BLASTX nr result
ID: Coptis21_contig00006240
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00006240
(2133 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAQ74973.1| flowering time control protein isoform OsFCA-4 [O... 362 3e-97
gb|EEC84106.1| hypothetical protein OsI_30426 [Oryza sativa Indi... 359 1e-96
ref|NP_001062601.1| Os09g0123200 [Oryza sativa Japonica Group] g... 359 2e-96
gb|AAQ17123.1| flowering time control protein isoform OsFCA-1 [O... 359 2e-96
emb|CAB05388.1| FCA gamma [Arabidopsis thaliana] gi|57169178|gb|... 348 4e-93
>gb|AAQ74973.1| flowering time control protein isoform OsFCA-4 [Oryza sativa Indica
Group]
Length = 626
Score = 362 bits (928), Expect = 3e-97
Identities = 224/573 (39%), Positives = 307/573 (53%), Gaps = 88/573 (15%)
Frame = +1
Query: 169 DNGGYVKLYVGSIPRTASADDVGPFFEEYGKVLEVFIMKDKRSGQQQGCCFVKYETLEEA 348
+ YVKL++GS+PRTA+ DDV P FEE+G V+EV ++KD+++G+QQGCCFVKY T EEA
Sbjct: 16 NRNNYVKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEA 75
Query: 349 ERAIKALHNQYTFPGELGPIQVRYADGEQERLGASAIGKKLFIVNLNKQAIEKDVEKIFS 528
ERAI+ALHNQYT PG +GPIQVRYADGE+ER G AI KLF+ +LNKQA K++E+IF+
Sbjct: 76 ERAIRALHNQYTLPGAMGPIQVRYADGERERHG--AIEHKLFVASLNKQATAKEIEEIFA 133
Query: 529 PYGLVEDIFLLRDEMKQSRGSGFVEFLHRDMAVAAMNALNGTYVMEGCDQPLLVRFAHPK 708
PYG VED+++++D M+QSRG GFV+F R+ A+AAM+AL+G YVM GC+QPL++RFA PK
Sbjct: 134 PYGHVEDVYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPK 193
Query: 709 RSKFGEHRNDNAVFSSGFGPKFHAPRSIRPAPNHGDAIDRDVQPN--------------- 843
R + GE R A GF P+ A IRP N + R + P+
Sbjct: 194 RPRPGESRGGPAFGGPGFSPRSDAALVIRPTANLDEPRGRHMPPDSWHPSSPRSAPHQFN 253
Query: 844 --------------VCSSSQAHDFASQ------SVAESGVVPNPATMCSKPSMPEVSPGH 963
V S++ F Q S++ VP+ + M P P ++ GH
Sbjct: 254 NFGSDNPMAPKGSTVTSTTDTATFRPQMFSGNGSLSSQTAVPSSSHMGMNP--PPMAQGH 311
Query: 964 HL-----VPLEKXXXXXXXXXXXXXXXTQDTPASSKIQVSPFPVQQLGQLQIQTD----- 1113
HL PL+K Q P P QQ+GQLQ+
Sbjct: 312 HLGGQQIPPLQKLPGLPQNFPVQLQNNQQGQPLQG-------PAQQIGQLQVPQSMGPGS 364
Query: 1114 --------------------------DVPSTVSQRKQCVPAIQ--------QQSAKPLQQ 1191
VPS VS Q +P Q Q +P+QQ
Sbjct: 365 FGQNRLSGQLPVSQPLMQQNASVSAVQVPSAVSNSMQAIPGQQHLPSNVAPQMLQQPVQQ 424
Query: 1192 LADQSAQIPAQQEQVLQGIFQSSQQAPSQGHEQLHLMQHSSQTPVEERKSGDGEQQLQEA 1371
+ Q+ Q+ QQ+ LQ +QSSQQA Q +QL LMQ Q+ + ++ G Q +Q +
Sbjct: 425 MPSQAPQLLLQQQAALQSSYQSSQQAIYQLQQQLQLMQQQQQSNLNHQQPTQG-QPVQSS 483
Query: 1372 ARTAGTTSATLPTSETFSVRSQTAPP---TCEWSEHNCPDGCKYYYNCITKESRWEKPNF 1542
G +A +P++ + T+P TC W+EH P+G KYYYN IT+ES+W+KP
Sbjct: 484 --NPGAPNAIIPSNINTIPQQATSPAVPLTCNWTEHTSPEGFKYYYNSITRESKWDKPEE 541
Query: 1543 SV---TQSKEVQLQKTI---SDQQRLQIHQTSS 1623
V Q ++ Q QK + QQ+L + Q S
Sbjct: 542 YVLYEQQQQQQQQQKLLLLQQHQQKLAMQQLQS 574
>gb|EEC84106.1| hypothetical protein OsI_30426 [Oryza sativa Indica Group]
Length = 758
Score = 359 bits (922), Expect = 1e-96
Identities = 221/575 (38%), Positives = 307/575 (53%), Gaps = 90/575 (15%)
Frame = +1
Query: 169 DNGGYVKLYVGSIPRTASADDVGPFFEEYGKVLEVFIMKDKRSGQQQGCCFVKYETLEEA 348
+ YVKL++GS+PRTA+ DDV P FEE+G V+EV ++KD+++G+QQGCCFVKY T EEA
Sbjct: 117 NRNNYVKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEA 176
Query: 349 ERAIKALHNQYTFPGELGPIQVRYADGEQERLGASAIGKKLFIVNLNKQAIEKDVEKIFS 528
ERAI+ALHNQYT PG +GPIQVRYADGE+ER G AI KLF+ +LNKQA K++E+IF+
Sbjct: 177 ERAIRALHNQYTLPGAMGPIQVRYADGERERHG--AIEHKLFVASLNKQATAKEIEEIFA 234
Query: 529 PYGLVEDIFLLRDEMKQSRGSGFVEFLHRDMAVAAMNALNGTYVMEGCDQPLLVRFAHPK 708
PYG VED+++++D M+QSRG GFV+F R+ A+AAM+AL+G YVM GC+QPL++RFA PK
Sbjct: 235 PYGHVEDVYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPK 294
Query: 709 RSKFGEHRNDNAVFSSGFGPKFHAPRSIRPAPNHGDAIDRDVQPN--------------- 843
R + GE R A GF P+ A IRP N + R + P+
Sbjct: 295 RPRPGESRGGPAFGGPGFSPRSDAALVIRPTANLDEPRGRHMPPDSWHPSSPRSAPHQFN 354
Query: 844 --------------VCSSSQAHDFASQ------SVAESGVVPNPATMCSKPSMPEVSPGH 963
V S++ F Q S++ VP+ + M P P ++ GH
Sbjct: 355 NFGSDNPMAPKGSTVTSTTDTATFRPQMFSGNGSLSSQTAVPSSSHMGMNP--PPMAQGH 412
Query: 964 HL-----VPLEKXXXXXXXXXXXXXXXTQDTPASSKIQVSPFPVQQLGQLQIQTD----- 1113
HL PL+K Q P P QQ+GQLQ+
Sbjct: 413 HLGGQQIPPLQKLPGLPQNFPVQLQNNQQGQPLQG-------PAQQIGQLQVPQSMGPGS 465
Query: 1114 --------------------------DVPSTVSQRKQCVPAIQ--------QQSAKPLQQ 1191
PS VS Q +P Q Q +P+QQ
Sbjct: 466 FGQNMLSGQLPVSQPLMQQNASVGAVQAPSAVSNSMQAIPGQQHLPSNVAPQMLQQPVQQ 525
Query: 1192 LADQSAQIPAQQEQVLQGIFQSSQQAPSQGHEQLHLMQHSSQTPVEERKSGDGEQQLQEA 1371
+ Q+ Q+ QQ+ LQ +QSSQQA Q +QL LMQ Q+ + ++ +Q +
Sbjct: 526 MPSQAPQLLLQQQAALQSSYQSSQQAIYQLQQQLQLMQQQQQSNLNHQQPTQVAEQHGQP 585
Query: 1372 ARTA--GTTSATLPTSETFSVRSQTAPP---TCEWSEHNCPDGCKYYYNCITKESRWEKP 1536
+++ G +A +P++ + T+P TC W+EH P+G KYYYN IT+ES+W+KP
Sbjct: 586 VQSSNPGAPNAIIPSNINTIPQQATSPAVPLTCNWTEHTSPEGFKYYYNSITRESKWDKP 645
Query: 1537 NFSV---TQSKEVQLQKTI---SDQQRLQIHQTSS 1623
V Q ++ Q QK + QQ+L + Q S
Sbjct: 646 EEYVLYEQQQQQQQQQKLLLLQQHQQKLAMQQLQS 680
>ref|NP_001062601.1| Os09g0123200 [Oryza sativa Japonica Group] gi|34555646|gb|AAQ74971.1|
flowering time control protein isoform OsFCA-3 [Oryza
sativa Indica Group] gi|113630834|dbj|BAF24515.1|
Os09g0123200 [Oryza sativa Japonica Group]
Length = 637
Score = 359 bits (921), Expect = 2e-96
Identities = 223/573 (38%), Positives = 306/573 (53%), Gaps = 88/573 (15%)
Frame = +1
Query: 169 DNGGYVKLYVGSIPRTASADDVGPFFEEYGKVLEVFIMKDKRSGQQQGCCFVKYETLEEA 348
+ YVKL++GS+PRTA+ DDV P FEE+G V+EV ++KD+++G+QQGCCFVKY T EEA
Sbjct: 16 NRNNYVKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEA 75
Query: 349 ERAIKALHNQYTFPGELGPIQVRYADGEQERLGASAIGKKLFIVNLNKQAIEKDVEKIFS 528
ERAI+ALHNQYT PG +GPIQVRYADGE+ER G AI KLF+ +LNKQA K++E+IF+
Sbjct: 76 ERAIRALHNQYTLPGAMGPIQVRYADGERERHG--AIEHKLFVASLNKQATAKEIEEIFA 133
Query: 529 PYGLVEDIFLLRDEMKQSRGSGFVEFLHRDMAVAAMNALNGTYVMEGCDQPLLVRFAHPK 708
PYG VED+++++D M+QSRG GFV+F R+ A+AAM+AL+G YVM GC+QPL++RFA PK
Sbjct: 134 PYGHVEDVYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPK 193
Query: 709 RSKFGEHRNDNAVFSSGFGPKFHAPRSIRPAPNHGDAIDRDVQPN--------------- 843
R + GE R A GF P+ A IRP N + R + P+
Sbjct: 194 RPRPGESRGGPAFGGPGFSPRSDAALVIRPTANLDEPRGRHMPPDSWHPSSPRSAPHQFN 253
Query: 844 --------------VCSSSQAHDFASQ------SVAESGVVPNPATMCSKPSMPEVSPGH 963
V S++ F Q S++ VP+ + M P P ++ GH
Sbjct: 254 NFGSDNPMAPKGSTVTSTTDTATFRPQMFSGNGSLSSQTAVPSSSHMGMNP--PPMAQGH 311
Query: 964 HL-----VPLEKXXXXXXXXXXXXXXXTQDTPASSKIQVSPFPVQQLGQLQIQTD----- 1113
HL PL+K P P QQ+GQLQ+
Sbjct: 312 HLGGQQIPPLQKLPGLPQNFPVQLQNNQLGQPLQG-------PAQQIGQLQVPQSMGPGS 364
Query: 1114 --------------------------DVPSTVSQRKQCVPAIQ--------QQSAKPLQQ 1191
VPS VS Q +P Q Q +P+QQ
Sbjct: 365 FGQNRLSGQLPVSQPLMQQNASVSAVQVPSAVSNSMQAIPGQQHLPSNVAPQMLQQPVQQ 424
Query: 1192 LADQSAQIPAQQEQVLQGIFQSSQQAPSQGHEQLHLMQHSSQTPVEERKSGDGEQQLQEA 1371
+ Q+ Q+ QQ+ LQ +QSSQQA Q +QL LMQ Q+ + ++ G Q +Q +
Sbjct: 425 MPSQAPQLLLQQQAALQSSYQSSQQAIYQLQQQLQLMQQQQQSNLNHQQPTQG-QPVQSS 483
Query: 1372 ARTAGTTSATLPTSETFSVRSQTAPP---TCEWSEHNCPDGCKYYYNCITKESRWEKPNF 1542
G +A +P++ + T+P TC W+EH P+G KYYYN IT+ES+W+KP
Sbjct: 484 --NPGAPNAIIPSNINTIPQQATSPAVPLTCNWTEHTSPEGFKYYYNSITRESKWDKPEE 541
Query: 1543 SV---TQSKEVQLQKTI---SDQQRLQIHQTSS 1623
V Q ++ Q QK + QQ+L + Q S
Sbjct: 542 YVLYEQQQQQQQQQKLLLLQQHQQKLAMQQLQS 574
>gb|AAQ17123.1| flowering time control protein isoform OsFCA-1 [Oryza sativa Indica
Group] gi|47496990|dbj|BAD20100.1| Flowering time control
protein FCA gamma-like [Oryza sativa Japonica Group]
gi|50261763|gb|AAT72462.1| FCA gamma protein [Oryza
sativa Japonica Group] gi|58003966|gb|AAW62371.1| FCA
[Oryza sativa Japonica Group]
Length = 738
Score = 359 bits (921), Expect = 2e-96
Identities = 223/573 (38%), Positives = 306/573 (53%), Gaps = 88/573 (15%)
Frame = +1
Query: 169 DNGGYVKLYVGSIPRTASADDVGPFFEEYGKVLEVFIMKDKRSGQQQGCCFVKYETLEEA 348
+ YVKL++GS+PRTA+ DDV P FEE+G V+EV ++KD+++G+QQGCCFVKY T EEA
Sbjct: 117 NRNNYVKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEA 176
Query: 349 ERAIKALHNQYTFPGELGPIQVRYADGEQERLGASAIGKKLFIVNLNKQAIEKDVEKIFS 528
ERAI+ALHNQYT PG +GPIQVRYADGE+ER G AI KLF+ +LNKQA K++E+IF+
Sbjct: 177 ERAIRALHNQYTLPGAMGPIQVRYADGERERHG--AIEHKLFVASLNKQATAKEIEEIFA 234
Query: 529 PYGLVEDIFLLRDEMKQSRGSGFVEFLHRDMAVAAMNALNGTYVMEGCDQPLLVRFAHPK 708
PYG VED+++++D M+QSRG GFV+F R+ A+AAM+AL+G YVM GC+QPL++RFA PK
Sbjct: 235 PYGHVEDVYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPK 294
Query: 709 RSKFGEHRNDNAVFSSGFGPKFHAPRSIRPAPNHGDAIDRDVQPN--------------- 843
R + GE R A GF P+ A IRP N + R + P+
Sbjct: 295 RPRPGESRGGPAFGGPGFSPRSDAALVIRPTANLDEPRGRHMPPDSWHPSSPRSAPHQFN 354
Query: 844 --------------VCSSSQAHDFASQ------SVAESGVVPNPATMCSKPSMPEVSPGH 963
V S++ F Q S++ VP+ + M P P ++ GH
Sbjct: 355 NFGSDNPMAPKGSTVTSTTDTATFRPQMFSGNGSLSSQTAVPSSSHMGMNP--PPMAQGH 412
Query: 964 HL-----VPLEKXXXXXXXXXXXXXXXTQDTPASSKIQVSPFPVQQLGQLQIQTD----- 1113
HL PL+K P P QQ+GQLQ+
Sbjct: 413 HLGGQQIPPLQKLPGLPQNFPVQLQNNQLGQPLQG-------PAQQIGQLQVPQSMGPGS 465
Query: 1114 --------------------------DVPSTVSQRKQCVPAIQ--------QQSAKPLQQ 1191
VPS VS Q +P Q Q +P+QQ
Sbjct: 466 FGQNRLSGQLPVSQPLMQQNASVSAVQVPSAVSNSMQAIPGQQHLPSNVAPQMLQQPVQQ 525
Query: 1192 LADQSAQIPAQQEQVLQGIFQSSQQAPSQGHEQLHLMQHSSQTPVEERKSGDGEQQLQEA 1371
+ Q+ Q+ QQ+ LQ +QSSQQA Q +QL LMQ Q+ + ++ G Q +Q +
Sbjct: 526 MPSQAPQLLLQQQAALQSSYQSSQQAIYQLQQQLQLMQQQQQSNLNHQQPTQG-QPVQSS 584
Query: 1372 ARTAGTTSATLPTSETFSVRSQTAPP---TCEWSEHNCPDGCKYYYNCITKESRWEKPNF 1542
G +A +P++ + T+P TC W+EH P+G KYYYN IT+ES+W+KP
Sbjct: 585 --NPGAPNAIIPSNINTIPQQATSPAVPLTCNWTEHTSPEGFKYYYNSITRESKWDKPEE 642
Query: 1543 SV---TQSKEVQLQKTI---SDQQRLQIHQTSS 1623
V Q ++ Q QK + QQ+L + Q S
Sbjct: 643 YVLYEQQQQQQQQQKLLLLQQHQQKLAMQQLQS 675
>emb|CAB05388.1| FCA gamma [Arabidopsis thaliana] gi|57169178|gb|AAW38964.1| FCA
[Arabidopsis thaliana]
Length = 747
Score = 348 bits (892), Expect = 4e-93
Identities = 222/561 (39%), Positives = 302/561 (53%), Gaps = 66/561 (11%)
Frame = +1
Query: 133 PFFDRKRPFPFSDNGGY-----------VKLYVGSIPRTASADDVGPFFEEYGKVLEVFI 279
P +KR +P SD+G + VKL+VGS+PRTA+ +++ P+FE++G VLEV +
Sbjct: 92 PLSGQKRGYPISDHGSFTGTDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVAL 151
Query: 280 MKDKRSGQQQGCCFVKYETLEEAERAIKALHNQYTFPGELGPIQVRYADGEQERLGASAI 459
+KDKR+GQQQGCCFVKY T ++A+RAI+ALHNQ T PG GP+QVRYADGE+ER+G
Sbjct: 152 IKDKRTGQQQGCCFVKYATSKDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEF 211
Query: 460 GKKLFIVNLNKQAIEKDVEKIFSPYGLVEDIFLLRDEMKQSRGSGFVEFLHRDMAVAAMN 639
KLF+ +LNKQA EK+VE+IF +G VED++L+RDE +QSRG GFV++ ++ A+AA++
Sbjct: 212 --KLFVGSLNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAID 269
Query: 640 ALNGTYVMEGCDQPLLVRFAHPKRSKFGEHRNDNAVFSSGFGPKFHAPRSIRPAPNHGD- 816
LNGTY M GC+QPL+VRFA PKR K GE R+ G GP+F A RP N GD
Sbjct: 270 GLNGTYTMRGCNQPLIVRFAEPKRPKPGESRDMAPPVGLGSGPRFQASGP-RPTSNFGDS 328
Query: 817 ------------AIDRDVQP--NVCSSSQAHDFA---SQSVAES---------GVVP-NP 915
A R+V P N DF+ Q+ S GV P NP
Sbjct: 329 SGDVSHTNPWRPATSRNVGPPSNTGIRGAGSDFSPKPGQATLPSNQGGPLGGYGVPPLNP 388
Query: 916 ATMCSKPSMPEV-----SPGHHLVPLEKXXXXXXXXXXXXXXXTQDTPA----------S 1050
+ S + + G H+ PL+K T A S
Sbjct: 389 LPVPGVSSSATLQQQNRAAGQHITPLKKPLHSPQGLPLPLRPQTNFPGAQAPLQNPYAYS 448
Query: 1051 SKIQVSPFPVQQ------LGQLQIQTDDVPSTVSQRK-QCVPAIQQQSAKPLQQLADQSA 1209
S++ S P QQ Q + + P+TVS Q P QQQ + +Q + A
Sbjct: 449 SQLPTSQLPPQQNISRATAPQTPLNINLRPTTVSSATVQFPPRSQQQPLQKMQHPPSELA 508
Query: 1210 QIPAQQEQVLQGIFQSSQQAPSQGHEQLHLMQHSSQTPVEERKSGDGEQQ-----LQEAA 1374
Q+ +QQ Q LQ FQSSQQA SQ +Q+ MQ +Q + G+QQ + A
Sbjct: 509 QLLSQQTQSLQATFQSSQQAISQLQQQVQSMQQPNQNLPLSQNGRAGKQQWAGSAIPRVA 568
Query: 1375 RTAGTTSATLPTSETFSVRSQTAPPTCEWSEHNCPDGCKYYYNCITKESRWEKPNFSVTQ 1554
T G+T + + +V C W+EH PDG KYYYN +T ES+WEKP +
Sbjct: 569 STTGSTPVSYVQTAAPAVSQSVGSVKCTWTEHTSPDGFKYYYNGLTGESKWEKPEEMIVF 628
Query: 1555 SKEVQLQKTISDQQRLQIHQT 1617
+E Q Q+ ++ +Q QT
Sbjct: 629 EREQQKQQQHQEKPTIQQSQT 649