BLASTX nr result

ID: Coptis21_contig00006278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006278
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24378.1| unknown [Picea sitchensis]                             234   9e-60
gb|EEE55196.1| hypothetical protein OsJ_03042 [Oryza sativa Japo...   233   1e-59
ref|NP_001043900.1| Os01g0685800 [Oryza sativa Japonica Group] g...   233   1e-59
dbj|BAD82521.1| putative ATP synthase beta subunit [Oryza sativa...   233   1e-59
dbj|BAD82522.1| putative ATP synthase beta subunit [Oryza sativa...   233   1e-59

>gb|ABK24378.1| unknown [Picea sitchensis]
          Length = 568

 Score =  234 bits (596), Expect = 9e-60
 Identities = 116/120 (96%), Positives = 118/120 (98%)
 Frame = -1

Query: 564 AVDPLDSTSRMLSPHILGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVAR 385
           AVDPLDSTSRMLSPHILGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTV+R
Sbjct: 434 AVDPLDSTSRMLSPHILGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVSR 493

Query: 384 ARKIQRFLSQPFHVAEVFTGTPGKYVELKESIASFQGVLDGKYDDLPEQSFYTVGGIDEV 205
           ARKIQRFLSQPFHVAEVFTG PGKYV+LKESIASFQGVLDGKYDDLPEQSFY VGGIDEV
Sbjct: 494 ARKIQRFLSQPFHVAEVFTGAPGKYVDLKESIASFQGVLDGKYDDLPEQSFYMVGGIDEV 553


>gb|EEE55196.1| hypothetical protein OsJ_03042 [Oryza sativa Japonica Group]
          Length = 480

 Score =  233 bits (595), Expect = 1e-59
 Identities = 115/120 (95%), Positives = 117/120 (97%)
 Frame = -1

Query: 564 AVDPLDSTSRMLSPHILGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVAR 385
           AVDPLDSTSRMLSPH+LGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVAR
Sbjct: 348 AVDPLDSTSRMLSPHVLGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVAR 407

Query: 384 ARKIQRFLSQPFHVAEVFTGTPGKYVELKESIASFQGVLDGKYDDLPEQSFYTVGGIDEV 205
           ARKIQRFLSQPFHVAEVFTG PGKYVELKES+ SFQGVLDGKYDDLPEQSFY VGGIDEV
Sbjct: 408 ARKIQRFLSQPFHVAEVFTGAPGKYVELKESVQSFQGVLDGKYDDLPEQSFYMVGGIDEV 467


>ref|NP_001043900.1| Os01g0685800 [Oryza sativa Japonica Group]
           gi|113533431|dbj|BAF05814.1| Os01g0685800 [Oryza sativa
           Japonica Group]
          Length = 557

 Score =  233 bits (595), Expect = 1e-59
 Identities = 115/120 (95%), Positives = 117/120 (97%)
 Frame = -1

Query: 564 AVDPLDSTSRMLSPHILGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVAR 385
           AVDPLDSTSRMLSPH+LGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVAR
Sbjct: 425 AVDPLDSTSRMLSPHVLGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVAR 484

Query: 384 ARKIQRFLSQPFHVAEVFTGTPGKYVELKESIASFQGVLDGKYDDLPEQSFYTVGGIDEV 205
           ARKIQRFLSQPFHVAEVFTG PGKYVELKES+ SFQGVLDGKYDDLPEQSFY VGGIDEV
Sbjct: 485 ARKIQRFLSQPFHVAEVFTGAPGKYVELKESVQSFQGVLDGKYDDLPEQSFYMVGGIDEV 544


>dbj|BAD82521.1| putative ATP synthase beta subunit [Oryza sativa Japonica Group]
          Length = 425

 Score =  233 bits (595), Expect = 1e-59
 Identities = 115/120 (95%), Positives = 117/120 (97%)
 Frame = -1

Query: 564 AVDPLDSTSRMLSPHILGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVAR 385
           AVDPLDSTSRMLSPH+LGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVAR
Sbjct: 293 AVDPLDSTSRMLSPHVLGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVAR 352

Query: 384 ARKIQRFLSQPFHVAEVFTGTPGKYVELKESIASFQGVLDGKYDDLPEQSFYTVGGIDEV 205
           ARKIQRFLSQPFHVAEVFTG PGKYVELKES+ SFQGVLDGKYDDLPEQSFY VGGIDEV
Sbjct: 353 ARKIQRFLSQPFHVAEVFTGAPGKYVELKESVQSFQGVLDGKYDDLPEQSFYMVGGIDEV 412


>dbj|BAD82522.1| putative ATP synthase beta subunit [Oryza sativa Japonica Group]
          Length = 419

 Score =  233 bits (595), Expect = 1e-59
 Identities = 115/120 (95%), Positives = 117/120 (97%)
 Frame = -1

Query: 564 AVDPLDSTSRMLSPHILGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVAR 385
           AVDPLDSTSRMLSPH+LGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVAR
Sbjct: 287 AVDPLDSTSRMLSPHVLGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVAR 346

Query: 384 ARKIQRFLSQPFHVAEVFTGTPGKYVELKESIASFQGVLDGKYDDLPEQSFYTVGGIDEV 205
           ARKIQRFLSQPFHVAEVFTG PGKYVELKES+ SFQGVLDGKYDDLPEQSFY VGGIDEV
Sbjct: 347 ARKIQRFLSQPFHVAEVFTGAPGKYVELKESVQSFQGVLDGKYDDLPEQSFYMVGGIDEV 406


Top