BLASTX nr result

ID: Coptis21_contig00006304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006304
         (1244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284591.1| PREDICTED: uncharacterized protein At1g47420...   243   6e-62
ref|XP_002510249.1| conserved hypothetical protein [Ricinus comm...   236   1e-59
ref|XP_002326924.1| predicted protein [Populus trichocarpa] gi|1...   235   2e-59
gb|ABK96322.1| unknown [Populus trichocarpa x Populus deltoides]      233   1e-58
ref|XP_004152731.1| PREDICTED: uncharacterized protein At1g47420...   232   1e-58

>ref|XP_002284591.1| PREDICTED: uncharacterized protein At1g47420, mitochondrial [Vitis
           vinifera] gi|147811478|emb|CAN63226.1| hypothetical
           protein VITISV_002665 [Vitis vinifera]
           gi|302142337|emb|CBI19540.3| unnamed protein product
           [Vitis vinifera]
          Length = 242

 Score =  243 bits (621), Expect = 6e-62
 Identities = 129/246 (52%), Positives = 163/246 (66%), Gaps = 2/246 (0%)
 Frame = +3

Query: 63  MEKIV--GSIYRSSTRRIQSSPRLSSITQLSNTTRHYSSNPFSIKPNRGRIFSQQPSFNQ 236
           ME++V   S++RS+  R   S R S++       RHY+S+            + + +   
Sbjct: 1   MERMVLLRSLFRSAAFR---SCRFSAVVNHHQQLRHYASSRSLFNLFAPTAIASRQALPS 57

Query: 237 VSFDCRPPFASSLGSMRSFSEDVSHMPVITDPDIKNAFMDLMAESWDELPNVIIHDAKKA 416
              DCR PFA S+GS RSFSEDVSH+PVI DP+I+  F DLMA SWDELP+ +I  A K 
Sbjct: 58  ---DCRTPFAVSIGSTRSFSEDVSHLPVIKDPEIQTVFKDLMAASWDELPDSVISSANKV 114

Query: 417 LSKSTDDKSGQEALTNVFRAAEAVEQFGSILITMKMELDDTIGMSGENVQPLSDEFSNAL 596
           LSK+TDDK+GQEAL NVFRAAEA  +FG IL+T++ME+DD +G+SGENV+PL DEF NAL
Sbjct: 115 LSKNTDDKAGQEALANVFRAAEAAVEFGGILVTLRMEIDDLVGISGENVKPLPDEFVNAL 174

Query: 597 CVVHERYIAYLDSFGPDEIYLRKKVETELGAKMIYFKMRCAGLDPEWXXXXXXXXXXXXX 776
             V +RY  YLDSFGPDE +LRKKVE ELG KMI+ K+RC+ L  EW             
Sbjct: 175 VTVFKRYTTYLDSFGPDEAFLRKKVEMELGTKMIHLKLRCSDLGAEWGKVTLLGTSGLSG 234

Query: 777 XYIEQR 794
            Y+EQR
Sbjct: 235 SYVEQR 240


>ref|XP_002510249.1| conserved hypothetical protein [Ricinus communis]
           gi|223550950|gb|EEF52436.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 238

 Score =  236 bits (601), Expect = 1e-59
 Identities = 132/247 (53%), Positives = 165/247 (66%), Gaps = 3/247 (1%)
 Frame = +3

Query: 63  MEK---IVGSIYRSSTRRIQSSPRLSSITQLSNTTRHYSSNPFSIKPNRGRIFSQQPSFN 233
           MEK   ++ SI R++  R  SS    + TQ      H SS+          IFS   S N
Sbjct: 1   MEKKMVLLRSICRAACFR--SSRIADAFTQHHLLPHHLSSSR--------SIFSLASSSN 50

Query: 234 QVSFDCRPPFASSLGSMRSFSEDVSHMPVITDPDIKNAFMDLMAESWDELPNVIIHDAKK 413
           +VS D    F+  +G+ R FSEDV+ +P I DP +K AF +LMA SWDELP+ +++D K 
Sbjct: 51  RVSSDFGYRFSMGVGNRRCFSEDVTRLPAIQDPQVKKAFKNLMAASWDELPDPLLYDVKI 110

Query: 414 ALSKSTDDKSGQEALTNVFRAAEAVEQFGSILITMKMELDDTIGMSGENVQPLSDEFSNA 593
           ALSK+TDDKSGQ+ L NVFRAAEAVE+FG IL+++KMELDD IG+SGENV+PLSDE++NA
Sbjct: 111 ALSKNTDDKSGQDILKNVFRAAEAVEEFGGILMSLKMELDDNIGLSGENVKPLSDEYANA 170

Query: 594 LCVVHERYIAYLDSFGPDEIYLRKKVETELGAKMIYFKMRCAGLDPEWXXXXXXXXXXXX 773
           L    +RY AYLD+FGPDE +LRKKVE ELG+KMIY KMRC+GLD  W            
Sbjct: 171 LRTAFQRYSAYLDAFGPDEGFLRKKVEMELGSKMIYLKMRCSGLDSAWGKVTVLGTSGLA 230

Query: 774 XXYIEQR 794
             YIEQR
Sbjct: 231 GSYIEQR 237


>ref|XP_002326924.1| predicted protein [Populus trichocarpa] gi|118481849|gb|ABK92861.1|
           unknown [Populus trichocarpa]
           gi|222835239|gb|EEE73674.1| predicted protein [Populus
           trichocarpa]
          Length = 239

 Score =  235 bits (600), Expect = 2e-59
 Identities = 116/187 (62%), Positives = 139/187 (74%)
 Frame = +3

Query: 234 QVSFDCRPPFASSLGSMRSFSEDVSHMPVITDPDIKNAFMDLMAESWDELPNVIIHDAKK 413
           ++  D R PFA SLGS RSFSEDV+H P I DP+I N F DLMA +WDELPN ++ DAKK
Sbjct: 52  RIPCDFRSPFAMSLGSSRSFSEDVTHFPDIKDPEILNVFKDLMATNWDELPNAVVSDAKK 111

Query: 414 ALSKSTDDKSGQEALTNVFRAAEAVEQFGSILITMKMELDDTIGMSGENVQPLSDEFSNA 593
           ALSK+TDDK GQE L NVFRAAEAVE+FG  ++++KMELDD IG+SGENV+PL +  +NA
Sbjct: 112 ALSKNTDDKVGQEILKNVFRAAEAVEEFGGKIMSLKMELDDIIGLSGENVKPLPELHANA 171

Query: 594 LCVVHERYIAYLDSFGPDEIYLRKKVETELGAKMIYFKMRCAGLDPEWXXXXXXXXXXXX 773
           +   ++RY AYLDSFGP E YLRKKVETELG++MIY KMRC GL  EW            
Sbjct: 172 IRTFYQRYAAYLDSFGPGEGYLRKKVETELGSRMIYLKMRCCGLGAEWGKVTVLGTSGLA 231

Query: 774 XXYIEQR 794
             Y+EQR
Sbjct: 232 GSYVEQR 238


>gb|ABK96322.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 239

 Score =  233 bits (593), Expect = 1e-58
 Identities = 114/187 (60%), Positives = 138/187 (73%)
 Frame = +3

Query: 234 QVSFDCRPPFASSLGSMRSFSEDVSHMPVITDPDIKNAFMDLMAESWDELPNVIIHDAKK 413
           ++  D R PFA SLGS R FSEDV+H P I DP+I N F DLMA +WDELPN ++ DAKK
Sbjct: 52  RIPCDFRSPFAMSLGSSRFFSEDVTHFPDIKDPEILNVFKDLMATNWDELPNAVVSDAKK 111

Query: 414 ALSKSTDDKSGQEALTNVFRAAEAVEQFGSILITMKMELDDTIGMSGENVQPLSDEFSNA 593
           ALSK+TDDK+GQ+ L NVFRAAEAVE+FG  ++++KMELDD IG+SGENV+PL +   NA
Sbjct: 112 ALSKNTDDKAGQDILKNVFRAAEAVEEFGGKIMSLKMELDDIIGLSGENVKPLPELHDNA 171

Query: 594 LCVVHERYIAYLDSFGPDEIYLRKKVETELGAKMIYFKMRCAGLDPEWXXXXXXXXXXXX 773
           +   ++RY AYLDSFGP E YLRKKVETELG++MIY KMRC GL  EW            
Sbjct: 172 IRTFYQRYAAYLDSFGPGEGYLRKKVETELGSRMIYLKMRCCGLGAEWGKVTVLGTSGLA 231

Query: 774 XXYIEQR 794
             Y+EQR
Sbjct: 232 GSYVEQR 238


>ref|XP_004152731.1| PREDICTED: uncharacterized protein At1g47420, mitochondrial-like
           [Cucumis sativus] gi|449496011|ref|XP_004160011.1|
           PREDICTED: uncharacterized protein At1g47420,
           mitochondrial-like [Cucumis sativus]
          Length = 241

 Score =  232 bits (592), Expect = 1e-58
 Identities = 130/246 (52%), Positives = 160/246 (65%), Gaps = 2/246 (0%)
 Frame = +3

Query: 63  MEKIVGSIYRSSTRRIQS-SPRLSSITQLSNT-TRHYSSNPFSIKPNRGRIFSQQPSFNQ 236
           MEK V  I RS  R +++ S  ++ +T  +   + H  +  F    +    FS  P   +
Sbjct: 1   MEKTV--ILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQ--R 56

Query: 237 VSFDCRPPFASSLGSMRSFSEDVSHMPVITDPDIKNAFMDLMAESWDELPNVIIHDAKKA 416
           VS DC  P  S +G  R FS DV  MP I DP ++N F DLMA SWD+LP  +I+D K A
Sbjct: 57  VSSDCSYP--SGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTA 114

Query: 417 LSKSTDDKSGQEALTNVFRAAEAVEQFGSILITMKMELDDTIGMSGENVQPLSDEFSNAL 596
           LS STDDK+G+E + NVFRAAEA E+FG +LI +KME+DD+IG+SGENV+PLSDE   AL
Sbjct: 115 LSGSTDDKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKAL 174

Query: 597 CVVHERYIAYLDSFGPDEIYLRKKVETELGAKMIYFKMRCAGLDPEWXXXXXXXXXXXXX 776
             VHERYIAYLDSFGP+E YLRKKVETELG KMIY KMRC+GL  EW             
Sbjct: 175 HTVHERYIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSG 234

Query: 777 XYIEQR 794
            Y+EQR
Sbjct: 235 SYVEQR 240


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