BLASTX nr result

ID: Coptis21_contig00006272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006272
         (1431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278896.1| PREDICTED: uncharacterized membrane protein ...   409   e-111
ref|XP_002304343.1| predicted protein [Populus trichocarpa] gi|1...   397   e-108
ref|XP_002527655.1| conserved hypothetical protein [Ricinus comm...   396   e-108
ref|XP_002326733.1| predicted protein [Populus trichocarpa] gi|2...   394   e-107
ref|NP_001239635.1| uncharacterized protein LOC100793859 [Glycin...   393   e-107

>ref|XP_002278896.1| PREDICTED: uncharacterized membrane protein At4g09580 [Vitis
            vinifera]
          Length = 254

 Score =  409 bits (1050), Expect = e-111
 Identities = 203/242 (83%), Positives = 218/242 (90%)
 Frame = +2

Query: 320  NNNNKFPLSFWEXXXXXXXXXXXXXXXXCVYLTMPASDYSFLKLPRTLEDLQILRDHLED 499
            N   +FPL+FWE                CVYLTMPASDYSFLKLPR+LED+QILRDHLED
Sbjct: 12   NVEGRFPLTFWEVTGASAVVGAFVLGLACVYLTMPASDYSFLKLPRSLEDIQILRDHLED 71

Query: 500  YTSDYTIQVLVGYCLVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCY 679
            YTSDYT+QVLVGYC+VYIFMQTFMIPGTVFMSLLAG+LFGVFKGVALVVFTATAGASSCY
Sbjct: 72   YTSDYTVQVLVGYCMVYIFMQTFMIPGTVFMSLLAGSLFGVFKGVALVVFTATAGASSCY 131

Query: 680  FLSKLIGRPLVFALWPDKMSFFQTQVAKRRKGLLNYMLFLRVTPTLPNTFINLASPIVDV 859
            FLSKLIGRPLV  LWPDK+SFFQ QVAKRR+ LLNYMLFLRVTPTLPNTFIN+ASP+VDV
Sbjct: 132  FLSKLIGRPLVSFLWPDKLSFFQAQVAKRRERLLNYMLFLRVTPTLPNTFINVASPMVDV 191

Query: 860  PYHIFFLATFIGLIPAAYLTVRAGIALGDLRSIGDLYDFQAIATLFLIGVVSVTPTLMSK 1039
            PYHIFFLATFIGLIPAAY+TVRAGIALG+LRS+GDLYDFQ+IATLFLIGVVSVTPTLMSK
Sbjct: 192  PYHIFFLATFIGLIPAAYVTVRAGIALGELRSVGDLYDFQSIATLFLIGVVSVTPTLMSK 251

Query: 1040 RK 1045
             K
Sbjct: 252  NK 253


>ref|XP_002304343.1| predicted protein [Populus trichocarpa] gi|118488236|gb|ABK95937.1|
            unknown [Populus trichocarpa] gi|222841775|gb|EEE79322.1|
            predicted protein [Populus trichocarpa]
          Length = 249

 Score =  397 bits (1021), Expect = e-108
 Identities = 199/246 (80%), Positives = 215/246 (87%)
 Frame = +2

Query: 308  GPTNNNNNKFPLSFWEXXXXXXXXXXXXXXXXCVYLTMPASDYSFLKLPRTLEDLQILRD 487
            G   N  ++FPLSFWE                 VYLTMPASDYSFLKLPRTLEDLQILRD
Sbjct: 3    GKGGNVGSRFPLSFWEVGAASSVVLGFVLCLLGVYLTMPASDYSFLKLPRTLEDLQILRD 62

Query: 488  HLEDYTSDYTIQVLVGYCLVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGA 667
            HLE YT DYT QVLVGYC+VYIFMQTFMIPGTVFMSLLAGALFGV KGVALVVFTATAGA
Sbjct: 63   HLETYTIDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVLKGVALVVFTATAGA 122

Query: 668  SSCYFLSKLIGRPLVFALWPDKMSFFQTQVAKRRKGLLNYMLFLRVTPTLPNTFINLASP 847
            SSCYFLSKLIGRPLVF+LWPDK+SFFQ QVA+RR GLLNYMLFLR+TPTLPNTFIN+ASP
Sbjct: 123  SSCYFLSKLIGRPLVFSLWPDKLSFFQEQVARRRGGLLNYMLFLRLTPTLPNTFINVASP 182

Query: 848  IVDVPYHIFFLATFIGLIPAAYLTVRAGIALGDLRSIGDLYDFQAIATLFLIGVVSVTPT 1027
            IVDVPYHIFFLAT IGLIPAAY+TV+AGIALG+L+SIGDLYDF +IATLFLIG++S+TPT
Sbjct: 183  IVDVPYHIFFLATLIGLIPAAYVTVKAGIALGELQSIGDLYDFNSIATLFLIGIISITPT 242

Query: 1028 LMSKRK 1045
            LMSK K
Sbjct: 243  LMSKSK 248


>ref|XP_002527655.1| conserved hypothetical protein [Ricinus communis]
            gi|223532960|gb|EEF34726.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 263

 Score =  396 bits (1018), Expect = e-108
 Identities = 198/262 (75%), Positives = 223/262 (85%), Gaps = 6/262 (2%)
 Frame = +2

Query: 278  IDVDSSRTSVGPTNNNNNK------FPLSFWEXXXXXXXXXXXXXXXXCVYLTMPASDYS 439
            ++ +++R   G  NN  N+      FPLSFWE                 VYLTMP SDYS
Sbjct: 1    METENARIGGGDGNNKKNEGIYGSGFPLSFWEVTVAATVVFGFVVGLLGVYLTMPPSDYS 60

Query: 440  FLKLPRTLEDLQILRDHLEDYTSDYTIQVLVGYCLVYIFMQTFMIPGTVFMSLLAGALFG 619
            FLKLPR+L+DLQILRDHLE YTSDYT QVL+GYC+VYIFMQTFMIPGTVFMSLLAGALFG
Sbjct: 61   FLKLPRSLQDLQILRDHLETYTSDYTAQVLIGYCVVYIFMQTFMIPGTVFMSLLAGALFG 120

Query: 620  VFKGVALVVFTATAGASSCYFLSKLIGRPLVFALWPDKMSFFQTQVAKRRKGLLNYMLFL 799
            VFKGVALVVFTATAGASSCYFLSK+IGRPLVF+LWPDK+SFFQ QVA+R+  LLNYMLFL
Sbjct: 121  VFKGVALVVFTATAGASSCYFLSKVIGRPLVFSLWPDKLSFFQEQVARRKDSLLNYMLFL 180

Query: 800  RVTPTLPNTFINLASPIVDVPYHIFFLATFIGLIPAAYLTVRAGIALGDLRSIGDLYDFQ 979
            R+TPTLPNTFIN+ASPIVDVPYHIFFLATFIGLIPAAY+TV+AGIALG+L+S+GDLYDF 
Sbjct: 181  RLTPTLPNTFINVASPIVDVPYHIFFLATFIGLIPAAYVTVKAGIALGELQSLGDLYDFN 240

Query: 980  AIATLFLIGVVSVTPTLMSKRK 1045
            ++ATLFLIGVVS+TPTLMSK K
Sbjct: 241  SVATLFLIGVVSITPTLMSKSK 262


>ref|XP_002326733.1| predicted protein [Populus trichocarpa] gi|222834055|gb|EEE72532.1|
            predicted protein [Populus trichocarpa]
          Length = 249

 Score =  394 bits (1011), Expect = e-107
 Identities = 197/246 (80%), Positives = 215/246 (87%)
 Frame = +2

Query: 308  GPTNNNNNKFPLSFWEXXXXXXXXXXXXXXXXCVYLTMPASDYSFLKLPRTLEDLQILRD 487
            G   +  ++FPLS WE                 VYLTMP SDYSFLKLPRTLEDLQILRD
Sbjct: 3    GKGGHVGSRFPLSSWEVAAASSVLLGFVLGLLGVYLTMPESDYSFLKLPRTLEDLQILRD 62

Query: 488  HLEDYTSDYTIQVLVGYCLVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGA 667
            HLE YTSDYT QVLVGYC+VYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGA
Sbjct: 63   HLETYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGA 122

Query: 668  SSCYFLSKLIGRPLVFALWPDKMSFFQTQVAKRRKGLLNYMLFLRVTPTLPNTFINLASP 847
            SSCYFLSKLIGRPLVF+LWPDK+SFFQ QVA+RR GLLNYMLFLR+TPTLPNTFIN+ASP
Sbjct: 123  SSCYFLSKLIGRPLVFSLWPDKLSFFQEQVARRRGGLLNYMLFLRLTPTLPNTFINVASP 182

Query: 848  IVDVPYHIFFLATFIGLIPAAYLTVRAGIALGDLRSIGDLYDFQAIATLFLIGVVSVTPT 1027
            IVDVPYHIFFLAT IGL+PAAY+TV+AGIALG+L+SIGDLYDF +IATLFLIG+VS+TPT
Sbjct: 183  IVDVPYHIFFLATLIGLVPAAYVTVKAGIALGELQSIGDLYDFNSIATLFLIGIVSITPT 242

Query: 1028 LMSKRK 1045
            L+SK K
Sbjct: 243  LISKSK 248


>ref|NP_001239635.1| uncharacterized protein LOC100793859 [Glycine max]
            gi|255645945|gb|ACU23461.1| unknown [Glycine max]
          Length = 258

 Score =  393 bits (1009), Expect = e-107
 Identities = 202/262 (77%), Positives = 223/262 (85%)
 Frame = +2

Query: 260  MGKRAEIDVDSSRTSVGPTNNNNNKFPLSFWEXXXXXXXXXXXXXXXXCVYLTMPASDYS 439
            MGK+    V+    SV PT +   KFPLSFWE                 VYLTMP SDYS
Sbjct: 1    MGKQGLNTVEQQ--SVAPTAS---KFPLSFWEATVASTVALVFAVGLLGVYLTMPDSDYS 55

Query: 440  FLKLPRTLEDLQILRDHLEDYTSDYTIQVLVGYCLVYIFMQTFMIPGTVFMSLLAGALFG 619
            FLKLPRTLEDLQ+LRD+LE YTSDYT QVLVGYC+VYIFMQTFMIPGTVFMSLLAGALFG
Sbjct: 56   FLKLPRTLEDLQLLRDNLESYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFG 115

Query: 620  VFKGVALVVFTATAGASSCYFLSKLIGRPLVFALWPDKMSFFQTQVAKRRKGLLNYMLFL 799
            VFKGVALVVFTATAGASSCYFLSKLIGRP++ +LWP+K+ FFQTQVAKRRKGLLNYMLFL
Sbjct: 116  VFKGVALVVFTATAGASSCYFLSKLIGRPILSSLWPEKLKFFQTQVAKRRKGLLNYMLFL 175

Query: 800  RVTPTLPNTFINLASPIVDVPYHIFFLATFIGLIPAAYLTVRAGIALGDLRSIGDLYDFQ 979
            R+TPTLPNTFIN ASPIVDVPYHIFFLAT IGLIPAAY+TV+AG+ALG+L+S+GDLYDF 
Sbjct: 176  RLTPTLPNTFINFASPIVDVPYHIFFLATVIGLIPAAYVTVKAGLALGELQSVGDLYDFN 235

Query: 980  AIATLFLIGVVSVTPTLMSKRK 1045
            +IATLFLIGVVSVTPTL+SK +
Sbjct: 236  SIATLFLIGVVSVTPTLISKNE 257


Top