BLASTX nr result

ID: Coptis21_contig00006333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006333
         (1696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17381.3| unnamed protein product [Vitis vinifera]              583   e-164
ref|XP_002268226.1| PREDICTED: WD repeat-containing protein 82-B...   579   e-163
ref|XP_004134865.1| PREDICTED: WD repeat-containing protein 82-B...   578   e-162
ref|XP_004158872.1| PREDICTED: WD repeat-containing protein 82-B...   577   e-162
emb|CAN80813.1| hypothetical protein VITISV_020464 [Vitis vinifera]   573   e-161

>emb|CBI17381.3| unnamed protein product [Vitis vinifera]
          Length = 522

 Score =  583 bits (1503), Expect = e-164
 Identities = 283/340 (83%), Positives = 306/340 (90%)
 Frame = +1

Query: 25   YSSSNEMMAGGRESEREEKVSLELTEEIIKSMEVGMAFRDYNGRISSMDFHKASGYLVTA 204
            ++++N+M  G  +SERE+KV+LELTEEI +SMEVGMAFRDY+GRISSMDFH+ S YLVTA
Sbjct: 183  FTTTNQMAGGQGQSEREDKVALELTEEIFQSMEVGMAFRDYSGRISSMDFHRTSSYLVTA 242

Query: 205  SDDESIRLYDVSNAMCLKTINSKKYGVDLVSFTSQPTTVIYSSKNGWDESLRLLSLHDNK 384
            SDDESIRLYDV+   CLKTINSKKYGVDLV FTS PTTVIYSSKNGWDESLRLLSLHDNK
Sbjct: 243  SDDESIRLYDVATGTCLKTINSKKYGVDLVCFTSDPTTVIYSSKNGWDESLRLLSLHDNK 302

Query: 385  YLRYFKGHHDRVVSLSMCSRKECFISGSLDRTVLLWDQRAEKCQSLLRVQGRPAVAYDDQ 564
            YLRYFKGHHDRVVSLS+CSRKECFISGSLDRTVLLWDQRAEKCQ LLRVQGRPA AYDDQ
Sbjct: 303  YLRYFKGHHDRVVSLSLCSRKECFISGSLDRTVLLWDQRAEKCQGLLRVQGRPATAYDDQ 362

Query: 565  GLVFTIAFGGYVRMFDARKYEKGPFDIFSVGGDLSDANVVKYSNDGRLMLLTTTDGFIHV 744
            GLVF IAFGGYVR+FDARKY+KGPF+IFSVGGD+SDANVVK+SNDGRLMLLTT DG IHV
Sbjct: 363  GLVFAIAFGGYVRLFDARKYDKGPFEIFSVGGDISDANVVKFSNDGRLMLLTTMDGHIHV 422

Query: 745  LDSFRGTLLSTYNVKPVSSNSTLEASFSPEGMFXXXXXXXXXXYVWNIRSGKEVASWMST 924
            LDSFRGTLLSTYNVKPVSS STLEASFSPEGMF          Y W++RSGKEVASWMST
Sbjct: 423  LDSFRGTLLSTYNVKPVSSTSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMST 482

Query: 925  ELEPPVIKWAPGCLMFATGSSELSFWVPDLSKLGSFVGAK 1044
            E EPPVIKWAPG LMF TGSSELSFW+PDLSKLG++ G K
Sbjct: 483  ETEPPVIKWAPGSLMFVTGSSELSFWIPDLSKLGAYAGRK 522


>ref|XP_002268226.1| PREDICTED: WD repeat-containing protein 82-B-like [Vitis vinifera]
          Length = 334

 Score =  579 bits (1493), Expect = e-163
 Identities = 284/334 (85%), Positives = 303/334 (90%), Gaps = 1/334 (0%)
 Frame = +1

Query: 46   MAGGR-ESEREEKVSLELTEEIIKSMEVGMAFRDYNGRISSMDFHKASGYLVTASDDESI 222
            MAGG+ +SERE+KV+LELTEEI +SMEVGMAFRDY+GRISSMDFH+ S YLVTASDDESI
Sbjct: 1    MAGGQGQSEREDKVALELTEEIFQSMEVGMAFRDYSGRISSMDFHRTSSYLVTASDDESI 60

Query: 223  RLYDVSNAMCLKTINSKKYGVDLVSFTSQPTTVIYSSKNGWDESLRLLSLHDNKYLRYFK 402
            RLYDV+   CLKTINSKKYGVDLV FTS PTTVIYSSKNGWDESLRLLSLHDNKYLRYFK
Sbjct: 61   RLYDVATGTCLKTINSKKYGVDLVCFTSDPTTVIYSSKNGWDESLRLLSLHDNKYLRYFK 120

Query: 403  GHHDRVVSLSMCSRKECFISGSLDRTVLLWDQRAEKCQSLLRVQGRPAVAYDDQGLVFTI 582
            GHHDRVVSLS+CSRKECFISGSLDRTVLLWDQRAEKCQ LLRVQGRPA AYDDQGLVF I
Sbjct: 121  GHHDRVVSLSLCSRKECFISGSLDRTVLLWDQRAEKCQGLLRVQGRPATAYDDQGLVFAI 180

Query: 583  AFGGYVRMFDARKYEKGPFDIFSVGGDLSDANVVKYSNDGRLMLLTTTDGFIHVLDSFRG 762
            AFGGYVR+FDARKY+KGPF+IFSVGGD+SDANVVK+SNDGRLMLLTT DG IHVLDSFRG
Sbjct: 181  AFGGYVRLFDARKYDKGPFEIFSVGGDISDANVVKFSNDGRLMLLTTMDGHIHVLDSFRG 240

Query: 763  TLLSTYNVKPVSSNSTLEASFSPEGMFXXXXXXXXXXYVWNIRSGKEVASWMSTELEPPV 942
            TLLSTYNVKPVSS STLEASFSPEGMF          Y W++RSGKEVASWMSTE EPPV
Sbjct: 241  TLLSTYNVKPVSSTSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTETEPPV 300

Query: 943  IKWAPGCLMFATGSSELSFWVPDLSKLGSFVGAK 1044
            IKWAPG LMF TGSSELSFW+PDLSKLG++ G K
Sbjct: 301  IKWAPGSLMFVTGSSELSFWIPDLSKLGAYAGRK 334


>ref|XP_004134865.1| PREDICTED: WD repeat-containing protein 82-B-like [Cucumis sativus]
          Length = 332

 Score =  578 bits (1490), Expect = e-162
 Identities = 280/331 (84%), Positives = 303/331 (91%)
 Frame = +1

Query: 52   GGRESEREEKVSLELTEEIIKSMEVGMAFRDYNGRISSMDFHKASGYLVTASDDESIRLY 231
            GG +SEREEKVSLELTEEI++SMEVGM FRDYNGRISSMDFHK S YLVTASDDESIRLY
Sbjct: 2    GGSQSEREEKVSLELTEEILQSMEVGMTFRDYNGRISSMDFHKTSSYLVTASDDESIRLY 61

Query: 232  DVSNAMCLKTINSKKYGVDLVSFTSQPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHH 411
            DV++A CLKTINSKKYGVDLV FTS PTTVIYSSKNGWDESLRLLSL+DNKYLRYF+GHH
Sbjct: 62   DVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFRGHH 121

Query: 412  DRVVSLSMCSRKECFISGSLDRTVLLWDQRAEKCQSLLRVQGRPAVAYDDQGLVFTIAFG 591
            DRVVSLS+C+RKECFISGSLDRTVLLWDQRAEKCQ LLRVQG+PA AYD+QG+VF IAFG
Sbjct: 122  DRVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFG 181

Query: 592  GYVRMFDARKYEKGPFDIFSVGGDLSDANVVKYSNDGRLMLLTTTDGFIHVLDSFRGTLL 771
            GY+RMFDARKYEKGPFDIFSVG DLSDAN+VK+SNDGRLMLLTT+DG IHVLDSFRGTLL
Sbjct: 182  GYIRMFDARKYEKGPFDIFSVGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLL 241

Query: 772  STYNVKPVSSNSTLEASFSPEGMFXXXXXXXXXXYVWNIRSGKEVASWMSTELEPPVIKW 951
            STYNVKP+S N TLEASFSPEGMF          Y W++RSGKEVASWMSTE+EPPVIKW
Sbjct: 242  STYNVKPISRNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKW 301

Query: 952  APGCLMFATGSSELSFWVPDLSKLGSFVGAK 1044
            APG LMFATGSSELSFW+PDLSKLG++V  K
Sbjct: 302  APGSLMFATGSSELSFWIPDLSKLGAYVDRK 332


>ref|XP_004158872.1| PREDICTED: WD repeat-containing protein 82-B-like [Cucumis sativus]
          Length = 332

 Score =  577 bits (1487), Expect = e-162
 Identities = 279/331 (84%), Positives = 303/331 (91%)
 Frame = +1

Query: 52   GGRESEREEKVSLELTEEIIKSMEVGMAFRDYNGRISSMDFHKASGYLVTASDDESIRLY 231
            GG +SEREEKVSLELTEEI++SMEVGM FRDYNGRISSMDFH+ S YLVTASDDESIRLY
Sbjct: 2    GGSQSEREEKVSLELTEEILQSMEVGMTFRDYNGRISSMDFHRTSSYLVTASDDESIRLY 61

Query: 232  DVSNAMCLKTINSKKYGVDLVSFTSQPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHH 411
            DV++A CLKTINSKKYGVDLV FTS PTTVIYSSKNGWDESLRLLSL+DNKYLRYF+GHH
Sbjct: 62   DVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFRGHH 121

Query: 412  DRVVSLSMCSRKECFISGSLDRTVLLWDQRAEKCQSLLRVQGRPAVAYDDQGLVFTIAFG 591
            DRVVSLS+C+RKECFISGSLDRTVLLWDQRAEKCQ LLRVQG+PA AYD+QG+VF IAFG
Sbjct: 122  DRVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFG 181

Query: 592  GYVRMFDARKYEKGPFDIFSVGGDLSDANVVKYSNDGRLMLLTTTDGFIHVLDSFRGTLL 771
            GY+RMFDARKYEKGPFDIFSVG DLSDAN+VK+SNDGRLMLLTT+DG IHVLDSFRGTLL
Sbjct: 182  GYIRMFDARKYEKGPFDIFSVGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLL 241

Query: 772  STYNVKPVSSNSTLEASFSPEGMFXXXXXXXXXXYVWNIRSGKEVASWMSTELEPPVIKW 951
            STYNVKP+S N TLEASFSPEGMF          Y W++RSGKEVASWMSTE+EPPVIKW
Sbjct: 242  STYNVKPISRNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKW 301

Query: 952  APGCLMFATGSSELSFWVPDLSKLGSFVGAK 1044
            APG LMFATGSSELSFW+PDLSKLG++V  K
Sbjct: 302  APGSLMFATGSSELSFWIPDLSKLGAYVDRK 332


>emb|CAN80813.1| hypothetical protein VITISV_020464 [Vitis vinifera]
          Length = 328

 Score =  573 bits (1478), Expect = e-161
 Identities = 279/327 (85%), Positives = 297/327 (90%)
 Frame = +1

Query: 64   SEREEKVSLELTEEIIKSMEVGMAFRDYNGRISSMDFHKASGYLVTASDDESIRLYDVSN 243
            +ERE+KV+LELTEEI +SMEVGMAFRDY+GRISSMDFH+ S YLVTASDDESIRLYDV+ 
Sbjct: 2    AEREDKVALELTEEIFQSMEVGMAFRDYSGRISSMDFHRTSSYLVTASDDESIRLYDVAT 61

Query: 244  AMCLKTINSKKYGVDLVSFTSQPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVV 423
              CLKTINSKKYGVDLV FTS PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVV
Sbjct: 62   GTCLKTINSKKYGVDLVCFTSDPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVV 121

Query: 424  SLSMCSRKECFISGSLDRTVLLWDQRAEKCQSLLRVQGRPAVAYDDQGLVFTIAFGGYVR 603
            SLS+CSRKECFISGSLDRTVLLWDQRAEKCQ LLRVQGRPA AYDDQGLVF IAFGGYVR
Sbjct: 122  SLSLCSRKECFISGSLDRTVLLWDQRAEKCQGLLRVQGRPATAYDDQGLVFAIAFGGYVR 181

Query: 604  MFDARKYEKGPFDIFSVGGDLSDANVVKYSNDGRLMLLTTTDGFIHVLDSFRGTLLSTYN 783
            +FDARKY+KGPF+IFSVGGD+SDANVVK+SNDGRLMLLTT DG IHVLDSFRGTLLSTYN
Sbjct: 182  LFDARKYDKGPFEIFSVGGDISDANVVKFSNDGRLMLLTTMDGHIHVLDSFRGTLLSTYN 241

Query: 784  VKPVSSNSTLEASFSPEGMFXXXXXXXXXXYVWNIRSGKEVASWMSTELEPPVIKWAPGC 963
            VKPVSS STLEASFSPEGMF          Y W++RSGKEVASWMSTE EPPVIKWAPG 
Sbjct: 242  VKPVSSTSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTETEPPVIKWAPGS 301

Query: 964  LMFATGSSELSFWVPDLSKLGSFVGAK 1044
            LMF TGSSELSFW+PDLSKLG++ G K
Sbjct: 302  LMFVTGSSELSFWIPDLSKLGAYAGRK 328


Top