BLASTX nr result

ID: Coptis21_contig00006271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006271
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276752.1| PREDICTED: uncharacterized protein LOC100259...   110   1e-22
emb|CAN81117.1| hypothetical protein VITISV_005903 [Vitis vinifera]   110   1e-22
ref|XP_002315291.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_002326586.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_002534301.1| conserved hypothetical protein [Ricinus comm...   107   8e-22

>ref|XP_002276752.1| PREDICTED: uncharacterized protein LOC100259846 [Vitis vinifera]
           gi|296086048|emb|CBI31489.3| unnamed protein product
           [Vitis vinifera]
          Length = 358

 Score =  110 bits (275), Expect = 1e-22
 Identities = 60/101 (59%), Positives = 73/101 (72%), Gaps = 6/101 (5%)
 Frame = +1

Query: 1   SWFVAVHVAVPFIAMLRKSVLMPKTAMAITIAASIVGQIIGSRAERIRLKSV------YA 162
           SWF AVH AVPFIAMLRKSVLMPKTAMA TIAASI+GQ+IGSRAERIR+K+V       A
Sbjct: 253 SWFAAVHAAVPFIAMLRKSVLMPKTAMAFTIAASILGQVIGSRAERIRMKTVASRRLNLA 312

Query: 163 EKKIKTSVSSSNQLQAVGVKSKPCNELMQWDQLLLKASGHS 285
           E  +  S S   Q+Q VGV+   C + ++WD + L+ +G S
Sbjct: 313 ENSVVGS-SQMTQIQVVGVQGGHCGKSVEWDPVALQVAGPS 352


>emb|CAN81117.1| hypothetical protein VITISV_005903 [Vitis vinifera]
          Length = 584

 Score =  110 bits (275), Expect = 1e-22
 Identities = 60/101 (59%), Positives = 73/101 (72%), Gaps = 6/101 (5%)
 Frame = +1

Query: 1   SWFVAVHVAVPFIAMLRKSVLMPKTAMAITIAASIVGQIIGSRAERIRLKSV------YA 162
           SWF AVH AVPFIAMLRKSVLMPKTAMA TIAASI+GQ+IGSRAERIR+K+V       A
Sbjct: 479 SWFAAVHAAVPFIAMLRKSVLMPKTAMAFTIAASILGQVIGSRAERIRMKTVASRRLNLA 538

Query: 163 EKKIKTSVSSSNQLQAVGVKSKPCNELMQWDQLLLKASGHS 285
           E  +  S S   Q+Q VGV+   C + ++WD + L+ +G S
Sbjct: 539 ENSVVGS-SQMTQIQVVGVQGGHCGKSVEWDPVALQVAGPS 578


>ref|XP_002315291.1| predicted protein [Populus trichocarpa] gi|222864331|gb|EEF01462.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score =  109 bits (272), Expect = 3e-22
 Identities = 60/101 (59%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
 Frame = +1

Query: 1   SWFVAVHVAVPFIAMLRKSVLMPKTAMAITIAASIVGQIIGSRAERIRLKSVYAEKK--I 174
           SWF AVH AVPFIAMLRKS+LMPK+AMA+TI ASI+GQ+IGSRAER RLK+V A++    
Sbjct: 248 SWFAAVHAAVPFIAMLRKSILMPKSAMALTIGASILGQVIGSRAERYRLKAVAAKRMPLA 307

Query: 175 KTSVSSSNQLQAVGVKSKPCNELMQWDQLLLKASGHSGDDA 297
           +T  SSS+QLQ V VKS  C  L+++  + L+ +G+S   A
Sbjct: 308 ETPASSSSQLQVVAVKSGHCGALVEY-PVSLQMAGNSSSAA 347


>ref|XP_002326586.1| predicted protein [Populus trichocarpa] gi|222833908|gb|EEE72385.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  109 bits (272), Expect = 3e-22
 Identities = 61/107 (57%), Positives = 76/107 (71%), Gaps = 7/107 (6%)
 Frame = +1

Query: 4   WFVAVHVAVPFIAMLRKSVLMPKTAMAITIAASIVGQIIGSRAERIRLKSVYAEK--KIK 177
           WF AVH AVPFIAMLRKSVLMPKTAMA+TI ASI+GQIIGSRAER RLK+V +++  K+K
Sbjct: 254 WFAAVHAAVPFIAMLRKSVLMPKTAMALTIGASILGQIIGSRAERHRLKTVASKERLKVK 313

Query: 178 TSVSSS----NQLQAVGVKSKPCNELMQWDQLLLKASG-HSGDDACY 303
           T+++++    +  Q  G     C   M WD LL+KASG  S    C+
Sbjct: 314 TAIAAAVDRYSPSQVSGNAGSNCGTEMSWDPLLIKASGSKSSTSVCF 360


>ref|XP_002534301.1| conserved hypothetical protein [Ricinus communis]
           gi|223525545|gb|EEF28083.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 350

 Score =  107 bits (268), Expect = 8e-22
 Identities = 58/103 (56%), Positives = 75/103 (72%), Gaps = 3/103 (2%)
 Frame = +1

Query: 1   SWFVAVHVAVPFIAMLRKSVLMPKTAMAITIAASIVGQIIGSRAERIRLKSVYAEKK--I 174
           SWF AVH AVPFIAMLRKSVLMPK+AMA TIAAS++GQ+IGSRAER RLK+  A+K    
Sbjct: 248 SWFAAVHAAVPFIAMLRKSVLMPKSAMAFTIAASVLGQVIGSRAERYRLKAAAAKKMSLA 307

Query: 175 KTSVSSSNQLQAVGVKSKPCNELMQWD-QLLLKASGHSGDDAC 300
           +TSV +S++ QAV VK + C + +++   L +  +  S D  C
Sbjct: 308 ETSVDASSEFQAVAVKGRCCGDFVKYPASLQVTGTSSSADVFC 350


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