BLASTX nr result
ID: Coptis21_contig00006294
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00006294
(2049 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|2... 910 0.0
ref|XP_003539777.1| PREDICTED: ruBisCO large subunit-binding pro... 897 0.0
ref|XP_002313525.1| predicted protein [Populus trichocarpa] gi|2... 897 0.0
ref|XP_003538152.1| PREDICTED: ruBisCO large subunit-binding pro... 897 0.0
ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding pro... 895 0.0
>ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|222837676|gb|EEE76041.1|
predicted protein [Populus trichocarpa]
Length = 587
Score = 910 bits (2353), Expect = 0.0
Identities = 484/583 (83%), Positives = 519/583 (89%), Gaps = 2/583 (0%)
Frame = +1
Query: 109 MASANAISTASIFQTPKQGSLT--GRIDKGQRVNYGSSGSKFDVRASAKKIAFDQDSRTA 282
MA++NA+STASI +PKQG L G R+NYG S +F VRA+AK IAFDQ SR A
Sbjct: 1 MATSNALSTASILCSPKQGGLRRRGNQQNNSRLNYGLSSRRFSVRANAKDIAFDQKSRAA 60
Query: 283 IQSGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADAMENAGAALIRE 462
+QSGIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIEL D MENAGAALIRE
Sbjct: 61 LQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE 120
Query: 463 VASKTNDSAGDGTTTASVLAREIIQLGLLAVTSGANPVSIKKGIDKTVQGLVHKLEEKAR 642
VASKTNDSAGDGTTTASVLAREII+LGLL+VTSGANPVSIK+GIDKTVQGLV +LE+KAR
Sbjct: 121 VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKRGIDKTVQGLVEELEKKAR 180
Query: 643 PLKGHDDIKAIASISAGNDEIIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEID 822
P+KG DDIKA+ASISAGNDE+IGTMIADAIDKVGPDGVL GMEID
Sbjct: 181 PVKGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETVVEVEEGMEID 240
Query: 823 RGYISPQFVTSPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVSG 1002
RGYISPQFVT+PEKLI EFENARVL+TDQKI+AIKDIIPLLEKTTQLRAPLLIIAEDV+G
Sbjct: 241 RGYISPQFVTNPEKLICEFENARVLITDQKITAIKDIIPLLEKTTQLRAPLLIIAEDVTG 300
Query: 1003 EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIEKTDIEQ 1182
EALATLVVNKLRG+LNVAAIKAPGFGERRKA+LQDIAILTGAEFQASDLGL IE T IEQ
Sbjct: 301 EALATLVVNKLRGVLNVAAIKAPGFGERRKAMLQDIAILTGAEFQASDLGLSIENTSIEQ 360
Query: 1183 LGVARKVTVTKDSTTIIADAASKDEVQARIAQIKKELAETDSVYDSEKLAERIAKLSGGV 1362
LG+ARKVT++KDSTTIIADAASKDE+QARIAQ+KKEL+ETDSVYDSEKLAERIAKLSGGV
Sbjct: 361 LGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGV 420
Query: 1363 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSACVPAIKDKLEDA 1542
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLS CVPAIKDK+EDA
Sbjct: 421 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTCVPAIKDKIEDA 480
Query: 1543 DERLGADIVQKALVSPASLIAQNAXXXXXXXXXXXXASEWEVGYNAMTDTYENLMASGVI 1722
DERLGADIVQKALVSPASLIAQNA ASEWE+GYNAMTD YENLM +GVI
Sbjct: 481 DERLGADIVQKALVSPASLIAQNAGIEGEVVVEKLKASEWEIGYNAMTDKYENLMEAGVI 540
Query: 1723 DPAKVTRCALQNAASVAGMVLTTQAIVVEKPKDKSTTAAVPSG 1851
DPAKVTRCALQN+ASVAGMVLTTQAIVVEKPK K+ AA G
Sbjct: 541 DPAKVTRCALQNSASVAGMVLTTQAIVVEKPKPKTPAAAATQG 583
>ref|XP_003539777.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Glycine max]
Length = 584
Score = 897 bits (2319), Expect = 0.0
Identities = 471/584 (80%), Positives = 520/584 (89%)
Frame = +1
Query: 109 MASANAISTASIFQTPKQGSLTGRIDKGQRVNYGSSGSKFDVRASAKKIAFDQDSRTAIQ 288
MAS NA+S+ASI ++P + SLT R + RVNY ++F V+ASAK+IAFDQ SR+A+Q
Sbjct: 1 MASTNALSSASILRSPNRQSLTRRANHNGRVNYRKPNNRFSVKASAKEIAFDQHSRSAMQ 60
Query: 289 SGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADAMENAGAALIREVA 468
+GIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIEL D MENAGAALIREVA
Sbjct: 61 AGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVA 120
Query: 469 SKTNDSAGDGTTTASVLAREIIQLGLLAVTSGANPVSIKKGIDKTVQGLVHKLEEKARPL 648
SKTNDSAGDGTTTASVLAREII+LGLL+VTSGANPVS+K+GIDKTVQGLV +LE+KARP+
Sbjct: 121 SKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVQGLVEELEKKARPV 180
Query: 649 KGHDDIKAIASISAGNDEIIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRG 828
KG DDIKA+ASISAGNDE+IG MIA+AIDKVGPDGVL GMEIDRG
Sbjct: 181 KGGDDIKAVASISAGNDELIGQMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRG 240
Query: 829 YISPQFVTSPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVSGEA 1008
YISPQFVT+PEKLIVEFENARVL+TDQKISAIKDIIPLLEKTTQLRAPLLIIAEDV+GEA
Sbjct: 241 YISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEA 300
Query: 1009 LATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIEKTDIEQLG 1188
LATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLL+E T +EQLG
Sbjct: 301 LATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSVEQLG 360
Query: 1189 VARKVTVTKDSTTIIADAASKDEVQARIAQIKKELAETDSVYDSEKLAERIAKLSGGVAV 1368
+ARK+T++KDSTT+IADAA+KDE+QAR+AQ+KKEL++TDSVYD+EKLAERIAKLSGGVAV
Sbjct: 361 LARKITISKDSTTVIADAATKDELQARVAQLKKELSQTDSVYDTEKLAERIAKLSGGVAV 420
Query: 1369 IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSACVPAIKDKLEDADE 1548
IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG ALVHLS VPAIKDKLEDADE
Sbjct: 421 IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSTHVPAIKDKLEDADE 480
Query: 1549 RLGADIVQKALVSPASLIAQNAXXXXXXXXXXXXASEWEVGYNAMTDTYENLMASGVIDP 1728
RLGADIVQKAL++PA+LIAQNA + EWEVGYNAM D YENL+ +GVIDP
Sbjct: 481 RLGADIVQKALIAPAALIAQNAGIEGEVVVEKIKSGEWEVGYNAMADRYENLVEAGVIDP 540
Query: 1729 AKVTRCALQNAASVAGMVLTTQAIVVEKPKDKSTTAAVPSGLAV 1860
AKVTRCALQNAASVAGMVLTTQAIVVEKPK K+ A P GL V
Sbjct: 541 AKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAPVAGAPQGLTV 584
>ref|XP_002313525.1| predicted protein [Populus trichocarpa] gi|222849933|gb|EEE87480.1|
predicted protein [Populus trichocarpa]
Length = 586
Score = 897 bits (2319), Expect = 0.0
Identities = 479/586 (81%), Positives = 520/586 (88%), Gaps = 2/586 (0%)
Frame = +1
Query: 109 MASANAISTASIFQTPKQGSLT--GRIDKGQRVNYGSSGSKFDVRASAKKIAFDQDSRTA 282
MA++NA+STASI +PKQG L G R+N+G S +F VRA+AK IAFDQDSR A
Sbjct: 1 MATSNALSTASILCSPKQGGLRRKGNQQHNSRLNFGQSTRRFAVRANAKDIAFDQDSRAA 60
Query: 283 IQSGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADAMENAGAALIRE 462
+QSGIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIEL D MENAGAALIRE
Sbjct: 61 LQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE 120
Query: 463 VASKTNDSAGDGTTTASVLAREIIQLGLLAVTSGANPVSIKKGIDKTVQGLVHKLEEKAR 642
VASKTNDSAGDGTTTASVLAREII+LGLL+VTSGANPVSIKKGIDKTVQGLV +LE++AR
Sbjct: 121 VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVQGLVEELEKRAR 180
Query: 643 PLKGHDDIKAIASISAGNDEIIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEID 822
P+KG DDIKA+A+ISAGNDE+IGTMIADAIDKVGPDGVL GMEID
Sbjct: 181 PVKGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEID 240
Query: 823 RGYISPQFVTSPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVSG 1002
RGYISPQFVT+PEKLI FENARVLVTDQKISAIKDIIPLLEKTTQLR+PLLIIAEDV+G
Sbjct: 241 RGYISPQFVTNPEKLICVFENARVLVTDQKISAIKDIIPLLEKTTQLRSPLLIIAEDVTG 300
Query: 1003 EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIEKTDIEQ 1182
EALATLVVNKLRGILNV+AIKAPGFGERRKA+LQDIAILTGAEFQASDLGL IE T IEQ
Sbjct: 301 EALATLVVNKLRGILNVSAIKAPGFGERRKAMLQDIAILTGAEFQASDLGLSIENTSIEQ 360
Query: 1183 LGVARKVTVTKDSTTIIADAASKDEVQARIAQIKKELAETDSVYDSEKLAERIAKLSGGV 1362
LG+ARKVT++KDSTTIIADAASKDE+QARIAQ+KKEL+ETDSVYDSEKLAERIAKLSGGV
Sbjct: 361 LGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGV 420
Query: 1363 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSACVPAIKDKLEDA 1542
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLS VPAIK+K++DA
Sbjct: 421 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTHVPAIKEKIKDA 480
Query: 1543 DERLGADIVQKALVSPASLIAQNAXXXXXXXXXXXXASEWEVGYNAMTDTYENLMASGVI 1722
DERLGADIVQKALV+PASLIAQNA SEWE+GYNAMTD YENL+ +GVI
Sbjct: 481 DERLGADIVQKALVAPASLIAQNAGIEGEVVVEKLKESEWEMGYNAMTDKYENLVEAGVI 540
Query: 1723 DPAKVTRCALQNAASVAGMVLTTQAIVVEKPKDKSTTAAVPSGLAV 1860
DPAKVTRCALQN+ASVAGMVLTTQAIVVEKPK ++ AA P GL V
Sbjct: 541 DPAKVTRCALQNSASVAGMVLTTQAIVVEKPKPRTPAAASPQGLTV 586
>ref|XP_003538152.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like isoform 1 [Glycine max]
Length = 584
Score = 897 bits (2318), Expect = 0.0
Identities = 471/584 (80%), Positives = 520/584 (89%)
Frame = +1
Query: 109 MASANAISTASIFQTPKQGSLTGRIDKGQRVNYGSSGSKFDVRASAKKIAFDQDSRTAIQ 288
MAS NA+S+ASI ++P + SLT R + RVNY S+F V+ASAK+IAFDQ SR+A+Q
Sbjct: 1 MASTNALSSASILRSPNRQSLTRRANHNGRVNYRQPNSRFSVKASAKEIAFDQHSRSAMQ 60
Query: 289 SGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADAMENAGAALIREVA 468
+GIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIEL D MENAGAALIREVA
Sbjct: 61 AGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVA 120
Query: 469 SKTNDSAGDGTTTASVLAREIIQLGLLAVTSGANPVSIKKGIDKTVQGLVHKLEEKARPL 648
SKTNDSAGDGTTTASVLAREII+LGLL+VTSGANPVS+K+GIDKTVQGLV +LE+KARP+
Sbjct: 121 SKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVQGLVEELEKKARPV 180
Query: 649 KGHDDIKAIASISAGNDEIIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRG 828
KG DDIKA+ASISAGNDE+IG MIA+AIDKVGPDGVL GMEIDRG
Sbjct: 181 KGGDDIKAVASISAGNDELIGQMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRG 240
Query: 829 YISPQFVTSPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVSGEA 1008
YISPQFVT+PEKLIVEFENARVL+TDQKISAIKDIIPLLEKTTQLRAPLLIIAEDV+GEA
Sbjct: 241 YISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEA 300
Query: 1009 LATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIEKTDIEQLG 1188
LATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLL+E T +EQLG
Sbjct: 301 LATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSVEQLG 360
Query: 1189 VARKVTVTKDSTTIIADAASKDEVQARIAQIKKELAETDSVYDSEKLAERIAKLSGGVAV 1368
+ARK+T++KDSTTIIADAA+KDE+QAR+AQ+KKEL++TDSVYD+EKLAERIAKLSGGVAV
Sbjct: 361 LARKITISKDSTTIIADAATKDELQARVAQLKKELSQTDSVYDTEKLAERIAKLSGGVAV 420
Query: 1369 IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSACVPAIKDKLEDADE 1548
IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG ALVHLS VPA+KDKL+DADE
Sbjct: 421 IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSTHVPALKDKLDDADE 480
Query: 1549 RLGADIVQKALVSPASLIAQNAXXXXXXXXXXXXASEWEVGYNAMTDTYENLMASGVIDP 1728
RLGADIVQKAL++PA+LIAQNA + EWEVGYNAM D YENL+ +GVIDP
Sbjct: 481 RLGADIVQKALIAPAALIAQNAGIEGEVVVEKIKSGEWEVGYNAMVDRYENLVEAGVIDP 540
Query: 1729 AKVTRCALQNAASVAGMVLTTQAIVVEKPKDKSTTAAVPSGLAV 1860
AKVTRCALQNAASVAGMVLTTQAIVVEKPK K+ A P GL V
Sbjct: 541 AKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAPVAGAPQGLTV 584
>ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Vitis vinifera]
Length = 586
Score = 895 bits (2312), Expect = 0.0
Identities = 479/586 (81%), Positives = 518/586 (88%), Gaps = 2/586 (0%)
Frame = +1
Query: 109 MASANAISTASIFQTPKQGSLTGRIDK--GQRVNYGSSGSKFDVRASAKKIAFDQDSRTA 282
MASANAISTASI ++PKQ S R+++ G + NY S ++F VRASAK+IAFDQ SR A
Sbjct: 1 MASANAISTASIIRSPKQESFRRRVNQQQGPKFNYRPSNNRFVVRASAKEIAFDQSSRAA 60
Query: 283 IQSGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADAMENAGAALIRE 462
+Q+GIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIELADAMENAGAALIRE
Sbjct: 61 LQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADAMENAGAALIRE 120
Query: 463 VASKTNDSAGDGTTTASVLAREIIQLGLLAVTSGANPVSIKKGIDKTVQGLVHKLEEKAR 642
VASKTNDSAGDGTTTASVLAREII+LGLL+VTSGANPVSIKKGIDKTV LV +LE+KAR
Sbjct: 121 VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVHELVKELEKKAR 180
Query: 643 PLKGHDDIKAIASISAGNDEIIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEID 822
P++G DDIKA+ASISAGNDE IG+MIADAI+KVGPDGVL GMEID
Sbjct: 181 PVEGGDDIKAVASISAGNDEFIGSMIADAINKVGPDGVLSIESSSSFETTVDVEEGMEID 240
Query: 823 RGYISPQFVTSPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVSG 1002
RGYISPQFVT+PEKLI EFENARVLVTDQKI+ IKDIIPLLEKTTQLR+PLLI+AEDV+G
Sbjct: 241 RGYISPQFVTNPEKLIAEFENARVLVTDQKITTIKDIIPLLEKTTQLRSPLLIVAEDVTG 300
Query: 1003 EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIEKTDIEQ 1182
EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAI+TGAEFQA+DLGLLIE T +EQ
Sbjct: 301 EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIMTGAEFQANDLGLLIENTSVEQ 360
Query: 1183 LGVARKVTVTKDSTTIIADAASKDEVQARIAQIKKELAETDSVYDSEKLAERIAKLSGGV 1362
LG+ARKVT+TKDSTTIIADAASKDE+QARIAQIKKELAETDSVYD+EKLAERIAKLSGGV
Sbjct: 361 LGLARKVTITKDSTTIIADAASKDEIQARIAQIKKELAETDSVYDTEKLAERIAKLSGGV 420
Query: 1363 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSACVPAIKDKLEDA 1542
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAA VHLS VPAIKDKLEDA
Sbjct: 421 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLSTYVPAIKDKLEDA 480
Query: 1543 DERLGADIVQKALVSPASLIAQNAXXXXXXXXXXXXASEWEVGYNAMTDTYENLMASGVI 1722
DERLGADIVQKALV+PASLIA NA A EW VGYNAMTD YENL+ +GVI
Sbjct: 481 DERLGADIVQKALVAPASLIAHNAGVEGEVVVEKIKACEWAVGYNAMTDKYENLVEAGVI 540
Query: 1723 DPAKVTRCALQNAASVAGMVLTTQAIVVEKPKDKSTTAAVPSGLAV 1860
DPAKV RCALQNAASVAGMVLTTQAIVVEK K K+ AA P GL +
Sbjct: 541 DPAKVARCALQNAASVAGMVLTTQAIVVEKAKPKAPVAAPPQGLTI 586