BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006311
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6VAF7.1|TBB5_GOSHI RecName: Full=Tubulin beta-5 chain; AltNa...   221   6e-56
ref|XP_003594596.1| Tubulin beta chain [Medicago truncatula] gi|...   219   2e-55
gb|AEN19686.1| beta-tubulin [Cymbidium faberi]                        218   3e-55
ref|XP_002523174.1| tubulin beta chain, putative [Ricinus commun...   218   3e-55
ref|XP_002299042.1| tubulin, beta chain [Populus trichocarpa] gi...   218   3e-55

>sp|Q6VAF7.1|TBB5_GOSHI RecName: Full=Tubulin beta-5 chain; AltName: Full=Beta-5-tubulin
           gi|37529494|gb|AAQ92665.1| beta-tubulin 5 [Gossypium
           hirsutum]
          Length = 445

 Score =  221 bits (562), Expect = 6e-56
 Identities = 103/106 (97%), Positives = 105/106 (99%)
 Frame = -3

Query: 320 AKFWEVICDEHGIDGTGKYNGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSLR 141
           AKFWEVICDEHG+D TGKYNGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDS+R
Sbjct: 18  AKFWEVICDEHGVDNTGKYNGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVR 77

Query: 140 SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKE 3
           SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKE
Sbjct: 78  SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKE 123


>ref|XP_003594596.1| Tubulin beta chain [Medicago truncatula]
           gi|355483644|gb|AES64847.1| Tubulin beta chain [Medicago
           truncatula]
          Length = 445

 Score =  219 bits (557), Expect = 2e-55
 Identities = 103/106 (97%), Positives = 105/106 (99%)
 Frame = -3

Query: 320 AKFWEVICDEHGIDGTGKYNGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSLR 141
           AKFWEVICDEHGID TGKYNGDS+LQLERINVYYNEASGGRYVPRAVLMDLEPGTMDS+R
Sbjct: 18  AKFWEVICDEHGIDHTGKYNGDSELQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVR 77

Query: 140 SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKE 3
           SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKE
Sbjct: 78  SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKE 123


>gb|AEN19686.1| beta-tubulin [Cymbidium faberi]
          Length = 351

 Score =  218 bits (556), Expect = 3e-55
 Identities = 103/106 (97%), Positives = 105/106 (99%)
 Frame = -3

Query: 320 AKFWEVICDEHGIDGTGKYNGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSLR 141
           AKFWEVICDEHGID TGKY+GDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDS+R
Sbjct: 18  AKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVR 77

Query: 140 SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKE 3
           SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKE
Sbjct: 78  SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKE 123


>ref|XP_002523174.1| tubulin beta chain, putative [Ricinus communis]
           gi|223537581|gb|EEF39205.1| tubulin beta chain, putative
           [Ricinus communis]
          Length = 444

 Score =  218 bits (556), Expect = 3e-55
 Identities = 103/106 (97%), Positives = 105/106 (99%)
 Frame = -3

Query: 320 AKFWEVICDEHGIDGTGKYNGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSLR 141
           AKFWEVICDEHGID TGKY+GDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDS+R
Sbjct: 18  AKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVR 77

Query: 140 SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKE 3
           SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKE
Sbjct: 78  SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKE 123


>ref|XP_002299042.1| tubulin, beta chain [Populus trichocarpa]
           gi|222846300|gb|EEE83847.1| tubulin, beta chain [Populus
           trichocarpa]
          Length = 445

 Score =  218 bits (556), Expect = 3e-55
 Identities = 103/106 (97%), Positives = 105/106 (99%)
 Frame = -3

Query: 320 AKFWEVICDEHGIDGTGKYNGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSLR 141
           AKFWEVICDEHGID TGKY+GDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSLR
Sbjct: 18  AKFWEVICDEHGIDQTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSLR 77

Query: 140 SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKE 3
           SGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKE
Sbjct: 78  SGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKE 123