BLASTX nr result

ID: Coptis21_contig00006249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006249
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273029.1| PREDICTED: tryptophanyl-tRNA synthetase [Vit...    78   1e-12
emb|CAN69374.1| hypothetical protein VITISV_008200 [Vitis vinifera]    78   1e-12
ref|XP_002516528.1| tryptophanyl-tRNA synthetase, putative [Rici...    74   2e-11
gb|ACN36389.1| unknown [Zea mays] gi|414880564|tpg|DAA57695.1| T...    71   1e-10
ref|NP_001140250.1| uncharacterized protein LOC100272291 [Zea ma...    71   1e-10

>ref|XP_002273029.1| PREDICTED: tryptophanyl-tRNA synthetase [Vitis vinifera]
           gi|296081565|emb|CBI20570.3| unnamed protein product
           [Vitis vinifera]
          Length = 416

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 38/44 (86%), Positives = 42/44 (95%)
 Frame = +3

Query: 3   VRYEEIISDSAYLDRVLVEGATKASNIADATLNNVYQAMGFLPR 134
           VRYEEI+SDSAYLDR+L EGATKA++IADATLNNVYQAMGFL R
Sbjct: 373 VRYEEIMSDSAYLDRLLAEGATKAADIADATLNNVYQAMGFLRR 416


>emb|CAN69374.1| hypothetical protein VITISV_008200 [Vitis vinifera]
          Length = 137

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 38/44 (86%), Positives = 42/44 (95%)
 Frame = +3

Query: 3   VRYEEIISDSAYLDRVLVEGATKASNIADATLNNVYQAMGFLPR 134
           VRYEEI+SDSAYLDR+L EGATKA++IADATLNNVYQAMGFL R
Sbjct: 94  VRYEEIMSDSAYLDRLLAEGATKAADIADATLNNVYQAMGFLRR 137


>ref|XP_002516528.1| tryptophanyl-tRNA synthetase, putative [Ricinus communis]
           gi|223544348|gb|EEF45869.1| tryptophanyl-tRNA
           synthetase, putative [Ricinus communis]
          Length = 412

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/44 (84%), Positives = 39/44 (88%)
 Frame = +3

Query: 3   VRYEEIISDSAYLDRVLVEGATKASNIADATLNNVYQAMGFLPR 134
           V+YEEIISDSAYLDRVL EGA  A+ IADATLNNVYQAMGFL R
Sbjct: 369 VQYEEIISDSAYLDRVLEEGAANAAEIADATLNNVYQAMGFLRR 412


>gb|ACN36389.1| unknown [Zea mays] gi|414880564|tpg|DAA57695.1| TPA: hypothetical
           protein ZEAMMB73_474699 [Zea mays]
          Length = 212

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/44 (79%), Positives = 38/44 (86%)
 Frame = +3

Query: 3   VRYEEIISDSAYLDRVLVEGATKASNIADATLNNVYQAMGFLPR 134
           VRYEEI+SD AYLD VL+EGA KA+ IAD TLNNVYQAMGFL R
Sbjct: 169 VRYEEIMSDPAYLDNVLLEGAVKAAEIADITLNNVYQAMGFLRR 212


>ref|NP_001140250.1| uncharacterized protein LOC100272291 [Zea mays]
           gi|194698694|gb|ACF83431.1| unknown [Zea mays]
           gi|414880562|tpg|DAA57693.1| TPA: hypothetical protein
           ZEAMMB73_474699 [Zea mays]
          Length = 405

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/44 (79%), Positives = 38/44 (86%)
 Frame = +3

Query: 3   VRYEEIISDSAYLDRVLVEGATKASNIADATLNNVYQAMGFLPR 134
           VRYEEI+SD AYLD VL+EGA KA+ IAD TLNNVYQAMGFL R
Sbjct: 362 VRYEEIMSDPAYLDNVLLEGAVKAAEIADITLNNVYQAMGFLRR 405


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