BLASTX nr result

ID: Coptis21_contig00006332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006332
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30455.3| unnamed protein product [Vitis vinifera]              176   1e-42
ref|XP_002276415.1| PREDICTED: laccase-7 [Vitis vinifera]             176   1e-42
ref|NP_001233816.1| laccase precursor [Solanum lycopersicum] gi|...   175   3e-42
ref|XP_002527888.1| laccase, putative [Ricinus communis] gi|2235...   172   3e-41
ref|XP_002333273.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40

>emb|CBI30455.3| unnamed protein product [Vitis vinifera]
          Length = 542

 Score =  176 bits (447), Expect = 1e-42
 Identities = 79/97 (81%), Positives = 84/97 (86%)
 Frame = +3

Query: 3   RLCGEQVITAVNESFPGPTIRIHEGDQLVVHVHNRSPYNLTIHWHGVFQILSGWADGPAY 182
           RLC EQVITAVN S PGPTIR+ EGD LVVHV N+SPYNLTIHWHGVFQ+LSGWADGP Y
Sbjct: 38  RLCHEQVITAVNGSLPGPTIRVREGDTLVVHVFNKSPYNLTIHWHGVFQLLSGWADGPVY 97

Query: 183 ITQCPIIPGNSYTYKFNVTGQEGTLWWHAHVSVLRAT 293
            TQC I PG+SYTYKF +TGQEGTLWWHAHV  LRAT
Sbjct: 98  ATQCAIRPGHSYTYKFTITGQEGTLWWHAHVQWLRAT 134


>ref|XP_002276415.1| PREDICTED: laccase-7 [Vitis vinifera]
          Length = 565

 Score =  176 bits (447), Expect = 1e-42
 Identities = 79/97 (81%), Positives = 84/97 (86%)
 Frame = +3

Query: 3   RLCGEQVITAVNESFPGPTIRIHEGDQLVVHVHNRSPYNLTIHWHGVFQILSGWADGPAY 182
           RLC EQVITAVN S PGPTIR+ EGD LVVHV N+SPYNLTIHWHGVFQ+LSGWADGP Y
Sbjct: 38  RLCHEQVITAVNGSLPGPTIRVREGDTLVVHVFNKSPYNLTIHWHGVFQLLSGWADGPVY 97

Query: 183 ITQCPIIPGNSYTYKFNVTGQEGTLWWHAHVSVLRAT 293
            TQC I PG+SYTYKF +TGQEGTLWWHAHV  LRAT
Sbjct: 98  ATQCAIRPGHSYTYKFTITGQEGTLWWHAHVQWLRAT 134


>ref|NP_001233816.1| laccase precursor [Solanum lycopersicum]
           gi|170177495|gb|ACB10229.1| laccase [Solanum
           lycopersicum]
          Length = 572

 Score =  175 bits (444), Expect = 3e-42
 Identities = 78/97 (80%), Positives = 85/97 (87%)
 Frame = +3

Query: 3   RLCGEQVITAVNESFPGPTIRIHEGDQLVVHVHNRSPYNLTIHWHGVFQILSGWADGPAY 182
           RLC  QVITAVN S PGP IR++EGD LVVHV+N SPYNLTIHWHGVFQ+LSGWADGP +
Sbjct: 42  RLCRRQVITAVNGSLPGPAIRVNEGDTLVVHVYNLSPYNLTIHWHGVFQLLSGWADGPEF 101

Query: 183 ITQCPIIPGNSYTYKFNVTGQEGTLWWHAHVSVLRAT 293
            TQCPI PG+SYTYKF +TGQEGTLWWHAHVS LRAT
Sbjct: 102 ATQCPIRPGHSYTYKFRITGQEGTLWWHAHVSWLRAT 138


>ref|XP_002527888.1| laccase, putative [Ricinus communis] gi|223532739|gb|EEF34519.1|
           laccase, putative [Ricinus communis]
          Length = 540

 Score =  172 bits (436), Expect = 3e-41
 Identities = 75/97 (77%), Positives = 83/97 (85%)
 Frame = +3

Query: 3   RLCGEQVITAVNESFPGPTIRIHEGDQLVVHVHNRSPYNLTIHWHGVFQILSGWADGPAY 182
           RLC E VITAVN S PGPT+R+ EGD L+VHV N+SPYN+TIHWHG+FQ LSGWADGP  
Sbjct: 11  RLCNEHVITAVNGSLPGPTLRVREGDTLIVHVFNKSPYNITIHWHGIFQKLSGWADGPDM 70

Query: 183 ITQCPIIPGNSYTYKFNVTGQEGTLWWHAHVSVLRAT 293
           +TQCPIIPG+SYTYKF V  QEGTLWWHAHVS LRAT
Sbjct: 71  VTQCPIIPGSSYTYKFRVIKQEGTLWWHAHVSTLRAT 107


>ref|XP_002333273.1| predicted protein [Populus trichocarpa] gi|222835874|gb|EEE74295.1|
           predicted protein [Populus trichocarpa]
          Length = 568

 Score =  169 bits (429), Expect = 2e-40
 Identities = 73/97 (75%), Positives = 82/97 (84%)
 Frame = +3

Query: 3   RLCGEQVITAVNESFPGPTIRIHEGDQLVVHVHNRSPYNLTIHWHGVFQILSGWADGPAY 182
           RLC EQV+TAVN S PGPT+R+ EGD L+VHV N+SPYNLTIHWHGVFQ+LS WADGP+ 
Sbjct: 38  RLCSEQVVTAVNGSLPGPTLRVREGDTLIVHVFNKSPYNLTIHWHGVFQLLSAWADGPSM 97

Query: 183 ITQCPIIPGNSYTYKFNVTGQEGTLWWHAHVSVLRAT 293
           +TQCPI PG  YTYKF +  QEGTLWWHAHVS LRAT
Sbjct: 98  VTQCPIPPGGKYTYKFELLQQEGTLWWHAHVSFLRAT 134


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