BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006230
         (1055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003577363.1| PREDICTED: DNA repair protein RAD51 homolog ...   122   2e-27
gb|ACM47238.1| RAD51 recombination protein [Triticum aestivum]        120   4e-27
gb|ACH42252.1| RAD51A recombination protein [Triticum aestivum] ...   120   4e-27
ref|XP_002449862.1| hypothetical protein SORBIDRAFT_05g024565 [S...   120   4e-27
gb|ACH42253.1| RAD51A recombination protein [Triticum aestivum]       120   4e-27

>ref|XP_003577363.1| PREDICTED: DNA repair protein RAD51 homolog B-like [Brachypodium
           distachyon]
          Length = 340

 Score =  122 bits (305), Expect(2) = 2e-27
 Identities = 59/68 (86%), Positives = 62/68 (91%)
 Frame = -3

Query: 933 ASKLVPLGFNSASNIHAQRLEIIQITTGSRELDKILEGGIETSSIT*LYGEFCGGKTQLC 754
           ASKLVPLGF SAS +HAQRLEIIQ+TTGSRELDKILEGGIET SIT LYGEF  GKTQLC
Sbjct: 79  ASKLVPLGFTSASQLHAQRLEIIQVTTGSRELDKILEGGIETGSITELYGEFRSGKTQLC 138

Query: 753 HTLCITCQ 730
           HTLC+TCQ
Sbjct: 139 HTLCVTCQ 146



 Score = 27.7 bits (60), Expect(2) = 2e-27
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -2

Query: 700 QFPLDQGGGHGKA 662
           Q PLDQGGG GKA
Sbjct: 146 QLPLDQGGGEGKA 158


>gb|ACM47238.1| RAD51 recombination protein [Triticum aestivum]
          Length = 343

 Score =  120 bits (302), Expect(2) = 4e-27
 Identities = 58/68 (85%), Positives = 62/68 (91%)
 Frame = -3

Query: 933 ASKLVPLGFNSASNIHAQRLEIIQITTGSRELDKILEGGIETSSIT*LYGEFCGGKTQLC 754
           ASKLVPLGF SA+ +HAQRLEIIQ+TTGSRELDKILEGGIET SIT LYGEF  GKTQLC
Sbjct: 82  ASKLVPLGFTSATQLHAQRLEIIQVTTGSRELDKILEGGIETGSITELYGEFRSGKTQLC 141

Query: 753 HTLCITCQ 730
           HTLC+TCQ
Sbjct: 142 HTLCVTCQ 149



 Score = 27.7 bits (60), Expect(2) = 4e-27
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -2

Query: 700 QFPLDQGGGHGKA 662
           Q PLDQGGG GKA
Sbjct: 149 QLPLDQGGGEGKA 161


>gb|ACH42252.1| RAD51A recombination protein [Triticum aestivum]
           gi|222154121|gb|ACM47240.1| RAD51 recombination protein
           [Triticum aestivum]
          Length = 342

 Score =  120 bits (302), Expect(2) = 4e-27
 Identities = 58/68 (85%), Positives = 62/68 (91%)
 Frame = -3

Query: 933 ASKLVPLGFNSASNIHAQRLEIIQITTGSRELDKILEGGIETSSIT*LYGEFCGGKTQLC 754
           ASKLVPLGF SA+ +HAQRLEIIQ+TTGSRELDKILEGGIET SIT LYGEF  GKTQLC
Sbjct: 81  ASKLVPLGFTSATQLHAQRLEIIQVTTGSRELDKILEGGIETGSITELYGEFRSGKTQLC 140

Query: 753 HTLCITCQ 730
           HTLC+TCQ
Sbjct: 141 HTLCVTCQ 148



 Score = 27.7 bits (60), Expect(2) = 4e-27
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -2

Query: 700 QFPLDQGGGHGKA 662
           Q PLDQGGG GKA
Sbjct: 148 QLPLDQGGGEGKA 160


>ref|XP_002449862.1| hypothetical protein SORBIDRAFT_05g024565 [Sorghum bicolor]
           gi|241935705|gb|EES08850.1| hypothetical protein
           SORBIDRAFT_05g024565 [Sorghum bicolor]
          Length = 340

 Score =  120 bits (301), Expect(2) = 4e-27
 Identities = 57/68 (83%), Positives = 62/68 (91%)
 Frame = -3

Query: 933 ASKLVPLGFNSASNIHAQRLEIIQITTGSRELDKILEGGIETSSIT*LYGEFCGGKTQLC 754
           ASK+VPLGF SAS +HAQRLEIIQ+TTGSRELDKILEGGIET SIT +YGEF  GKTQLC
Sbjct: 76  ASKIVPLGFTSASQLHAQRLEIIQVTTGSRELDKILEGGIETGSITEIYGEFRSGKTQLC 135

Query: 753 HTLCITCQ 730
           HTLC+TCQ
Sbjct: 136 HTLCVTCQ 143



 Score = 28.1 bits (61), Expect(2) = 4e-27
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -2

Query: 700 QFPLDQGGGHGKANF 656
           Q PLDQGGG GKA +
Sbjct: 143 QLPLDQGGGEGKAMY 157


>gb|ACH42253.1| RAD51A recombination protein [Triticum aestivum]
          Length = 316

 Score =  120 bits (302), Expect(2) = 4e-27
 Identities = 58/68 (85%), Positives = 62/68 (91%)
 Frame = -3

Query: 933 ASKLVPLGFNSASNIHAQRLEIIQITTGSRELDKILEGGIETSSIT*LYGEFCGGKTQLC 754
           ASKLVPLGF SA+ +HAQRLEIIQ+TTGSRELDKILEGGIET SIT LYGEF  GKTQLC
Sbjct: 82  ASKLVPLGFTSATQLHAQRLEIIQVTTGSRELDKILEGGIETGSITELYGEFRSGKTQLC 141

Query: 753 HTLCITCQ 730
           HTLC+TCQ
Sbjct: 142 HTLCVTCQ 149



 Score = 27.7 bits (60), Expect(2) = 4e-27
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -2

Query: 700 QFPLDQGGGHGKA 662
           Q PLDQGGG GKA
Sbjct: 149 QLPLDQGGGEGKA 161