5 [... 333 2e-93
>ref|NP_001237921.1| PHD1 [Glycine max] gi|115394660|gb|ABI97246.1| PHD1 [Glycine max]
Length = 253
Score = 338 bits (866), Expect(2) = 9e-95
Identities = 167/239 (69%), Positives = 183/239 (76%), Gaps = 1/239 (0%)
Frame = -2
Query: 1173 YNARTVEEVFRDFKGRRVALIKALTTDSVDFFNQCDPEKDNLCLYGNPNEQWAVDLXXXX 994
YN RTVEEVFRDFKGRR LIKALTTD DF+NQCDPEK+NLCLYG P+EQW V+L
Sbjct: 6 YNPRTVEEVFRDFKGRRAGLIKALTTDVEDFYNQCDPEKENLCLYGFPSEQWEVNLPAEE 65
Query: 993 XXXXXXXXALGINFARNGMPEKDWLSLVAVHSDAWLIAVAFYFGARFGFDKNERKRLFNM 814
LGINFAR+GM EKDWLSLVAVHSDAWL+A+AFYFGARFGFDK +RKRLFNM
Sbjct: 66 VPPELPEPVLGINFARDGMQEKDWLSLVAVHSDAWLLAIAFYFGARFGFDKADRKRLFNM 125
Query: 813 INELPTIFEAVSGTEKKQVKKDKTSVVNQSSSKGKTNSKA-RGPESLGKQSKPKQPIXXX 637
INELPTIFE V+G KKQV K+K+SV N S SK K++SKA R PES +QSKP QP
Sbjct: 126 INELPTIFEVVTGAAKKQV-KEKSSVSNHSGSKSKSSSKAQRAPESQSRQSKPLQPKDED 184
Query: 636 XXXXXXXXXXXXDALCGACGENYGKDEFWICCDQCELWFHGKCVKITQARAEHIKQYKC 460
+ LCGACGE+YG DEFWICCD CE WFHGKCVKIT ARAEHIKQYKC
Sbjct: 185 EELDDQDDDEHGETLCGACGEHYGTDEFWICCDICEKWFHGKCVKITPARAEHIKQYKC 243
Score = 37.0 bits (84), Expect(2) = 9e-95
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 407 IKQYKCPSCSNKRAR 363
IKQYKCPSCSNKRAR
Sbjct: 238 IKQYKCPSCSNKRAR 252
>ref|XP_002276418.2| PREDICTED: PHD finger protein ALFIN-LIKE 5 isoform 2 [Vitis vinifera]
Length = 252
Score = 338 bits (868), Expect(2) = 1e-94
Identities = 169/244 (69%), Positives = 185/244 (75%)
Frame = -2
Query: 1191 MEGGAQYNARTVEEVFRDFKGRRVALIKALTTDSVDFFNQCDPEKDNLCLYGNPNEQWAV 1012
M+GGA YN RTVEEVFRDFKGRR +IKALTTD +F+ QCDPEK+NLCLYG PNE W V
Sbjct: 1 MDGGANYNPRTVEEVFRDFKGRRAGMIKALTTDVDEFYQQCDPEKENLCLYGFPNELWEV 60
Query: 1011 DLXXXXXXXXXXXXALGINFARNGMPEKDWLSLVAVHSDAWLIAVAFYFGARFGFDKNER 832
+L ALGINFAR+GM EKDWLSLVAVHSDAWL+AVAFYFGARFGFDK +R
Sbjct: 61 NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120
Query: 831 KRLFNMINELPTIFEAVSGTEKKQVKKDKTSVVNQSSSKGKTNSKARGPESLGKQSKPKQ 652
KRLFNMIN+LPTIFE V+GT KKQV K+K+SV N SS+K K+NSK RG ES GK SK Q
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQV-KEKSSVSNHSSNKSKSNSKVRGSESQGKYSKTPQ 179
Query: 651 PIXXXXXXXXXXXXXXXDALCGACGENYGKDEFWICCDQCELWFHGKCVKITQARAEHIK 472
+ LCGACGENY DEFWICCD CE WFHGKCVKIT ARAEHIK
Sbjct: 180 K-DEDEGLEEEEEDEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK 238
Query: 471 QYKC 460
QYKC
Sbjct: 239 QYKC 242
Score = 35.8 bits (81), Expect(2) = 1e-94
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -3
Query: 407 IKQYKCPSCSNKRAR 363
IKQYKCPSCSNKR+R
Sbjct: 237 IKQYKCPSCSNKRSR 251
>ref|XP_003633111.1| PREDICTED: PHD finger protein ALFIN-LIKE 5-like [Vitis vinifera]
gi|297738599|emb|CBI27844.3| unnamed protein product
[Vitis vinifera]
Length = 252
Score = 334 bits (857), Expect(2) = 1e-93
Identities = 168/244 (68%), Positives = 183/244 (75%)
Frame = -2
Query: 1191 MEGGAQYNARTVEEVFRDFKGRRVALIKALTTDSVDFFNQCDPEKDNLCLYGNPNEQWAV 1012
M+GG QYN RTVEEVFRDFKGRR +IKALTTD +F+ QCDPEK+NLCLYG PNE W V
Sbjct: 1 MDGGPQYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNELWEV 60
Query: 1011 DLXXXXXXXXXXXXALGINFARNGMPEKDWLSLVAVHSDAWLIAVAFYFGARFGFDKNER 832
+L ALGINFAR+GM EKDWLSLVAVHSDAWL+AVAFYFGARFGFDK +R
Sbjct: 61 NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120
Query: 831 KRLFNMINELPTIFEAVSGTEKKQVKKDKTSVVNQSSSKGKTNSKARGPESLGKQSKPKQ 652
KRLFNMIN+LPTIFE V+G KKQV K+K+SV N SS+K K+NSK RG ES K K Q
Sbjct: 121 KRLFNMINDLPTIFEVVTGAAKKQV-KEKSSVSNHSSNKSKSNSKVRGSES-AKYLKGGQ 178
Query: 651 PIXXXXXXXXXXXXXXXDALCGACGENYGKDEFWICCDQCELWFHGKCVKITQARAEHIK 472
P D LCGACGENY DEFWICCD CE WFHGKCVKIT ARAEHIK
Sbjct: 179 PKDEEEGLDEVDEEEHGDTLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK 238
Query: 471 QYKC 460
QYKC
Sbjct: 239 QYKC 242
Score = 37.0 bits (84), Expect(2) = 1e-93
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 407 IKQYKCPSCSNKRAR 363
IKQYKCPSCSNKRAR
Sbjct: 237 IKQYKCPSCSNKRAR 251
>ref|XP_002514076.1| DNA binding protein, putative [Ricinus communis]
gi|223546532|gb|EEF48030.1| DNA binding protein, putative
[Ricinus communis]
Length = 251
Score = 334 bits (857), Expect(2) = 1e-93
Identities = 169/244 (69%), Positives = 185/244 (75%)
Frame = -2
Query: 1191 MEGGAQYNARTVEEVFRDFKGRRVALIKALTTDSVDFFNQCDPEKDNLCLYGNPNEQWAV 1012
M+GG QYN RTVEEVFRDFKGRR +IKALTTD +F+ QCDPEK+NLCLYG PNEQW V
Sbjct: 1 MDGGVQYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEQWEV 60
Query: 1011 DLXXXXXXXXXXXXALGINFARNGMPEKDWLSLVAVHSDAWLIAVAFYFGARFGFDKNER 832
+L ALGINFAR+GM EKDWLSLVAVHSDAWL+AVAFYFGARFGFDK +R
Sbjct: 61 NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120
Query: 831 KRLFNMINELPTIFEAVSGTEKKQVKKDKTSVVNQSSSKGKTNSKARGPESLGKQSKPKQ 652
KRLF MIN+LPTIFE V+GT KKQ K+K+SV N SS+K K++SK RG ES GK SK Q
Sbjct: 121 KRLFTMINDLPTIFEVVTGTAKKQA-KEKSSVSNHSSNKSKSSSKGRGSES-GKYSK-AQ 177
Query: 651 PIXXXXXXXXXXXXXXXDALCGACGENYGKDEFWICCDQCELWFHGKCVKITQARAEHIK 472
P D LCGACGENY DEFWICCD CE WFHGKCVKIT ARAEHIK
Sbjct: 178 PKDEDEGLDEEDEEEHGDTLCGACGENYAADEFWICCDICEKWFHGKCVKITPARAEHIK 237
Query: 471 QYKC 460
QYKC
Sbjct: 238 QYKC 241
Score = 37.0 bits (84), Expect(2) = 1e-93
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 407 IKQYKCPSCSNKRAR 363
IKQYKCPSCSNKRAR
Sbjct: 236 IKQYKCPSCSNKRAR 250
>ref|XP_002280895.1| PREDICTED: PHD finger protein ALFIN-LIKE 5 [Vitis vinifera]
gi|296081695|emb|CBI20700.3| unnamed protein product
[Vitis vinifera]
Length = 253
Score = 333 bits (855), Expect(2) = 2e-93
Identities = 168/245 (68%), Positives = 186/245 (75%), Gaps = 1/245 (0%)
Frame = -2
Query: 1191 MEGGAQYNARTVEEVFRDFKGRRVALIKALTTDSVDFFNQCDPEKDNLCLYGNPNEQWAV 1012
M+GG YN RTVEEVFRDFKGRR +IKALTTD +F+ QCDP+K+NLCLYG P+EQW V
Sbjct: 1 MDGGPPYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPDKENLCLYGFPSEQWEV 60
Query: 1011 DLXXXXXXXXXXXXALGINFARNGMPEKDWLSLVAVHSDAWLIAVAFYFGARFGFDKNER 832
+L ALGINFAR+GM EKDWLSLVAVHSDAWL+AVAFYFGARFGFDK +R
Sbjct: 61 NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120
Query: 831 KRLFNMINELPTIFEAVSGTEKKQVKKDKTSVVNQSSSKGKTNSKARGPESLGKQSKPKQ 652
KRLFNMIN+LPTIFE V+GT KKQV K+K+SV N SS+K K+NSK RG ES GK SKP Q
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQV-KEKSSVSNHSSNKSKSNSK-RGSESQGKYSKPLQ 178
Query: 651 -PIXXXXXXXXXXXXXXXDALCGACGENYGKDEFWICCDQCELWFHGKCVKITQARAEHI 475
+ LCGACGENY DEFWICCD CE WFHGKCVKIT ARAEHI
Sbjct: 179 AKDEDEEGLEEEEEEEHGETLCGACGENYASDEFWICCDVCEKWFHGKCVKITPARAEHI 238
Query: 474 KQYKC 460
KQYKC
Sbjct: 239 KQYKC 243
Score = 37.0 bits (84), Expect(2) = 2e-93
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 407 IKQYKCPSCSNKRAR 363
IKQYKCPSCSNKRAR
Sbjct: 238 IKQYKCPSCSNKRAR 252