BLASTX nr result

ID: Coptis21_contig00006254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006254
         (1505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531297.1| dtdp-glucose 4-6-dehydratase, putative [Rici...   726   0.0  
ref|XP_002328342.1| predicted protein [Populus trichocarpa] gi|2...   719   0.0  
ref|XP_002319639.1| predicted protein [Populus trichocarpa] gi|2...   718   0.0  
gb|ADV59924.1| putative GDP-mannose-3,5-epimerase [Citrus unshiu]     716   0.0  
ref|XP_002279377.1| PREDICTED: GDP-mannose 3,5-epimerase 1 [Viti...   716   0.0  

>ref|XP_002531297.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis]
            gi|223529130|gb|EEF31110.1| dtdp-glucose 4-6-dehydratase,
            putative [Ricinus communis]
          Length = 376

 Score =  726 bits (1873), Expect = 0.0
 Identities = 348/360 (96%), Positives = 357/360 (99%)
 Frame = -2

Query: 1330 LEREPYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHL 1151
            LEREPYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHL
Sbjct: 17   LEREPYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHL 76

Query: 1150 VDLRVMDNCMKVTSGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNILEASRINGVK 971
            VDLRVMDNC+KVT GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFN+LEASRINGVK
Sbjct: 77   VDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRINGVK 136

Query: 970  RLFYASSACIYPEFKQLETNVSLKEADAWPAEPQDAYGLEKLATEELCKHYTKDFGIECR 791
            RLFYASSACIYPEFKQL+TNVSLKE+DAWPAEPQDAYGLEKLATEELCKHYTKDFGIECR
Sbjct: 137  RLFYASSACIYPEFKQLDTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECR 196

Query: 790  IGRFHNIYGPFGTWKGGREKAPAAFCRKALTATDKFEMWGDGLQTRSFTFIDECVEGVLR 611
            IGRFHNIYGPFGTWKGGREKAPAAFCRKALT+TDKFEMWGDGLQTRSFTFIDECVEGVLR
Sbjct: 197  IGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 256

Query: 610  LTKSDFCEPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKL 431
            LTKSDF EPVNIGSDEMVSMNEMAEIVLSFED+KLPIHHIPGPEGVRGRNSDNTLIKEKL
Sbjct: 257  LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDRKLPIHHIPGPEGVRGRNSDNTLIKEKL 316

Query: 430  GWAPTMRLKDGLRFTYFWIKEQIEKEKSRGIDLSVYGSSKVVGTQAPVQLGSLRAADGKE 251
            GWAPTMRLKDGLR TYFWIKEQIEKEKS+G+DLS+YGSSKVVGTQAPVQLGSLRAADGKE
Sbjct: 317  GWAPTMRLKDGLRITYFWIKEQIEKEKSQGVDLSIYGSSKVVGTQAPVQLGSLRAADGKE 376


>ref|XP_002328342.1| predicted protein [Populus trichocarpa] gi|222838057|gb|EEE76422.1|
            predicted protein [Populus trichocarpa]
          Length = 375

 Score =  719 bits (1857), Expect = 0.0
 Identities = 346/361 (95%), Positives = 355/361 (98%)
 Frame = -2

Query: 1333 ALEREPYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFH 1154
            ALEREPYWPSEKLRISITGAGGFIASHIARRLK+EGHYIIASDWKKNEHMTEDMFCHEFH
Sbjct: 15   ALEREPYWPSEKLRISITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMTEDMFCHEFH 74

Query: 1153 LVDLRVMDNCMKVTSGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNILEASRINGV 974
            LVDLRVMDNC+KVT  VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFN+LEASRINGV
Sbjct: 75   LVDLRVMDNCLKVTKDVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRINGV 134

Query: 973  KRLFYASSACIYPEFKQLETNVSLKEADAWPAEPQDAYGLEKLATEELCKHYTKDFGIEC 794
            KRLFYASSACIYPEFKQLETNVSLKE+DAWPAEPQDAYGLEKLATEELCKHYTKDFGIEC
Sbjct: 135  KRLFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIEC 194

Query: 793  RIGRFHNIYGPFGTWKGGREKAPAAFCRKALTATDKFEMWGDGLQTRSFTFIDECVEGVL 614
            RIGRFHNIYGPFGTWKGGREKAPAAFCRKA+T+ DKFEMWGDGLQTRSFTFIDECVEGVL
Sbjct: 195  RIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSIDKFEMWGDGLQTRSFTFIDECVEGVL 254

Query: 613  RLTKSDFCEPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEK 434
            RLTKSDF EPVNIGSDEMVSMNEMAEIVLSFE+K LPIHHIPGPEGVRGRNSDNTLIKEK
Sbjct: 255  RLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKNLPIHHIPGPEGVRGRNSDNTLIKEK 314

Query: 433  LGWAPTMRLKDGLRFTYFWIKEQIEKEKSRGIDLSVYGSSKVVGTQAPVQLGSLRAADGK 254
            LGWAPTMRLKDGLR TYFWIKEQIEKEKS+GIDLS+YGSSKVVGTQAPVQLGSLRAADGK
Sbjct: 315  LGWAPTMRLKDGLRITYFWIKEQIEKEKSKGIDLSIYGSSKVVGTQAPVQLGSLRAADGK 374

Query: 253  E 251
            E
Sbjct: 375  E 375


>ref|XP_002319639.1| predicted protein [Populus trichocarpa] gi|222858015|gb|EEE95562.1|
            predicted protein [Populus trichocarpa]
          Length = 375

 Score =  718 bits (1854), Expect = 0.0
 Identities = 344/361 (95%), Positives = 355/361 (98%)
 Frame = -2

Query: 1333 ALEREPYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFH 1154
            ALEREPYWPSE L+ISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFH
Sbjct: 15   ALEREPYWPSENLKISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFH 74

Query: 1153 LVDLRVMDNCMKVTSGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNILEASRINGV 974
            LVDLRVMDNC+KVT GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFN+LEASRINGV
Sbjct: 75   LVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRINGV 134

Query: 973  KRLFYASSACIYPEFKQLETNVSLKEADAWPAEPQDAYGLEKLATEELCKHYTKDFGIEC 794
            KRLFYASSACIYPEFKQLETNVSLKE+DAWPAEPQDAYGLEKLATEELCKHYTKDFGIEC
Sbjct: 135  KRLFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIEC 194

Query: 793  RIGRFHNIYGPFGTWKGGREKAPAAFCRKALTATDKFEMWGDGLQTRSFTFIDECVEGVL 614
            RIGRFHNIYGPFGTWKGGREKAPAAFCRK +T+ DKFEMWGDGLQTRSFTFIDECVEGVL
Sbjct: 195  RIGRFHNIYGPFGTWKGGREKAPAAFCRKTMTSIDKFEMWGDGLQTRSFTFIDECVEGVL 254

Query: 613  RLTKSDFCEPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEK 434
            RLTKSDF EPVNIGSDEMVSMNEMAEIVLSFE+K LPIHHIPGPEGVRGRNSDNTLIKEK
Sbjct: 255  RLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKNLPIHHIPGPEGVRGRNSDNTLIKEK 314

Query: 433  LGWAPTMRLKDGLRFTYFWIKEQIEKEKSRGIDLSVYGSSKVVGTQAPVQLGSLRAADGK 254
            LGWAPTM+LKDGLRFTYFWIKEQIEKEKS+G+DLS+YGSSKVVGTQAPVQLGSLRAADGK
Sbjct: 315  LGWAPTMKLKDGLRFTYFWIKEQIEKEKSQGMDLSIYGSSKVVGTQAPVQLGSLRAADGK 374

Query: 253  E 251
            E
Sbjct: 375  E 375


>gb|ADV59924.1| putative GDP-mannose-3,5-epimerase [Citrus unshiu]
          Length = 375

 Score =  716 bits (1849), Expect = 0.0
 Identities = 343/360 (95%), Positives = 355/360 (98%)
 Frame = -2

Query: 1330 LEREPYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHL 1151
            LEREPYWPSEKLRIS+TGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHL
Sbjct: 16   LEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHL 75

Query: 1150 VDLRVMDNCMKVTSGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNILEASRINGVK 971
            VDLRVMDNC+KVT GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFN+LEASRI+GVK
Sbjct: 76   VDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135

Query: 970  RLFYASSACIYPEFKQLETNVSLKEADAWPAEPQDAYGLEKLATEELCKHYTKDFGIECR 791
            R FYASSACIYPEFKQLETNVSLKE+DAWPAEPQDAYGLEKLA+EELCKHYTKDFGIECR
Sbjct: 136  RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195

Query: 790  IGRFHNIYGPFGTWKGGREKAPAAFCRKALTATDKFEMWGDGLQTRSFTFIDECVEGVLR 611
            +GRFHNIYGPFGTWKGGREKAPAAFCRKALT+TDKFEMWGDGLQTRSFTFIDECVEGVLR
Sbjct: 196  VGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 255

Query: 610  LTKSDFCEPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKL 431
            LTKSDF EPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKL
Sbjct: 256  LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKL 315

Query: 430  GWAPTMRLKDGLRFTYFWIKEQIEKEKSRGIDLSVYGSSKVVGTQAPVQLGSLRAADGKE 251
            GWAP+M+LKDGLR TYFWIKEQIEKEK+ GIDLSVYGSSKVVGTQAPVQLGSLRAADG+E
Sbjct: 316  GWAPSMKLKDGLRITYFWIKEQIEKEKTPGIDLSVYGSSKVVGTQAPVQLGSLRAADGQE 375


>ref|XP_002279377.1| PREDICTED: GDP-mannose 3,5-epimerase 1 [Vitis vinifera]
          Length = 376

 Score =  716 bits (1848), Expect = 0.0
 Identities = 344/360 (95%), Positives = 354/360 (98%)
 Frame = -2

Query: 1330 LEREPYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHL 1151
            LEREPYW SEKLRISITGAGGFIASHIARRLK+EGHYIIASDWKKNEHMTEDMFCHEFHL
Sbjct: 17   LEREPYWQSEKLRISITGAGGFIASHIARRLKTEGHYIIASDWKKNEHMTEDMFCHEFHL 76

Query: 1150 VDLRVMDNCMKVTSGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNILEASRINGVK 971
            VDLRVMDNC+KVT+GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFN+LEASRINGVK
Sbjct: 77   VDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRINGVK 136

Query: 970  RLFYASSACIYPEFKQLETNVSLKEADAWPAEPQDAYGLEKLATEELCKHYTKDFGIECR 791
            R FYASSACIYPEFKQLETNVSLKE+DAWPAEPQDAYGLEKLATEELCKHYTKDFGIECR
Sbjct: 137  RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECR 196

Query: 790  IGRFHNIYGPFGTWKGGREKAPAAFCRKALTATDKFEMWGDGLQTRSFTFIDECVEGVLR 611
            IGRFHNIYGPFGTWKGGREKAPAAFCRKALT+TDKFEMWGDGLQTRSFTFIDECVEGVLR
Sbjct: 197  IGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 256

Query: 610  LTKSDFCEPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKL 431
            LTKSDF EPVNIGSDEMVSMNEMAEIVLSFE+K LPIHHIPGPEGVRGRNSDNTLIKEKL
Sbjct: 257  LTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKNLPIHHIPGPEGVRGRNSDNTLIKEKL 316

Query: 430  GWAPTMRLKDGLRFTYFWIKEQIEKEKSRGIDLSVYGSSKVVGTQAPVQLGSLRAADGKE 251
            GWAPTM+LKDGLR TYFWIKEQIEKEK +GIDLS+YGSSKVVGTQAPVQLGSLRAADGKE
Sbjct: 317  GWAPTMKLKDGLRITYFWIKEQIEKEKVKGIDLSIYGSSKVVGTQAPVQLGSLRAADGKE 376


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