BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006236
         (1529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251...   399   e-108
ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795...   394   e-107
ref|XP_004144716.1| PREDICTED: nucleoporin Nup43-like [Cucumis s...   391   e-106
ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]   387   e-105
ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|3...   371   e-100

>ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251872 [Vitis vinifera]
            gi|297743697|emb|CBI36580.3| unnamed protein product
            [Vitis vinifera]
          Length = 357

 Score =  399 bits (1024), Expect = e-108
 Identities = 206/347 (59%), Positives = 249/347 (71%), Gaps = 4/347 (1%)
 Frame = -1

Query: 1451 NLEIHKIPQSKYIDSIRWLPTVSAFDKFITMALYDSDSDENFVEIHSLNSSI---LTHQS 1281
            +L+IH++PQS+YID++R+LP  S  D+F  +AL+D+ S    ++IHSL  S    L  QS
Sbjct: 11   SLQIHRLPQSQYIDAVRFLPAFSGLDRFAVLALFDTHSSSPSLQIHSLPKSTPPSLNLQS 70

Query: 1280 SWAYPXXXXXXXXXXXXXKPVIAASTFQGSLHFLFVNPADMAIESELGLAEKGFCDGPIS 1101
            S +               KP+IAASTF GSLH L ++  D +++SE  + EK    G IS
Sbjct: 71   SLSLSSRVSSLSLSLSAHKPLIAASTFSGSLHILLLD-FDASVQSEFSVPEKSLHVGAIS 129

Query: 1100 GIDLVENGTKCVCVGGDGRVTLVTVGD-SRLEKDCVFDSQGLVSYNAAKWASPSEFATGG 924
             +DL E+G +CV VG DGRV LV  GD SRL    V+DS GLVSY AAKWASP+EFATGG
Sbjct: 130  CVDLQESGVECVSVGEDGRVNLVAFGDGSRLSYRRVWDSDGLVSYTAAKWASPTEFATGG 189

Query: 923  LGFSLQWWDQRKGGGPVSQFKGGWTSGGASGIVHSIDIHTSRKHICVAGGSLGTVFAWDL 744
             GF LQWWD RK GGPVSQFKG W     SGIVHSIDIH SRKH C+AGGSLGTVFAWDL
Sbjct: 190  FGFGLQWWDLRKPGGPVSQFKGNWAQRTTSGIVHSIDIHPSRKHTCLAGGSLGTVFAWDL 249

Query: 743  RWQQQPILLSGIGXXXXXXXXXXXXEVWEVQYDCYKQSTNVNSMSSAQILPVLMCSEDGI 564
            RWQQQPI+LSG+G            EVWEV+YD Y +++N  +MSS++ILP ++CSEDGI
Sbjct: 250  RWQQQPIILSGVGTSEVATHSPCESEVWEVKYDPYMRTSNFGNMSSSRILPAMLCSEDGI 309

Query: 563  LAVVEQGEEHFEVLAEPCAINSLDINPQNPSDVICSLEWESIAFITR 423
            LAVVEQGEE  E+LAEPCAINS DI+ QNPSDVICSLEWESIA ++R
Sbjct: 310  LAVVEQGEEPIELLAEPCAINSFDIDRQNPSDVICSLEWESIAILSR 356


>ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795073 [Glycine max]
          Length = 346

 Score =  394 bits (1013), Expect = e-107
 Identities = 200/343 (58%), Positives = 239/343 (69%), Gaps = 3/343 (0%)
 Frame = -1

Query: 1442 IHKIPQSKYIDSIRWLPTVSAFDKFITMALYDSDSDENFVEIHSLNSS--ILTHQSSWAY 1269
            I + PQ +Y+D++RWLP  SAFD+F  +AL+D DSD + +EIH+LN +   L   SSW+ 
Sbjct: 8    IQRFPQHRYVDAVRWLPLQSAFDRFAVLALFDFDSDASSIEIHALNQNPFSLEPHSSWSS 67

Query: 1268 PXXXXXXXXXXXXXKPVIAASTFQGSLHFLFVNPADMAIESELGLAEKGFCDGPISGIDL 1089
            P             KP+I AST  GSLHFLF + +D ++ SE+ L E      P S +DL
Sbjct: 68   PSRVSSLKPSHFLQKPLIVASTSSGSLHFLFSDSSDASLLSEVSLPEGALHSLPASCVDL 127

Query: 1088 VENGTKCVCVGGDGRVTLVTVGDSRLEKDCVFDSQGLVSYNAAKWASPSEFATGGLGFSL 909
            ++ G +CV VG DG+V LV +GDS L    +FDS GLVSY A +WASP EFATGG GF L
Sbjct: 128  MDGGVECVSVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVRWASPMEFATGGFGFGL 187

Query: 908  QWWDQRKGGGPVSQFKGGWTSGGASGIVHSIDIHTSRKHICVAGGSLGTVFAWDLRWQQQ 729
            QWWDQRK GGPVSQFKG W     SGIVHSIDIH SRKH C+AGGSLGTVFAWDLRWQQQ
Sbjct: 188  QWWDQRKPGGPVSQFKGNWDKKLTSGIVHSIDIHPSRKHTCLAGGSLGTVFAWDLRWQQQ 247

Query: 728  PILLSGIGXXXXXXXXXXXXEVWEVQYD-CYKQSTNVNSMSSAQILPVLMCSEDGILAVV 552
            PI+LSG G            EVWEVQYD C K +T     SS +ILP ++CSEDGIL V+
Sbjct: 248  PIILSGAGAANTAVQSISESEVWEVQYDRCIKSNT-----SSTRILPSMICSEDGILGVI 302

Query: 551  EQGEEHFEVLAEPCAINSLDINPQNPSDVICSLEWESIAFITR 423
            EQGEE  E+LAEPCAINS DI+  NPSDVICSLEWE++A +TR
Sbjct: 303  EQGEEPIELLAEPCAINSFDIDRHNPSDVICSLEWEAVAILTR 345


>ref|XP_004144716.1| PREDICTED: nucleoporin Nup43-like [Cucumis sativus]
            gi|449511548|ref|XP_004163987.1| PREDICTED: nucleoporin
            Nup43-like [Cucumis sativus]
          Length = 350

 Score =  391 bits (1005), Expect = e-106
 Identities = 194/343 (56%), Positives = 241/343 (70%), Gaps = 2/343 (0%)
 Frame = -1

Query: 1445 EIHKIPQSKYIDSIRWLPTVSAFDKFITMALYDSDSDENFVEIHSLNSSIL--THQSSWA 1272
            +IH+ PQ KY+D +RWLP +SAF +F  +AL+DSDSD + +EIHSL  + L     S+W 
Sbjct: 11   QIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWI 70

Query: 1271 YPXXXXXXXXXXXXXKPVIAASTFQGSLHFLFVNPADMAIESELGLAEKGFCDGPISGID 1092
             P              P++ AST+ GSLH L V P + +++SEL + EK   DGPIS +D
Sbjct: 71   SPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKMLHDGPISCVD 130

Query: 1091 LVENGTKCVCVGGDGRVTLVTVGDSRLEKDCVFDSQGLVSYNAAKWASPSEFATGGLGFS 912
            +++ G +C+ V  DGRV+LV+VG+S L    +FDS GLVSYNA KWASP+EF TGG GFS
Sbjct: 131  VMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFS 190

Query: 911  LQWWDQRKGGGPVSQFKGGWTSGGASGIVHSIDIHTSRKHICVAGGSLGTVFAWDLRWQQ 732
            LQWWDQRK GG VSQFK  W    ASGIVH IDIH SRKH C+AGGS GTVFAWDLR QQ
Sbjct: 191  LQWWDQRKPGGAVSQFKANW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQ 246

Query: 731  QPILLSGIGXXXXXXXXXXXXEVWEVQYDCYKQSTNVNSMSSAQILPVLMCSEDGILAVV 552
            QPI+LSG+             EVWEV YD Y +S N+  MSS QILP ++CSEDGIL  +
Sbjct: 247  QPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSEDGILTSI 306

Query: 551  EQGEEHFEVLAEPCAINSLDINPQNPSDVICSLEWESIAFITR 423
            EQG+E  E+LAEPCAIN  DIN Q+PS+VIC+LEWES+A ++R
Sbjct: 307  EQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSR 349


>ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]
          Length = 347

 Score =  387 bits (994), Expect = e-105
 Identities = 200/346 (57%), Positives = 238/346 (68%), Gaps = 6/346 (1%)
 Frame = -1

Query: 1442 IHKIPQSKYIDSIRWLPTVSAFDKFITMALYDSDSDENFVEIHSLNSSILTHQ--SSWAY 1269
            I + PQ KY+D++RWLP  SAFD+F  +AL+D DSD + +EIHSLN + L+ +  SSW+ 
Sbjct: 6    IQRFPQHKYVDAVRWLPLQSAFDRFAVLALFDFDSDASSIEIHSLNPNPLSLEPHSSWSS 65

Query: 1268 PXXXXXXXXXXXXXKPVIAASTFQGSLHFLFVNPADMAIESELGLAEKGFCDGPISGIDL 1089
            P             KP+I AST  GSLHFLF + +   +ESE+ + E      P S +DL
Sbjct: 66   PSRVSSLKASHFLQKPLIVASTSSGSLHFLFSDSSVATLESEVSIPEGALHSVPASCVDL 125

Query: 1088 VENGTKCVCVGGDGRVTLVTVGDSRLEKDCVFDSQGLVSYNAAKWASPSEFATGGLGFSL 909
            ++ G +CV VG DG+V LV +GDS L    +FDS GLVSY A  WASP EFATGG GF L
Sbjct: 126  LDGGVECVTVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVSWASPMEFATGGYGFGL 185

Query: 908  QWWDQRKGGGPVSQFKGGWTSGGASGIVHSIDIHTSRKHICVAGGSLGTVFAWDLRWQQQ 729
             WWDQRK GGPVSQFKG W     SGIVHSIDIH SRKH C+AGGSLGTVFAWDLRWQQQ
Sbjct: 186  HWWDQRKPGGPVSQFKGNWDKKLTSGIVHSIDIHPSRKHTCLAGGSLGTVFAWDLRWQQQ 245

Query: 728  PILLSGIG---XXXXXXXXXXXXEVWEVQYD-CYKQSTNVNSMSSAQILPVLMCSEDGIL 561
            PI+LSG G               EVWEVQYD C K +T     SS +ILP ++CSEDGIL
Sbjct: 246  PIILSGAGAGAGGNTAVQSISESEVWEVQYDRCIKPNT-----SSTRILPSMICSEDGIL 300

Query: 560  AVVEQGEEHFEVLAEPCAINSLDINPQNPSDVICSLEWESIAFITR 423
             V+EQGEE  E+LAEPCAINS DI+  NPSDVICSLEWE++A +TR
Sbjct: 301  GVIEQGEEPIELLAEPCAINSFDIDRHNPSDVICSLEWEAVAILTR 346


>ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|355511317|gb|AES92459.1|
            Nucleoporin Nup43 [Medicago truncatula]
          Length = 351

 Score =  371 bits (953), Expect = e-100
 Identities = 198/353 (56%), Positives = 233/353 (66%), Gaps = 7/353 (1%)
 Frame = -1

Query: 1460 VPENLEIHKIPQSKYIDSIRWLPTVSAFDKFITMALYDSDSDENFVEIHSLNSSILTH-- 1287
            V  N EIH+ PQ KYID++RWLP +SAF++F  +A  D DS+ + +EIHS   + L+   
Sbjct: 3    VTANSEIHRFPQYKYIDAVRWLPVLSAFNRFAVLATSDFDSNLSSIEIHSFKPNPLSFEF 62

Query: 1286 QSSWAYPXXXXXXXXXXXXXKPVIAASTFQGSLHFLFVNPADMAIESELGLAEKGFCDGP 1107
            QSSW  P             K +IA+ST  GSLHFLF +  D  + SE+ + E       
Sbjct: 63   QSSWTSPSPISSIKSSQFLQKSIIASSTSSGSLHFLFADSTDARLVSEVSVPENELHLEG 122

Query: 1106 ISGIDLVENGTKCVCVGGDGRVTLVTVGDSRLEKDCVFDSQGLVSYNAAKWASPSEFATG 927
               IDL++ G +CV VG DGR+ LVTVGDS L    +FDS GLVSY + KWASP EFATG
Sbjct: 123  KCCIDLMDGGVECVTVGDDGRINLVTVGDSNLNYRRLFDSGGLVSYTSVKWASPVEFATG 182

Query: 926  GLGFSLQWWDQRKGGGPVSQFKGGWTSGGASGIVHSIDIHTSRKHICVAGGSLGTVFAWD 747
            G GF L WWDQRK GGPVSQFKG W     SGIVHSIDIH SRKH C+A GSLGTV AWD
Sbjct: 183  GYGFGLHWWDQRKPGGPVSQFKGNWDKNLNSGIVHSIDIHPSRKHTCLAAGSLGTVLAWD 242

Query: 746  LRWQQQPILLSGI----GXXXXXXXXXXXXEVWEVQYD-CYKQSTNVNSMSSAQILPVLM 582
            LR QQQPI+LSG     G            EVWEVQYD C K +T     SS +ILP ++
Sbjct: 243  LRMQQQPIILSGTGAGDGAGNTAVQSISESEVWEVQYDRCIKSNT-----SSTRILPAMI 297

Query: 581  CSEDGILAVVEQGEEHFEVLAEPCAINSLDINPQNPSDVICSLEWESIAFITR 423
            CSEDGIL V+EQGEE  E+LAEPCAINS DI+  NP DVICSLEWES+A +TR
Sbjct: 298  CSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPLDVICSLEWESVAILTR 350