BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006241
         (1414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleop...   236   1e-81
ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-bindin...   233   2e-79
ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, ...   227   4e-78
ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homol...   220   3e-77
ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Gl...   218   2e-76

>ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
           vinifera] gi|147768836|emb|CAN78130.1| hypothetical
           protein VITISV_036088 [Vitis vinifera]
          Length = 348

 Score =  236 bits (601), Expect(2) = 1e-81
 Identities = 123/200 (61%), Positives = 136/200 (68%), Gaps = 1/200 (0%)
 Frame = +3

Query: 216 HVINGKQVEIKRTIPKGSSQSKDFKTKKIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIR 395
           HVINGKQVEIKRTIPKGS QSKDFKTKKIFVGGVP+TVTEDEFKNFFSKYG VVEHQIIR
Sbjct: 81  HVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVTEDEFKNFFSKYGKVVEHQIIR 140

Query: 396 DHTTNRSRGFGFIVYDNEQVVDDILVNGNMIDMDGTQVEIKKAEPKKTSNPPSALAFASD 575
           DH TNRSRGFGFI++D+E+VVD+++  GNMIDM GTQVEIKKAEPKK SNPP A A+ S+
Sbjct: 141 DHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEIKKAEPKKASNPPPAPAYGSN 200

Query: 576 SRVRPLXXXXXXXXXXXXXXXXXXXXXXXRTP-XXXXXXXXXXXXXXXXXXXXXAYGGFG 752
           SR R                         RTP                       YGGFG
Sbjct: 201 SRARSFSDGFGGFGSSYGGFDSGFGPGPYRTPGGVGGRLGGYGGYGSSGSEFGGGYGGFG 260

Query: 753 GTGIDNYQGESPLGYSSRFG 812
            + +  Y+GES LGYSSRFG
Sbjct: 261 SSSLGGYRGESSLGYSSRFG 280



 Score = 95.9 bits (237), Expect(2) = 1e-81
 Identities = 45/53 (84%), Positives = 47/53 (88%)
 Frame = +1

Query: 1   TFTNYFEKYGGITDSVIMKDRYTGHPRGFGFITYADPSVVDIVIEETHVINGK 159
           TF  +F KYG ITDSVIMKDRYTG PRGFGFITYADPSVVD VIE+THVINGK
Sbjct: 34  TFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIEDTHVINGK 86



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 33/79 (41%), Positives = 49/79 (62%)
 Frame = +3

Query: 297 KIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVN 476
           KIF+GG+    T   F   F KYG++ +  I++D  T + RGFGFI Y +  VVD ++ +
Sbjct: 20  KIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIED 79

Query: 477 GNMIDMDGTQVEIKKAEPK 533
            ++I  +G QVEIK+  PK
Sbjct: 80  THVI--NGKQVEIKRTIPK 96


>ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
           [Cucumis sativus] gi|449496860|ref|XP_004160246.1|
           PREDICTED: nuclear polyadenylated RNA-binding protein
           4-like [Cucumis sativus]
          Length = 347

 Score =  233 bits (593), Expect(2) = 2e-79
 Identities = 119/199 (59%), Positives = 133/199 (66%)
 Frame = +3

Query: 216 HVINGKQVEIKRTIPKGSSQSKDFKTKKIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIR 395
           HVINGKQVEIKRTIPKG  QSKDFKTKKIFVGG+P+TVTEDEFK+FFSKYG +VEHQIIR
Sbjct: 81  HVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTEDEFKHFFSKYGKIVEHQIIR 140

Query: 396 DHTTNRSRGFGFIVYDNEQVVDDILVNGNMIDMDGTQVEIKKAEPKKTSNPPSALAFASD 575
           DH TNRSRGFGFIV++ E+VVD+IL  GNMIDM GTQVEIKKAEPKK+SNP  A A+ S+
Sbjct: 141 DHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEIKKAEPKKSSNPLPAPAYGSN 200

Query: 576 SRVRPLXXXXXXXXXXXXXXXXXXXXXXXRTPXXXXXXXXXXXXXXXXXXXXXAYGGFGG 755
           SR R                         R P                      YGGFGG
Sbjct: 201 SRARTFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIGSGYGYGSGGDFGGGYGGFGG 260

Query: 756 TGIDNYQGESPLGYSSRFG 812
             +  Y+G+S LGYSSRFG
Sbjct: 261 NSLGGYRGDSSLGYSSRFG 279



 Score = 91.7 bits (226), Expect(2) = 2e-79
 Identities = 43/52 (82%), Positives = 45/52 (86%)
 Frame = +1

Query: 4   FTNYFEKYGGITDSVIMKDRYTGHPRGFGFITYADPSVVDIVIEETHVINGK 159
           F  +F  YG ITDSVIMKDRYTG PRGFGFITYADPSVVD VIE+THVINGK
Sbjct: 35  FNKHFGNYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHVINGK 86



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 32/79 (40%), Positives = 48/79 (60%)
 Frame = +3

Query: 297 KIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVN 476
           KIF+GG+    T  +F   F  YG + +  I++D  T + RGFGFI Y +  VVD ++ +
Sbjct: 20  KIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79

Query: 477 GNMIDMDGTQVEIKKAEPK 533
            ++I  +G QVEIK+  PK
Sbjct: 80  THVI--NGKQVEIKRTIPK 96


>ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
           communis] gi|223538031|gb|EEF39644.1| Heterogeneous
           nuclear ribonucleoprotein A1, putative [Ricinus
           communis]
          Length = 348

 Score =  227 bits (579), Expect(2) = 4e-78
 Identities = 118/200 (59%), Positives = 135/200 (67%), Gaps = 1/200 (0%)
 Frame = +3

Query: 216 HVINGKQVEIKRTIPKGSSQSKDFKTKKIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIR 395
           HVI+GKQVEIKRTIPKGS QSKDFKTKKIFVGG+P++VTEDEFK FFSKYG VVEHQIIR
Sbjct: 81  HVIHGKQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVTEDEFKGFFSKYGQVVEHQIIR 140

Query: 396 DHTTNRSRGFGFIVYDNEQVVDDILVNGNMIDMDGTQVEIKKAEPKKTSNPPSALAFASD 575
           DH TNRSRGFGFI++D+E+ VD++L NGNMIDM GTQVEIKKAEPKK SNPP A ++ S+
Sbjct: 141 DHETNRSRGFGFIIFDSEETVDEMLSNGNMIDMAGTQVEIKKAEPKKASNPPPAPSYGSN 200

Query: 576 SRVRPLXXXXXXXXXXXXXXXXXXXXXXXRTP-XXXXXXXXXXXXXXXXXXXXXAYGGFG 752
           SR R                         RTP                      +YG FG
Sbjct: 201 SRGRSYNDSYGGFGGSYGGFDGGFGPGPYRTPGSLGGRLSSAYGYGSGGGDFGGSYGSFG 260

Query: 753 GTGIDNYQGESPLGYSSRFG 812
           G+ +  Y+GES LGYS RFG
Sbjct: 261 GSSLGGYRGESSLGYSGRFG 280



 Score = 92.4 bits (228), Expect(2) = 4e-78
 Identities = 43/53 (81%), Positives = 47/53 (88%)
 Frame = +1

Query: 1   TFTNYFEKYGGITDSVIMKDRYTGHPRGFGFITYADPSVVDIVIEETHVINGK 159
           TF  +F +YG ITDSVIMKDRYTG PRGFGFITYADPSVVD VIE+THVI+GK
Sbjct: 34  TFNKHFGRYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHVIHGK 86



 Score = 64.7 bits (156), Expect = 6e-08
 Identities = 32/79 (40%), Positives = 47/79 (59%)
 Frame = +3

Query: 297 KIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVN 476
           KIF+GG+    T   F   F +YG + +  I++D  T + RGFGFI Y +  VVD ++ +
Sbjct: 20  KIFIGGLAKDTTYATFNKHFGRYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79

Query: 477 GNMIDMDGTQVEIKKAEPK 533
            ++I   G QVEIK+  PK
Sbjct: 80  THVI--HGKQVEIKRTIPK 96


>ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Vitis vinifera]
          Length = 348

 Score =  220 bits (561), Expect(2) = 3e-77
 Identities = 116/200 (58%), Positives = 130/200 (65%), Gaps = 1/200 (0%)
 Frame = +3

Query: 216 HVINGKQVEIKRTIPKGSSQSKDFKTKKIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIR 395
           HVINGKQVEIKRTIPKGS QSKDFKTKKIFVGG+P+TVTEDEFK+FFSKYG V EHQIIR
Sbjct: 81  HVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGLPSTVTEDEFKDFFSKYGKVEEHQIIR 140

Query: 396 DHTTNRSRGFGFIVYDNEQVVDDILVNGNMIDMDGTQVEIKKAEPKKTSNPPSALAFASD 575
           DH TNRSRGFGFI++++E+VVD+IL  GNMIDM GTQVEIKKAEPKK SNPP   AF S+
Sbjct: 141 DHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQVEIKKAEPKKASNPPHVSAFGSN 200

Query: 576 SRVRPLXXXXXXXXXXXXXXXXXXXXXXXRTP-XXXXXXXXXXXXXXXXXXXXXAYGGFG 752
           SR R                         R                         YG FG
Sbjct: 201 SRARSFSDGFGGFGSSYGSYDSGFGAAPYRAAGGLGSRLGGYGGYGSDGGEYGGGYGSFG 260

Query: 753 GTGIDNYQGESPLGYSSRFG 812
            + +  Y+G+  LGYSSRFG
Sbjct: 261 SSNLGGYRGDPSLGYSSRFG 280



 Score = 96.3 bits (238), Expect(2) = 3e-77
 Identities = 44/52 (84%), Positives = 47/52 (90%)
 Frame = +1

Query: 4   FTNYFEKYGGITDSVIMKDRYTGHPRGFGFITYADPSVVDIVIEETHVINGK 159
           F  +FEKYG ITDSVIMKDRYTG PRGFGF+TYADPSVVD VIE+THVINGK
Sbjct: 35  FNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIEDTHVINGK 86



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 32/79 (40%), Positives = 48/79 (60%)
 Frame = +3

Query: 297 KIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVN 476
           KIF+GG+    T   F   F KYG + +  I++D  T + RGFGF+ Y +  VVD ++ +
Sbjct: 20  KIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIED 79

Query: 477 GNMIDMDGTQVEIKKAEPK 533
            ++I  +G QVEIK+  PK
Sbjct: 80  THVI--NGKQVEIKRTIPK 96


>ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
          Length = 352

 Score =  218 bits (556), Expect(2) = 2e-76
 Identities = 117/203 (57%), Positives = 135/203 (66%), Gaps = 4/203 (1%)
 Frame = +3

Query: 216 HVINGKQVEIKRTIPKGSSQSKDFKTKKIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIR 395
           HV+NGKQVEIKRTIPKGSSQ+ DFKTKKIFVGG+PT+V+EDE KNFFSKYG VVEH+IIR
Sbjct: 80  HVVNGKQVEIKRTIPKGSSQANDFKTKKIFVGGIPTSVSEDELKNFFSKYGKVVEHEIIR 139

Query: 396 DHTTNRSRGFGFIVYDNEQVVDDILVNGNMIDMDGTQVEIKKAEPKKTSNPPSALAFASD 575
           DHTT RSRGFGFIV+D+E+VVD+IL +GNMIDM GTQVEIKKAEPKK+SNP S   FASD
Sbjct: 140 DHTTKRSRGFGFIVFDSEKVVDNILADGNMIDMGGTQVEIKKAEPKKSSNPASLPPFASD 199

Query: 576 SRVRPL-XXXXXXXXXXXXXXXXXXXXXXXRTPXXXXXXXXXXXXXXXXXXXXXAYGGFG 752
           SR R                          R+                      ++GG+G
Sbjct: 200 SRARSYNDGFGGFGDSYGSFGGSGYGPGSYRSLGGFGGRLGDYGGYGAGDEFGGSFGGYG 259

Query: 753 GTGIDNY---QGESPLGYSSRFG 812
           G G   Y   +GES  GYSSR+G
Sbjct: 260 GAGAGGYAGFRGESSFGYSSRYG 282



 Score = 95.9 bits (237), Expect(2) = 2e-76
 Identities = 44/53 (83%), Positives = 47/53 (88%)
 Frame = +1

Query: 1   TFTNYFEKYGGITDSVIMKDRYTGHPRGFGFITYADPSVVDIVIEETHVINGK 159
           TF  YFEKYG ITDSVIMKDR+TG PRGFGFITYADPSVVD VI+E HV+NGK
Sbjct: 33  TFVKYFEKYGEITDSVIMKDRHTGRPRGFGFITYADPSVVDQVIQENHVVNGK 85



 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 34/82 (41%), Positives = 51/82 (62%)
 Frame = +3

Query: 297 KIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVN 476
           KIF+GG+    T + F  +F KYG + +  I++D  T R RGFGFI Y +  VVD ++  
Sbjct: 19  KIFIGGLAKDTTLETFVKYFEKYGEITDSVIMKDRHTGRPRGFGFITYADPSVVDQVIQE 78

Query: 477 GNMIDMDGTQVEIKKAEPKKTS 542
            +++  +G QVEIK+  PK +S
Sbjct: 79  NHVV--NGKQVEIKRTIPKGSS 98