BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006322
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264418.1| PREDICTED: nifU-like protein 2, chloroplasti...   298   1e-78
ref|XP_002529001.1| Nitrogen fixation protein nifU, putative [Ri...   289   6e-76
ref|XP_002328771.1| predicted protein [Populus trichocarpa] gi|2...   289   6e-76
gb|ACR38153.1| unknown [Zea mays] gi|413925507|gb|AFW65439.1| NF...   288   1e-75
dbj|BAK08356.1| predicted protein [Hordeum vulgare subsp. vulgare]    287   3e-75

>ref|XP_002264418.1| PREDICTED: nifU-like protein 2, chloroplastic [Vitis vinifera]
           gi|297739542|emb|CBI29724.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  298 bits (764), Expect = 1e-78
 Identities = 166/228 (72%), Positives = 182/228 (79%), Gaps = 2/228 (0%)
 Frame = +2

Query: 8   MQSVAALNPS-SCSCHRTLEPSCSGTLLTFPPSFKNLGFNRTGISFRGISTCQLPKSSLP 184
           MQ V   NPS  C     LEPS S +     PSF    F R G   R  ++ +  +   P
Sbjct: 1   MQGVVVANPSYCCRAKHALEPSSSSSSPIKIPSF----FTR-GSDLRRRASSRSLRIRNP 55

Query: 185 HRGR-QVVKAVATPDSALELPLTAENVESVLDEVRPYLMADGGNVVLHEIDGNVVRLKLQ 361
            R R +VVKAVATPDSA+ELPLTAENVESVLDE+RPYL++DGGNV LHEIDGNVVRLKLQ
Sbjct: 56  IRTRSRVVKAVATPDSAVELPLTAENVESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQ 115

Query: 362 GACGSCPSSIVTMKMGIERRLMEAIPEIVAVEPLTDEETGLELNEENIDQVLGEIRPYLV 541
           GACGSCPSS++TMKMGIERRLME IPEIVAVEP+ DEETGLELNEENI++VL EIRPYLV
Sbjct: 116 GACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLV 175

Query: 542 GTGGGDLKLVAIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAA 685
           G  GG L+LV IDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAA
Sbjct: 176 GAAGGSLELVGIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAA 223


>ref|XP_002529001.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
           gi|223531541|gb|EEF33371.1| Nitrogen fixation protein
           nifU, putative [Ricinus communis]
          Length = 226

 Score =  289 bits (740), Expect = 6e-76
 Identities = 160/228 (70%), Positives = 181/228 (79%), Gaps = 2/228 (0%)
 Frame = +2

Query: 8   MQSVAALNPSSCSCHRTLE--PSCSGTLLTFPPSFKNLGFNRTGISFRGISTCQLPKSSL 181
           MQ+V  +NP+    H+TL+  PS S    +       +  NR     R     ++P  S+
Sbjct: 1   MQAVV-INPTYSRPHQTLDSAPSSSRPFKSSSLFSARVSLNRGRNHLR-----RIPCRSV 54

Query: 182 PHRGRQVVKAVATPDSALELPLTAENVESVLDEVRPYLMADGGNVVLHEIDGNVVRLKLQ 361
               R VV+AVATP+SALELPLTAENVESVLDEVRPYL+ADGGNV LHEIDGNVVRLKLQ
Sbjct: 55  RLTRRLVVRAVATPNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQ 114

Query: 362 GACGSCPSSIVTMKMGIERRLMEAIPEIVAVEPLTDEETGLELNEENIDQVLGEIRPYLV 541
           GACGSCPSS++TMKMGIERRLME IPEIVAVEP+ DEETGLELNEENI++VL EIRPYLV
Sbjct: 115 GACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLV 174

Query: 542 GTGGGDLKLVAIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAA 685
           G  GG L+LVAI+EPI K+RITGPAAGVMTVRVAVTQKLREKIPAIAA
Sbjct: 175 GAAGGSLELVAIEEPIAKIRITGPAAGVMTVRVAVTQKLREKIPAIAA 222


>ref|XP_002328771.1| predicted protein [Populus trichocarpa] gi|222839069|gb|EEE77420.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  289 bits (740), Expect = 6e-76
 Identities = 161/231 (69%), Positives = 182/231 (78%), Gaps = 5/231 (2%)
 Frame = +2

Query: 8   MQSVAALNPSSCSCHRTLEPSCSGTL-LTFPPSFKNL--GFNRTGISFRGISTCQLPKSS 178
           MQSV   NP+ CS  +TL+ SCS  L L    S K       R+    R  + C   ++ 
Sbjct: 1   MQSVV-WNPTHCSAQQTLDTSCSSPLPLLHHKSCKGFFGAHVRSANQLRRGTPCHSLRAR 59

Query: 179 LPH--RGRQVVKAVATPDSALELPLTAENVESVLDEVRPYLMADGGNVVLHEIDGNVVRL 352
           LP   + R VVKAVATPDSA+ELPLTA+NVESVLDEVRPYL++DGGNV LHEIDGNVVRL
Sbjct: 60  LPSFTQRRLVVKAVATPDSAVELPLTADNVESVLDEVRPYLISDGGNVALHEIDGNVVRL 119

Query: 353 KLQGACGSCPSSIVTMKMGIERRLMEAIPEIVAVEPLTDEETGLELNEENIDQVLGEIRP 532
           KLQGAC SC +S+ TMKMGIERRLME IPEIVAVE ++DEETGLEL EENI++VL EIRP
Sbjct: 120 KLQGACSSCSASVTTMKMGIERRLMEKIPEIVAVEAISDEETGLELKEENIEKVLEEIRP 179

Query: 533 YLVGTGGGDLKLVAIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAA 685
           YLVG  GG L+LVAI+EPIVK+RITGPAAGVMTVRVAVTQKLREKIPAIAA
Sbjct: 180 YLVGAAGGSLELVAIEEPIVKIRITGPAAGVMTVRVAVTQKLREKIPAIAA 230


>gb|ACR38153.1| unknown [Zea mays] gi|413925507|gb|AFW65439.1| NFU3 [Zea mays]
          Length = 226

 Score =  288 bits (737), Expect = 1e-75
 Identities = 152/213 (71%), Positives = 172/213 (80%), Gaps = 6/213 (2%)
 Frame = +2

Query: 65  PSCSGTLLTFPPSFKNLGFNRTGISFRGISTCQLPK---SSLP---HRGRQVVKAVATPD 226
           PS S +  + P +F      R G++   +  C  P+   SS P    R RQVV+AVA PD
Sbjct: 15  PSASTSSSSSPSTF------RVGVASTAVRACSAPRLVASSAPLGCRRLRQVVQAVANPD 68

Query: 227 SALELPLTAENVESVLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGACGSCPSSIVTMKM 406
            A+ELPLTAENVE VLDEVRPYLMADGGNV LHEIDGNVVRLKLQGACGSCP+S+ TMKM
Sbjct: 69  PAIELPLTAENVEMVLDEVRPYLMADGGNVALHEIDGNVVRLKLQGACGSCPASVTTMKM 128

Query: 407 GIERRLMEAIPEIVAVEPLTDEETGLELNEENIDQVLGEIRPYLVGTGGGDLKLVAIDEP 586
           GIERRLME IPEIVAVEP+ DEETGLELN+ENI++VL EIRPYL GTGGG+L+ V I+EP
Sbjct: 129 GIERRLMEKIPEIVAVEPIADEETGLELNQENIEKVLDEIRPYLAGTGGGELEFVTIEEP 188

Query: 587 IVKVRITGPAAGVMTVRVAVTQKLREKIPAIAA 685
           IVKVR+TGPAAGVMTVRVA+TQKLREKIP IAA
Sbjct: 189 IVKVRLTGPAAGVMTVRVALTQKLREKIPKIAA 221


>dbj|BAK08356.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 227

 Score =  287 bits (734), Expect = 3e-75
 Identities = 148/187 (79%), Positives = 165/187 (88%)
 Frame = +2

Query: 125 RTGISFRGISTCQLPKSSLPHRGRQVVKAVATPDSALELPLTAENVESVLDEVRPYLMAD 304
           RTG+  R  ST +L  +    R RQVV+A+A PD A+ELPLTAENVE VLDEVRPYLMAD
Sbjct: 38  RTGV--RTSSTLRLVATPARRRRRQVVQAIANPDPAVELPLTAENVELVLDEVRPYLMAD 95

Query: 305 GGNVVLHEIDGNVVRLKLQGACGSCPSSIVTMKMGIERRLMEAIPEIVAVEPLTDEETGL 484
           GGNVVLHEIDGNVVRLKLQGACGSCP+S+ TMKMGIERRLME IPEIVAVEP+ DEETGL
Sbjct: 96  GGNVVLHEIDGNVVRLKLQGACGSCPASVTTMKMGIERRLMEKIPEIVAVEPIADEETGL 155

Query: 485 ELNEENIDQVLGEIRPYLVGTGGGDLKLVAIDEPIVKVRITGPAAGVMTVRVAVTQKLRE 664
           ELNEENI++VL EIRPYL GTGGG+L+ V+I+EPIVKVR+TGPAAGVMTVRVA+TQKLRE
Sbjct: 156 ELNEENIEKVLDEIRPYLSGTGGGELEFVSIEEPIVKVRLTGPAAGVMTVRVALTQKLRE 215

Query: 665 KIPAIAA 685
           KIP IAA
Sbjct: 216 KIPKIAA 222