BLASTX nr result

ID: Coptis21_contig00006232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006232
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267975.1| PREDICTED: cell number regulator 6 isoform 1...   397   e-108
ref|XP_002510957.1| conserved hypothetical protein [Ricinus comm...   387   e-105
emb|CBI16603.3| unnamed protein product [Vitis vinifera]              382   e-104
ref|XP_002277735.1| PREDICTED: cell number regulator 6 [Vitis vi...   380   e-103
ref|XP_002304409.1| predicted protein [Populus trichocarpa] gi|2...   379   e-103

>ref|XP_002267975.1| PREDICTED: cell number regulator 6 isoform 1 [Vitis vinifera]
           gi|296084213|emb|CBI24601.3| unnamed protein product
           [Vitis vinifera]
          Length = 239

 Score =  397 bits (1019), Expect = e-108
 Identities = 174/237 (73%), Positives = 203/237 (85%), Gaps = 2/237 (0%)
 Frame = +1

Query: 13  MSDGNVQSRYVKLTKDQDAGSIDEIRPGELNQPVQVPQLDVRRCNECGQTLPDSYEPPKD 192
           M++G V SRYVKLTKDQ  G ++EI+PGELNQP+ VPQL+VR+CNECGQ LP+SYEPP +
Sbjct: 1   MAEGAVHSRYVKLTKDQ--GPVEEIKPGELNQPIDVPQLNVRKCNECGQPLPESYEPPAN 58

Query: 193 EPWTTGIFGCAEDTDSCWTGLFCPCVLFGRNVENLREDIPWTNTCICHAICVEGGIXXXX 372
           EPWTTGIFGCAEDT+SCWTGLFCPCVLFGRN+E+LRED PWT  CICHAIC+EGGI    
Sbjct: 59  EPWTTGIFGCAEDTESCWTGLFCPCVLFGRNIESLREDTPWTTPCICHAICIEGGIALAI 118

Query: 373 XXXIFHGVDPKTSFLIGESLLFAWWMCGIYTGLFRQSLQKKYHLKDSPCDPCAVHCCLHW 552
              +FHG+DP+TSFLI E LLFAWWMCGIYTGL RQSLQKKYHL++SPCDPC VHCC+HW
Sbjct: 119 GTGVFHGIDPRTSFLICEGLLFAWWMCGIYTGLVRQSLQKKYHLQNSPCDPCMVHCCMHW 178

Query: 553 CALCQEHREMKSRLSDNAVMPMTVINPPPIQEMTSAEN--QESPRASTNGTELANLE 717
           CALCQEHREMK RLS++ VMPMT++NPPP+QEM S EN  Q++  +S  GTE  +LE
Sbjct: 179 CALCQEHREMKGRLSEDLVMPMTIVNPPPVQEMNSEENNQQDAAPSSAKGTEHTHLE 235


>ref|XP_002510957.1| conserved hypothetical protein [Ricinus communis]
           gi|223550072|gb|EEF51559.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 236

 Score =  387 bits (993), Expect = e-105
 Identities = 167/232 (71%), Positives = 200/232 (86%), Gaps = 1/232 (0%)
 Frame = +1

Query: 13  MSDGNVQSRYVKLTKDQDAGSIDEIRPGELNQPVQVPQLDVRRCNECGQTLPDSYEPPKD 192
           M++ +  SRYVKLTK+Q A  I++I+PGELNQP++VPQL+VR+CNECGQ LP+++EPP D
Sbjct: 2   MAEASAHSRYVKLTKEQAA--IEDIKPGELNQPIEVPQLNVRKCNECGQPLPENFEPPAD 59

Query: 193 EPWTTGIFGCAEDTDSCWTGLFCPCVLFGRNVENLREDIPWTNTCICHAICVEGGIXXXX 372
           EPWTTGIFGC EDT+SCWTGLFCPCVLFGRNVE+LR+D PWT  CICHA+C+EGG+    
Sbjct: 60  EPWTTGIFGCTEDTESCWTGLFCPCVLFGRNVESLRDDTPWTTPCICHAVCIEGGMALAA 119

Query: 373 XXXIFHGVDPKTSFLIGESLLFAWWMCGIYTGLFRQSLQKKYHLKDSPCDPCAVHCCLHW 552
              IFHGVDP+TSFL+ E LLFAWWMCGIYTGL RQSLQ+KYHL++SPCDPC VHCC+HW
Sbjct: 120 ATAIFHGVDPRTSFLVCEGLLFAWWMCGIYTGLVRQSLQRKYHLRNSPCDPCMVHCCMHW 179

Query: 553 CALCQEHREMKSRLSDNAVMPMTVINPPPIQEMTSA-ENQESPRASTNGTEL 705
           CALCQEHREMK RLSDN VMPMT++NPPP+QEM SA +N++S  +S  GT L
Sbjct: 180 CALCQEHREMKGRLSDNFVMPMTIVNPPPVQEMNSASDNRDSEPSSEKGTNL 231


>emb|CBI16603.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  382 bits (982), Expect = e-104
 Identities = 168/237 (70%), Positives = 194/237 (81%), Gaps = 1/237 (0%)
 Frame = +1

Query: 10  KMSDGNVQS-RYVKLTKDQDAGSIDEIRPGELNQPVQVPQLDVRRCNECGQTLPDSYEPP 186
           KMS+G  QS RYVKL KDQ    +++I PGELNQP++VPQL V RCNECGQ LP+SY+PP
Sbjct: 39  KMSEGIAQSSRYVKLKKDQ--APVEDITPGELNQPIEVPQLIVHRCNECGQPLPESYQPP 96

Query: 187 KDEPWTTGIFGCAEDTDSCWTGLFCPCVLFGRNVENLREDIPWTNTCICHAICVEGGIXX 366
            DE WTTGI GCAED +SCWTGLFCPCVLFG NVE LREDIPWTN C+CHA+CVEGG+  
Sbjct: 97  ADEDWTTGICGCAEDRESCWTGLFCPCVLFGHNVEQLREDIPWTNACVCHALCVEGGMTL 156

Query: 367 XXXXXIFHGVDPKTSFLIGESLLFAWWMCGIYTGLFRQSLQKKYHLKDSPCDPCAVHCCL 546
                +FHG+DPKTSFLI E LLF WWMCGIYTGLFRQSLQK+YHLK+SPCDPC VHCC+
Sbjct: 157 AAATALFHGIDPKTSFLICEGLLFTWWMCGIYTGLFRQSLQKQYHLKNSPCDPCLVHCCM 216

Query: 547 HWCALCQEHREMKSRLSDNAVMPMTVINPPPIQEMTSAENQESPRASTNGTELANLE 717
           HWCA+CQEHREMK  LS N+ MPMT++NPPP+QEM +  NQE+  +S NGTE   +E
Sbjct: 217 HWCAICQEHREMKGHLSSNSAMPMTIVNPPPVQEMDAGGNQEAAPSSKNGTEHTTME 273


>ref|XP_002277735.1| PREDICTED: cell number regulator 6 [Vitis vinifera]
          Length = 238

 Score =  380 bits (977), Expect = e-103
 Identities = 167/236 (70%), Positives = 193/236 (81%), Gaps = 1/236 (0%)
 Frame = +1

Query: 13  MSDGNVQS-RYVKLTKDQDAGSIDEIRPGELNQPVQVPQLDVRRCNECGQTLPDSYEPPK 189
           MS+G  QS RYVKL KDQ    +++I PGELNQP++VPQL V RCNECGQ LP+SY+PP 
Sbjct: 1   MSEGIAQSSRYVKLKKDQ--APVEDITPGELNQPIEVPQLIVHRCNECGQPLPESYQPPA 58

Query: 190 DEPWTTGIFGCAEDTDSCWTGLFCPCVLFGRNVENLREDIPWTNTCICHAICVEGGIXXX 369
           DE WTTGI GCAED +SCWTGLFCPCVLFG NVE LREDIPWTN C+CHA+CVEGG+   
Sbjct: 59  DEDWTTGICGCAEDRESCWTGLFCPCVLFGHNVEQLREDIPWTNACVCHALCVEGGMTLA 118

Query: 370 XXXXIFHGVDPKTSFLIGESLLFAWWMCGIYTGLFRQSLQKKYHLKDSPCDPCAVHCCLH 549
               +FHG+DPKTSFLI E LLF WWMCGIYTGLFRQSLQK+YHLK+SPCDPC VHCC+H
Sbjct: 119 AATALFHGIDPKTSFLICEGLLFTWWMCGIYTGLFRQSLQKQYHLKNSPCDPCLVHCCMH 178

Query: 550 WCALCQEHREMKSRLSDNAVMPMTVINPPPIQEMTSAENQESPRASTNGTELANLE 717
           WCA+CQEHREMK  LS N+ MPMT++NPPP+QEM +  NQE+  +S NGTE   +E
Sbjct: 179 WCAICQEHREMKGHLSSNSAMPMTIVNPPPVQEMDAGGNQEAAPSSKNGTEHTTME 234


>ref|XP_002304409.1| predicted protein [Populus trichocarpa] gi|222841841|gb|EEE79388.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  379 bits (973), Expect = e-103
 Identities = 165/232 (71%), Positives = 197/232 (84%), Gaps = 1/232 (0%)
 Frame = +1

Query: 13  MSDGNVQSRYVKLTKDQDAGSIDEIRPGELNQPVQVPQLDVRRCNECGQTLPDSYEPPKD 192
           M++GNV SRYVKLTK+Q    ++EI+PGELNQP++VP L+V +CNECGQ LP++++PP D
Sbjct: 1   MAEGNV-SRYVKLTKEQTG--VEEIKPGELNQPIEVPHLEVCKCNECGQPLPENFQPPAD 57

Query: 193 EPWTTGIFGCAEDTDSCWTGLFCPCVLFGRNVENLREDIPWTNTCICHAICVEGGIXXXX 372
           EPWTTGIFGCAEDT+SCWTGLFCPCVLFGRN+E+LR+D PWT  C+CHA+CVEGGI    
Sbjct: 58  EPWTTGIFGCAEDTESCWTGLFCPCVLFGRNIESLRDDTPWTTPCVCHAVCVEGGIALAA 117

Query: 373 XXXIFHGVDPKTSFLIGESLLFAWWMCGIYTGLFRQSLQKKYHLKDSPCDPCAVHCCLHW 552
              +FHG++P T FLI E LLFAWWMCGIYTGL RQSLQKKYHLK+SPCDPC VHCC+HW
Sbjct: 118 ATAVFHGINPDTPFLICEGLLFAWWMCGIYTGLVRQSLQKKYHLKNSPCDPCMVHCCMHW 177

Query: 553 CALCQEHREMKSRLSDNAVMPMTVINPPPIQEMT-SAENQESPRASTNGTEL 705
           CALCQEHREMK RLSDN VMPMT++NPPP+QEM+ + ENQ+S  +S   T L
Sbjct: 178 CALCQEHREMKGRLSDNFVMPMTIVNPPPVQEMSATTENQDSTPSSEKSTSL 229


Top