BLASTX nr result

ID: Coptis21_contig00006270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006270
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276752.1| PREDICTED: uncharacterized protein LOC100259...   119   2e-25
emb|CAN81117.1| hypothetical protein VITISV_005903 [Vitis vinifera]   119   2e-25
ref|XP_002315291.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002326586.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_002264517.1| PREDICTED: uncharacterized protein LOC100261...   110   9e-23

>ref|XP_002276752.1| PREDICTED: uncharacterized protein LOC100259846 [Vitis vinifera]
           gi|296086048|emb|CBI31489.3| unnamed protein product
           [Vitis vinifera]
          Length = 358

 Score =  119 bits (299), Expect = 2e-25
 Identities = 63/105 (60%), Positives = 80/105 (76%), Gaps = 6/105 (5%)
 Frame = +1

Query: 1   SWFVAVHAAVPFIAMLRKSVLMPKTAMAITIAASIVGQIIGSRAERIRLKSVYAEKKLKT 180
           SWF AVHAAVPFIAMLRKSVLMPKTAMA TIAASI+GQ+IGSRAERIR+K+V A ++L  
Sbjct: 253 SWFAAVHAAVPFIAMLRKSVLMPKTAMAFTIAASILGQVIGSRAERIRMKTV-ASRRLNL 311

Query: 181 SVSS------SNQLQAVGVKSGPCNELMQWDPLLLKASGHSGDDV 297
           + +S        Q+Q VGV+ G C + ++WDP+ L+ +G S  +V
Sbjct: 312 AENSVVGSSQMTQIQVVGVQGGHCGKSVEWDPVALQVAGPSSPNV 356


>emb|CAN81117.1| hypothetical protein VITISV_005903 [Vitis vinifera]
          Length = 584

 Score =  119 bits (299), Expect = 2e-25
 Identities = 63/105 (60%), Positives = 80/105 (76%), Gaps = 6/105 (5%)
 Frame = +1

Query: 1   SWFVAVHAAVPFIAMLRKSVLMPKTAMAITIAASIVGQIIGSRAERIRLKSVYAEKKLKT 180
           SWF AVHAAVPFIAMLRKSVLMPKTAMA TIAASI+GQ+IGSRAERIR+K+V A ++L  
Sbjct: 479 SWFAAVHAAVPFIAMLRKSVLMPKTAMAFTIAASILGQVIGSRAERIRMKTV-ASRRLNL 537

Query: 181 SVSS------SNQLQAVGVKSGPCNELMQWDPLLLKASGHSGDDV 297
           + +S        Q+Q VGV+ G C + ++WDP+ L+ +G S  +V
Sbjct: 538 AENSVVGSSQMTQIQVVGVQGGHCGKSVEWDPVALQVAGPSSPNV 582


>ref|XP_002315291.1| predicted protein [Populus trichocarpa] gi|222864331|gb|EEF01462.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score =  116 bits (290), Expect = 2e-24
 Identities = 62/97 (63%), Positives = 79/97 (81%), Gaps = 2/97 (2%)
 Frame = +1

Query: 1   SWFVAVHAAVPFIAMLRKSVLMPKTAMAITIAASIVGQIIGSRAERIRLKSVYAEKK--L 174
           SWF AVHAAVPFIAMLRKS+LMPK+AMA+TI ASI+GQ+IGSRAER RLK+V A++    
Sbjct: 248 SWFAAVHAAVPFIAMLRKSILMPKSAMALTIGASILGQVIGSRAERYRLKAVAAKRMPLA 307

Query: 175 KTSVSSSNQLQAVGVKSGPCNELMQWDPLLLKASGHS 285
           +T  SSS+QLQ V VKSG C  L+++ P+ L+ +G+S
Sbjct: 308 ETPASSSSQLQVVAVKSGHCGALVEY-PVSLQMAGNS 343


>ref|XP_002326586.1| predicted protein [Populus trichocarpa] gi|222833908|gb|EEE72385.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  115 bits (287), Expect = 5e-24
 Identities = 64/107 (59%), Positives = 75/107 (70%), Gaps = 7/107 (6%)
 Frame = +1

Query: 4   WFVAVHAAVPFIAMLRKSVLMPKTAMAITIAASIVGQIIGSRAERIRLKSVYAEKKLK-- 177
           WF AVHAAVPFIAMLRKSVLMPKTAMA+TI ASI+GQIIGSRAER RLK+V ++++LK  
Sbjct: 254 WFAAVHAAVPFIAMLRKSVLMPKTAMALTIGASILGQIIGSRAERHRLKTVASKERLKVK 313

Query: 178 ----TSVSSSNQLQAVGVKSGPCNELMQWDPLLLKASG-HSGDDVCY 303
                +V   +  Q  G     C   M WDPLL+KASG  S   VC+
Sbjct: 314 TAIAAAVDRYSPSQVSGNAGSNCGTEMSWDPLLIKASGSKSSTSVCF 360


>ref|XP_002264517.1| PREDICTED: uncharacterized protein LOC100261262 isoform 1 [Vitis
           vinifera]
          Length = 353

 Score =  110 bits (276), Expect = 9e-23
 Identities = 61/105 (58%), Positives = 76/105 (72%), Gaps = 4/105 (3%)
 Frame = +1

Query: 1   SWFVAVHAAVPFIAMLRKSVLMPKTAMAITIAASIVGQIIGSRAERIRLKSVYAEKKLKT 180
           SWF AVHAAVPFIAMLRKSVLMPKTAMA+TI ASI+GQ+IGSRAER RLKSV   ++L  
Sbjct: 251 SWFAAVHAAVPFIAMLRKSVLMPKTAMALTIGASILGQVIGSRAERHRLKSVVERERLGA 310

Query: 181 SVSSSNQLQAVGVKSGPCN-ELMQWDPLLLKAS---GHSGDDVCY 303
           + +++    A+G+  G C  E   WDPL +K +   G S  +VC+
Sbjct: 311 TAAAAT--GAIGMGGGHCGAEGTMWDPLAIKGASGPGSSSANVCF 353


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