BLASTX nr result

ID: Coptis21_contig00006239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006239
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317351.1| multidrug resistance protein ABC transporter...   213   1e-53
ref|XP_002526609.1| mgatp-energized glutathione s-conjugate pump...   209   2e-52
ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2...   205   3e-51
ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2...   205   3e-51
emb|CBI30983.3| unnamed protein product [Vitis vinifera]              185   3e-45

>ref|XP_002317351.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222860416|gb|EEE97963.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1617

 Score =  213 bits (542), Expect = 1e-53
 Identities = 111/171 (64%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
 Frame = +3

Query: 3    QVLEFDAPGHLLLNEKSAFSKMVQSTGSANAQYLRSLVLR-EEENRLGREDAMQQDGXXX 179
            +VLE+D P  LL NE SAFSKMVQSTG+ANAQYLRSLV+  E E+RLGRE+  Q DG   
Sbjct: 1443 RVLEYDTPEELLSNENSAFSKMVQSTGAANAQYLRSLVMGGERESRLGREENKQLDGPRR 1502

Query: 180  XXXXXXXXXXXXXXXGVSLTSSQNDLQKLEIEDENNILKKTKDAVITLQGVLEGKHDKAI 359
                            VSLTSSQNDLQ+LEIEDEN++LKKTKDAV+TLQ VLEGKHDK I
Sbjct: 1503 WLASSRWAAAAQFALAVSLTSSQNDLQQLEIEDENSVLKKTKDAVVTLQRVLEGKHDKVI 1562

Query: 360  EDTLTQYQIPRGRWWSALYKVVEGLSMMSRLGRSRFQQLDYGLENRPINWD 512
            +++L QYQI R  WWSALYK+VEGL+MMSRLGR R  Q DYGLE++ I+W+
Sbjct: 1563 DESLNQYQISRDGWWSALYKMVEGLAMMSRLGRHRLHQSDYGLEDKTIDWN 1613


>ref|XP_002526609.1| mgatp-energized glutathione s-conjugate pump, putative [Ricinus
            communis] gi|223534049|gb|EEF35768.1| mgatp-energized
            glutathione s-conjugate pump, putative [Ricinus communis]
          Length = 1569

 Score =  209 bits (532), Expect = 2e-52
 Identities = 109/172 (63%), Positives = 129/172 (75%), Gaps = 1/172 (0%)
 Frame = +3

Query: 3    QVLEFDAPGHLLLNEKSAFSKMVQSTGSANAQYLRSLVLREE-ENRLGREDAMQQDGXXX 179
            +VLE+D P  LL NE SAFSKMVQSTG+ANAQYLR LVL  E E+R GRE+  + DG   
Sbjct: 1395 EVLEYDTPEELLSNEGSAFSKMVQSTGAANAQYLRGLVLGGEGESRFGREENKRLDGQRK 1454

Query: 180  XXXXXXXXXXXXXXXGVSLTSSQNDLQKLEIEDENNILKKTKDAVITLQGVLEGKHDKAI 359
                            VSLTSS NDLQ+LEI+DEN+IL+KTKDAVITLQGVLEGKHDK I
Sbjct: 1455 WMASSRWAAAAQFALAVSLTSSHNDLQRLEIDDENSILEKTKDAVITLQGVLEGKHDKVI 1514

Query: 360  EDTLTQYQIPRGRWWSALYKVVEGLSMMSRLGRSRFQQLDYGLENRPINWDD 515
            E++L Q+QI +  WWSALYK+VEGL+MMSRLGR+R  Q DYG ++R INWD+
Sbjct: 1515 EESLNQHQISKDGWWSALYKMVEGLAMMSRLGRNRLHQSDYGFDDRSINWDN 1566


>ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2 isoform 2 [Vitis
            vinifera]
          Length = 1616

 Score =  205 bits (522), Expect = 3e-51
 Identities = 108/171 (63%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
 Frame = +3

Query: 3    QVLEFDAPGHLLLNEKSAFSKMVQSTGSANAQYLRSLVLREE-ENRLGREDAMQQDGXXX 179
            +VLE+D P  LL N++SAFSKMVQSTG+ANA+YLRSLVL  E EN+LGRED  + DG   
Sbjct: 1443 RVLEYDTPEELLSNDRSAFSKMVQSTGAANAEYLRSLVLGGEGENKLGREDNRRLDGQRR 1502

Query: 180  XXXXXXXXXXXXXXXGVSLTSSQNDLQKLEIEDENNILKKTKDAVITLQGVLEGKHDKAI 359
                            VSLTSSQNDLQ+LEIEDEN+ILKKTKDAVITLQGVLEGKHDK I
Sbjct: 1503 WLASSRWTAAAQFALAVSLTSSQNDLQQLEIEDENSILKKTKDAVITLQGVLEGKHDKVI 1562

Query: 360  EDTLTQYQIPRGRWWSALYKVVEGLSMMSRLGRSRFQQLDYGLENRPINWD 512
            E+TL QYQ+ R  WWS+LY+++EGL++MSRL R+R Q  + G E+R I+WD
Sbjct: 1563 EETLNQYQVSRDGWWSSLYRMIEGLAVMSRLARNRLQS-ENGFEDRSIDWD 1612


>ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2 isoform 1 [Vitis
            vinifera] gi|297740795|emb|CBI30977.3| unnamed protein
            product [Vitis vinifera]
          Length = 1623

 Score =  205 bits (522), Expect = 3e-51
 Identities = 108/171 (63%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
 Frame = +3

Query: 3    QVLEFDAPGHLLLNEKSAFSKMVQSTGSANAQYLRSLVLREE-ENRLGREDAMQQDGXXX 179
            +VLE+D P  LL N++SAFSKMVQSTG+ANA+YLRSLVL  E EN+LGRED  + DG   
Sbjct: 1450 RVLEYDTPEELLSNDRSAFSKMVQSTGAANAEYLRSLVLGGEGENKLGREDNRRLDGQRR 1509

Query: 180  XXXXXXXXXXXXXXXGVSLTSSQNDLQKLEIEDENNILKKTKDAVITLQGVLEGKHDKAI 359
                            VSLTSSQNDLQ+LEIEDEN+ILKKTKDAVITLQGVLEGKHDK I
Sbjct: 1510 WLASSRWTAAAQFALAVSLTSSQNDLQQLEIEDENSILKKTKDAVITLQGVLEGKHDKVI 1569

Query: 360  EDTLTQYQIPRGRWWSALYKVVEGLSMMSRLGRSRFQQLDYGLENRPINWD 512
            E+TL QYQ+ R  WWS+LY+++EGL++MSRL R+R Q  + G E+R I+WD
Sbjct: 1570 EETLNQYQVSRDGWWSSLYRMIEGLAVMSRLARNRLQS-ENGFEDRSIDWD 1619


>emb|CBI30983.3| unnamed protein product [Vitis vinifera]
          Length = 1500

 Score =  185 bits (470), Expect = 3e-45
 Identities = 94/171 (54%), Positives = 123/171 (71%), Gaps = 1/171 (0%)
 Frame = +3

Query: 3    QVLEFDAPGHLLLNEKSAFSKMVQSTGSANAQYLRSLVLREE-ENRLGREDAMQQDGXXX 179
            QV+E+D P  LL +E S+FS+MV+STG+ANAQYLRSLV  E+ + + GRE+A Q D    
Sbjct: 1326 QVVEYDTPEELLQDEGSSFSRMVRSTGAANAQYLRSLVFGEDGQKKSGREEAKQLDRQKR 1385

Query: 180  XXXXXXXXXXXXXXXGVSLTSSQNDLQKLEIEDENNILKKTKDAVITLQGVLEGKHDKAI 359
                            +SLTSSQN LQ L++EDE NILKKT DAV+TL+GVLEG HD+ I
Sbjct: 1386 WLASSRWAAATQFALSISLTSSQNGLQFLDVEDEMNILKKTNDAVLTLRGVLEGTHDEVI 1445

Query: 360  EDTLTQYQIPRGRWWSALYKVVEGLSMMSRLGRSRFQQLDYGLENRPINWD 512
            E+ L +YQ+PR RWWSALYK+VEGL++M+RL R RFQQ ++  E+  ++WD
Sbjct: 1446 EEMLKEYQVPRDRWWSALYKMVEGLAVMNRLARHRFQQSEHDFEDTTLDWD 1496


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